ORCID Profile
0000-0002-3416-4295
Current Organisation
Government of Western Australia Department of Primary Industries and Regional Development
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Publisher: Hindawi Limited
Date: 19-12-2017
DOI: 10.1111/JAI.13601
Publisher: Science Alert
Date: 15-02-2015
Publisher: Elsevier BV
Date: 09-2020
Publisher: Public Library of Science (PLoS)
Date: 12-11-2020
DOI: 10.1371/JOURNAL.PONE.0242079
Abstract: The present study investigates if the total replacement of dietary fishmeal (FM) with poultry by-product meal (PBM), supplemented with methionine influences the muscle fatty acids composition, normal gut morphology, histological traits of the liver, muscle, and gill, liver enzymes, immune and antioxidant response, and stress-related gene in juvenile barramundi, Lates calcarifer in relation to growth and feed utilization. Barramundi (3.58±0.01g) were randomly distributed into six 300 L seawater recirculating tanks (25 fish/tank) and fed two formulated isonitrogenous and isolipidic diets for 6 weeks. The control diet had FM as the sole animal protein source, whereas other test diet had only PBM as an animal protein source. Dietary PBM affected the fish performance and feed utilization. Regarding muscle fatty acid profile, total saturated fatty acids and monounsaturated fatty acids elevated while total PUFA particularly n-3 LC-PUFA and EPA decreased in PBM fed fish than control diet fed fish. Liver, muscle, gill, and intestinal histology showed no obvious alteration in control diet fed fish, however, more lipid droplets and hepatic vacuolization in the liver, necrotic myotome in muscle, hyperplasia in secondary lamellae in gill and short and broken folds in the intestine were observed in PBM fed fish. Similar to light microscopy observation of intestinal morphology, the transmission electron microscopy (TEM) analysis revealed shorter and smaller microvilli in fish fed PBM. Histopathological alterations in the liver of PBM fed fish were further associated with the elevated levels of aspartate aminotransferase (AST) and glutamate dehydrogenase (GLDH) and the significant upregulation of stress-related genes, HSP70 and HSP90. Also, a negative influence on lysozyme activity, and antioxidant enzymatic activities were recorded in fish fed PBM. Overall, it can be concluded that a total substitution of FM protein by methionine supplemented PBM negatively influenced the growth performance, liver health, histological traits of different organs, immune and antioxidant response, and expression of stress-related genes in juvenile barramundi.
Publisher: Elsevier BV
Date: 09-2020
Publisher: Hindawi Limited
Date: 08-2017
DOI: 10.1111/JAI.13448
Publisher: Hindawi Limited
Date: 20-05-2018
DOI: 10.1111/JAI.13728
Publisher: Elsevier BV
Date: 12-2020
Publisher: Science Alert
Date: 15-12-2017
Publisher: Hindawi Limited
Date: 14-08-2017
DOI: 10.1111/JAI.13462
Publisher: Wiley
Date: 07-02-2019
DOI: 10.1111/JFD.12954
Abstract: Aerolysin (aer) is one of the most important and abundant virulence factors in the infection of fish by Aeromonas veronii. A comprehensive study on the molecular characterization and pathogenicity of the aer gene from 34 A. veronii isolates from diseased carp and catfish was carried out and its interactome was analysed to observe the functional correlations between aer and other proteins within the A. veronii network. The PCR-based lification of aer from the 34 isolates of A. veronii showed more aer-positive isolates from catfish with a high pathogenic potential in the in vivo challenge test than the carp fish. The analysis of aer gene sequence from challenged fish revealed significant sequence ergence according to the types and geographical distribution of the fish. The networking analysis of aer from the model A. veronii B565 revealed histidine kinase (cheA) as the most functional interacting partner. The study of the interaction between aer from the experimental A. veronii and cheA demonstrated that the A chain of cheA plays a more important role than the corresponding B chain during contact, and a linker sequence of 15 residues controlled the entire interaction process. Therefore, cheA could be an excellent drug target for controlling A. veronii infection of fish.
Publisher: Springer Science and Business Media LLC
Date: 27-03-2019
Publisher: OMICS Publishing Group
Date: 2016
Publisher: Elsevier BV
Date: 02-2020
DOI: 10.1016/J.FSI.2019.12.057
Abstract: The present study investigated the supplemental effects of tuna hydrolysate (TH) in poultry by-product meal (PBM) and dietary fishmeal (FM) diets on antioxidant enzymatic activities, gut microbial communities and expression of cytokine genes in the distal intestine of juvenile barramundi, Lates calcarifer. Fish were fed with fermented (FPBM + TH) as well as non-fermented PBM (PBM + TH) and FM (FMBD + TH) diets with 10% TH supplementation for 10 weeks. A basal diet prepared without TH supplementation served as control. The results showed that the activity of glutathione peroxidase was significantly higher in FPBM + TH than the control, while the malondialdehyde and catalase activities were unchanged. FPBM + TH diet significantly (P < 0.05) upregulated the pro-inflammatory cytokines including IL-1β and TNF-α while considerable downregulation (P < 0.05) was observed in the mRNA expression levels of anti-inflammatory cytokine, IL-10 in the distal intestine of fish. The 16SrRNA analysis using V3-V4 region evidenced the ability of FPBM + TH to modulate the distal intestinal gut microbiome, augmenting the richness of Firmicutes and Fusobacteriaat at phylum level and Bacillus, Lactococcus and Cetobacterium at genus level. All these results have shown that fermented PBM with TH supplementation could improve the antioxidant capacity and inflammatory responses of juvenile barramundi while influencing the microbial communities at both phylum and genera levels.
Publisher: Springer Science and Business Media LLC
Date: 10-2016
Publisher: Hindawi Limited
Date: 09-09-2016
DOI: 10.1111/JAI.13181
Publisher: Elsevier BV
Date: 12-2015
Publisher: Elsevier BV
Date: 11-2020
Publisher: Elsevier BV
Date: 10-2021
Publisher: MDPI AG
Date: 12-01-2023
Abstract: The physicochemical quality and shelf-life of fillets from barramundi, which were fed for 56 days on a mixture of poultry by-product meal (PBM), full-fat Hermetia illucens (FHI), and defatted HI (DHI), were investigated and compared to a fishmeal (FM) control diet. The proximate and total amino acids compositions of the fillets were unaffected by the test diets, while the mixture of PBM and HI larvae improved the sensory quality. An eight-day shelf-life study showed that PBM-HI-based diets improved the texture profile based upon the chewiness, cohesiveness, gumminess, and hardness, regardless of the storage time. The improved texture was aligned with comparatively less degradation of the microstructure of the muscle tissue in the same diets. An improvement in the quality index (QI) value, an increase in pH, and a decrease in lipid oxidation were also found in the fillets of barramundi fed test diets compared with the control diet during the storage time. The test diets positively influenced flesh lightness and redness, while the color profiles were negatively influenced by the storage time. Overall, the maintenance of compositional attributes the enhancement of fillet sensory attributes, texture, and brightness and the improved raw fillet shelf-life support the inclusion of PBM-HI-based diets in aquafeed.
Publisher: Walter de Gruyter GmbH
Date: 2015
DOI: 10.14798/73.4.848
Publisher: Elsevier BV
Date: 2019
Publisher: OMICS Publishing Group
Date: 2016
Publisher: MDPI AG
Date: 03-11-2022
Abstract: The present study evaluated the impacts of powdered Astragalus membranaceus extract (AME) on the growth, physiological responses, and serum immunity of Pangasianodon hypophthalmus juveniles. Four test diets were formulated to include varying AME levels as 0.0 (control), 1.5 (AME1.5), 3.0 (AME3.0), and 4.5 (AME4.5) g/kg. Fish weighing approximately 11.50 g were stocked into four triplicate groups and hand-fed on the test diets three times daily for two months. At 60 days post-feeding, the growth performance, including weight gain and the specific growth rate, was increased quadratically (R2 0.90) with increasing AME inclusion levels. An improvement in the feed intake and feed conversion ratio were also noticed in groups fed at different AME levels. The whole-body and amino acid composition were unaffected by the test diets. A significant quadratic trend in the digestive enzymes (lipase, α-amylase, and protease) was found along with increasing AME inclusion levels. Liver enzymes associated with liver functions were improved by AME dietary inclusion levels. Meanwhile, the blood urea nitrogen, uric acid, and creatinine values were unaffected by AME dietary inclusion. On the other hand, serum immunity (lysozyme and total Igs) was elevated with a significant quadratic trend along with increasing AME dietary inclusion levels. Liver MDA levels decreased with increasing AME levels. Liver CAT, GPx, and SOD enzyme activities demonstrated a significant increasing trend along with dietary AME inclusion. The aforementioned effects of dietary AME on P. hypophthalmus health underpinned the potentiality of AME to be used as a phyto-additive to improve the functionality of aquafeed.
Publisher: Frontiers Media SA
Date: 14-01-2021
Abstract: A 6-week feeding trial was performed to examine the effects of supplementing Hermetia illucens (HI) larvae meal when fishmeal (FM) was replaced with poultry by-product meal (PBM) in juvenile barramundi, Lates calcarifer diet. The effect was evaluated in terms of barramundi growth, filet quality, internal tissue structure, serum biochemistry, skin neutral mucins, immune response, and resistance to Vibrio harveyi . Three isonitrogenous (48% crude protein) and isolipidic (18% crude lipid) diets: an FM-based diet (control) and two diets containing 60 and 75% of PBM supplemented with 10% HI larvae (60PBM + HI and 75PBM + HI) were formulated. A total of 225 barramundi, with an average weight of 15.87 ± 0.14 g, were randomly distributed into nine tanks, each holding 25 fish. There were no significant effects of test diets on growth, but feeding HI-supplemented PBM diets significantly increased the survival rate. A significantly reduced intraperitoneal fat index in HI-supplemented-PBM-fed fish was correlated to a decreased size of peritoneal adipocytes. The observation of no histopathological alteration of the liver in the HI-supplemented-PBM-fed fish was further supported by significant alterations in serum biochemistry, in particular, a decreasing tendency of alanine transaminase, glutamate dehydrogenase, and total bilirubin. A 14-day challenge with V. harveyi indicated that HI-supplemented PBM diets reduced the infection rate in barramundi. After 24 h of infection, increased serum (lysozyme) and skin barrier functions, down-regulation of interleukin-1beta, and upregulation of interleukin-10 were found in HI-supplemented-PBM-fed fish.
Publisher: PeerJ
Date: 27-08-2019
DOI: 10.7717/PEERJ.7553
Abstract: This study aimed to investigate the effects of Clostridium butyricum as a dietary probiotic supplement in fishmeal based diet on growth, gut microbiota and immune performance of marron ( Cherax cainii ). Marron were randomly distributed into two different treatment groups, control and probiotic fed group. After 42 days of feeding trial, the results revealed a significant ( P 0.05) increase in growth due to increase in number of moults in marron fed probiotics. The probiotic diet also significantly enhanced the total haemocyte counts (THC), lysozyme activity in the haemolymph and protein content of the tail muscle in marron. Compared to control, the 16S rRNA sequences data demonstrated an enrichment of bacterial ersity in the probiotic fed marron where significant increase of Clostridium abundance was observed. The abundance for crayfish pathogen Vibrio and Aeromonas were found to be significantly reduced post feeding with probiotic diet. Predicted metabolic pathway revealed an increased activity for the metabolism and absorption of carbohydrate, degradation of amino acid, fatty acid and toxic compounds, and biosynthesis of secondary metabolites. C. butyricum supplementation also significantly modulated the expression level of immune-responsive genes of marron post challenged with Vibrio mimicus . The overall results suggest that C. butyricum could be used as dietary probiotic supplement in marron aquaculture.
Publisher: Oxford University Press (OUP)
Date: 19-03-2019
DOI: 10.1111/LAM.13125
Abstract: This study aimed to characterize the bacterial communities in rearing water treated with commercial plastic biological ball filters named as Bio-ball in marron culture for 60 days. Inclusion of Bio-ball in the aquaculture tanks showed improvement in water quality parameters and enrichment of bacterial communities in terms of operational taxonomic units. The water treated with Bio-ball showed significantly less nitrate, nitrite, ammonia, phosphorus and high dissolved oxygen concentration than untreated control group. At phylum level, Proteobacteria was dominant in both control and treated water, whereas Firmicutes was found to be significantly (P < 0·05) enriched in Bio-ball treated water. Among the classified genus, Aquabacterium and Polunucleobacter were most dominant in control and Bio-ball treated water respectively. Linear Discriminant Analysis Effect Size exhibited 31 indicator bacterial genus, 10 in control and 21 in treated condition, suggesting the enrichment of microbial lineages with addition of Bio-ball. The bacteria Haliscomenobacter, Hypnocyclicus, Pajaroellobacter and Vibrio were found to be significantly (P < 0·001) correlated with higher pH, nitrate, nitrite, phosphorus and ammonia in control tanks, whereas Corynebacterium was linked to higher temperature in treated water. Overall results suggest that Bio-ball filter media significantly improved the water quality and microbial populations in aquaculture tanks. SIGNIFICANCE AND IMPACT OF THE STUDY: The results of this study revealed the positive impacts of Bio-ball in enrichment of microbial flora associated with the degradation process of nitrogenous and organic compounds. Bio-ball also showed the capability to prevent the colonization of harmful bacteria, and favoured the growth of beneficial microbes in aquatic system. This study therefore could pave the ways of increasing the aquaculture production by improving the water quality.
Publisher: Springer Science and Business Media LLC
Date: 26-04-2016
Publisher: Hindawi Limited
Date: 19-12-2017
DOI: 10.1111/JAI.13595
Publisher: Elsevier BV
Date: 11-2021
Publisher: Hindawi Limited
Date: 10-04-2017
DOI: 10.1111/JAI.13374
Publisher: Oxford University Press (OUP)
Date: 29-04-2019
DOI: 10.1111/JAM.14257
Abstract: This study conducted bacterial community, virulence and antibiogram profiling inside the hindgut and skin of freshly caught hilsa fish and those sold at markets. The results of 16S rRNA-based high-throughput sequencing showed a higher number of bacterial genera in marketed fish s les than in fresh fish s les. The total operational taxonomic units, genus counts and ersity index were significantly higher (P > 0·05) in marketed fish, which also had abundant pathogenic bacterial groups. Skin s les had a lower profusion of pathogenic bacteria than gut s les. A total of 52 bacterial isolates from nine species were identified in this study, of which 25 were from a Chittagong market and 22 were from a Dhaka market, whereas only five were from fresh hilsa. The polymerase chain reaction lification of 12 species-specific virulence genes in the 52 isolates, namely, aer, hly, chxA, toxB, rtxC, sfa, uge, norB, trx, toxA, ipaH, sigA and coa, indicated a high number of positive s les containing Vibrio cholerae, Aeromonas spp., Klebsiella pneumoniae, Escherichia coli and Staphylococcus aureus. Antibiogram profiling of these bacteria against 10 commercial antibiotics showed high-resistance patterns of the isolates against sulfamethoxazole, kanamycin, neomycin, icillin and tetracycline. The results reveal the spread of multidrug-resistant bacteria in hilsa fish marketed for human consumption in Bangladesh. This study highlights the risk of spreading environmentally and clinically pathogenic bacteria in fish sold for human consumption in Bangladesh. Such bacteria come from aquatic pollution and poor handling, storage and transportation practices that may predispose fish to major outbreaks of infectious and waterborne diseases.
Publisher: OMICS Publishing Group
Date: 2016
Publisher: Elsevier BV
Date: 11-2021
Publisher: Penerbit Universiti Kebangsaan Malaysia (UKM Press)
Date: 09-2015
Publisher: Elsevier BV
Date: 07-2022
DOI: 10.1016/J.CHEMOSPHERE.2022.134276
Abstract: Zeolite is known to uptake toxic metals and filter nitrogenous waste from aquaculture effluents. The present study aimed to investigate the impacts of zeolite in three different applications namely, dietary zeolite (DZ), suspended zeolite (SZ) in the water column, and a combination of both (DZSZ) relative to unexposed freshwater crayfish, marron (control). At the end of the 56-days trial, the impact was assessed in terms of characterization of microbial communities in the culture environment and the intestine of marron. Alongside the microbial communities, the innate immune response of marron was also evaluated. The 16S rRNA data showed that marrons exposed to the suspended zeolite had a significant increase of bacterial ersity in the gut, including the restoration of marron core operational taxonomic units (OTUs), relative to other forms of exposures (DZ, DZSZ) and the control. Suspended zeolite alone also increased the number of unshared OTUs and genera, and improved predicted metabolic functions for the biosynthesis and digestion of proteins, amino acids, fatty acids, and hormones. In the tank sediment, the shift of microbial communities was connected more strongly with the time of experiment than the type of zeolite exposure. In the second case, only control marron had a different microbial ordination in terms of rare taxa present in the community. Nevertheless, the modulation in the gut environment was found more prominent in DZ, relative to modulation in the tank sediments. The taxa-environment correlation identified Rhodoferax as the most potential bacteria in removing nitrogenous waste from the rearing environment. Further analysis showed that SZ resulted in the upregulation of genes associated with the innate immune response of marron. Overall results suggest that SZ can be used to enrich microbial communities in the gut and tank sediments and better immune performance of marron.
Publisher: Elsevier BV
Date: 2021
Publisher: Springer Science and Business Media LLC
Date: 02-03-2021
DOI: 10.1038/S41598-021-84660-5
Abstract: The effects of feeding different levels of poultry by-product meal (PBM) replacing fishmeal (FM) protein, supplemented with tuna hydrolysate (TH) and Hermetia illucens (HI) larvae, on the growth, fillet quality, histological traits, immune status, oxidative biomarker levels and gut microbiota of juvenile barramundi, Lates calcarifer were investigated for six weeks. Barramundi were fed four isonitrogenous and isolipidic diets in which a FM based diet was used as the Control diet (Diet1) and compared with other non-FM diets containing 80%, 85% and 90% PBM along with the concurrent supplementation of 5% and/or 10% TH and HI larvae meal. These treatment diets were designated as 80PBM 10TH+10HI (Diet2), 85PBM 5TH+10HI (Diet3) and 90PBM 5TH+5HI (Diet4). The growth and condition factor of fish fed 80PBM 10TH+10HI and 85PBM 5TH+10HI were significantly higher than the Control. Total saturated, monounsaturated and polyunsaturated fatty acid retention in the fish muscle increased in fish fed PBM-based diets, supplemented with TH and HI larvae meal, with no adverse effect on post-harvest characteristics such as texture and colour of fish fillets. Improvement in serum total bilirubin and total protein content was found in all fish fed TH and HI larvae supplemented PBM. Similarly, immune response showed a significant increase in fish fed non-FM test diets than the Control. In the distal intestine, supplementation of any quantities of TH and HI larvae to PBM led to an increase in the microvilli density and neutral mucins while the number of goblet cells in the skin were unchanged. Liver, kidney, and spleen histology demonstrated a normal structure with no obvious changes in response to all test diets. Bacterial ersity increased in fish fed Diets 2 and 3 with a high abundance of Proteobacteria in Diets 1 and 4 and Firmicutes in Diets 2 and 3. The fish on test diets showed a lower abundance of genus Vibrio . Fish fed TH and HI larvae supplemented PBM diets showed lower infection rate to V. harveyi than the Control. Collectively, concurrent supplementation of TH and HI larvae could improve the quality of PBM diets with positive effects on growth, fillet quality, intestinal health, immunity, and disease resistance.
Publisher: Springer Science and Business Media LLC
Date: 12-2017
Publisher: CSIRO Publishing
Date: 2023
DOI: 10.1071/AN23064
Publisher: Hindawi Limited
Date: 20-04-2018
DOI: 10.1111/JAI.13707
Publisher: Hindawi Limited
Date: 11-10-2018
DOI: 10.1111/JAI.13806
Publisher: OMICS Publishing Group
Date: 2017
Publisher: Frontiers Media SA
Date: 31-01-2020
Publisher: Springer Science and Business Media LLC
Date: 13-10-2020
DOI: 10.1038/S41598-020-72726-9
Abstract: The search for suitable fish meal replacements in aqua-diets is a salient agenda in the constant effort of making aquaculture practices more sustainable. In this study, we tested four customised diets composed by systematic inclusion of pre-selected fish meal substitutes, lupin kernel meal, BSF meal, TH and PBM on growth, metabolism, cytokine profile, gut morphology and microbiota of juvenile Lates calcarifer . Five isoproteic and isoenergetic diets were prepared viz. FM100 as a control (without fish meal substitute), while FM75, FM50, FM25 and FM0 indicates replacement of fish meal (FM) at 25%, 50%, 75%, and 100%, respectively by a mixture of four different pre-selected non-fish meal (NFM) ingredients. Fish fed FM100, FM75, FM50, FM25 exhibited consistent growth and haematological response, while the fish fed no fishmeal (FM0) showed significant decline in final body weight (FBW) and specific growth rate (SGR). The poor growth performance was correlated with a decrease in villous width, microvilli height and goblet cells density. A significant shift in abundance profile of Psychrobacter in the gut microbial profile of fish fed FM50 was noticed compared to fish fed FM100. The results of qRT-PCR showed up-regulated expression of innate immune responsive genes in the FM50 group. The adverse impacts on growth performance and gut health of fish fed FM0 suggest that the complete substitution of fishmeal is not advisable and the inclusion range of these alternatives should be decided for a species only after examining their effect on maximal physiological performance.
Publisher: Wiley
Date: 07-02-2022
Abstract: To reduce the reliance on fishmeal (FM), other protein sources have been evaluated on cultured animals. In a 60‐days feeding trial, marrons ( Cherax cainii ) were fed a FM diet and five test diets containing 100% of plant‐based protein sources such as soybean, lupin and valorised animal‐based proteins such as poultry‐by‐product, black soldier fly and tuna hydrolysate. At the end of the trial, DNA s les from marron gut and rearing water were investigated through DNA‐based 16S rRNA gene sequencing. Plant‐based diets increased abundance for Aeromonas , Flavobacterium and Vogesella , whereas animal and insect proteins influenced erse bacterial groups in the gut linked to various metabolic activities. Insect meal in the water favoured the growth of Firmicutes and lactic acid bacteria, beneficial for the marron health. Aeromonas richness in the gut and reared water signified the ubiquitous nature of the genus in the environment. The higher bacterial ersity in the gut and water with PBP and BSF was further supported by qPCR quantification of the bacterial single‐copy gene, rpoB. The overall results suggested that PBP and BSF can exhibit positive and influential effects on the gut and water microbial communities, hence can be used as sustainable ingredients for the crayfish aquaculture.
Publisher: Springer Science and Business Media LLC
Date: 13-11-2019
DOI: 10.1038/S41598-019-53018-3
Abstract: This study investigated the effects of replacement of fishmeal (FM) with poultry by-product (PBM) protein, supplemented with black soldier fly, Hermetia illucens (HI) larvae on growth, histomormhology, immunity and resistance to Vibrio harveyi in juvenile barramundi. Two hundred and twenty five barramundi averaging 3.51 ± 0.03 g were randomly allocated into three groups and fed isonitrogenous and isocalorific diets containing different levels of PBM supplemented with HI as follows: Control (FM based diet), 45PBM + HI (45% PBM supplemented with 10% HI), and 90PBM + HI (90% PBM supplemented with 10% HI) for 6 weeks. Results showed that dietary inclusion of 45PBM + HI significantly improved the growth performance than control whereas growth inhibition occurred in the 90PBM + HI. The 45PBM + HI groups demonstrated significant increases in histometric measurements (villus and enterocyte width, and microvilli height) and acidic mucins. The impaired growth in 90PBM + HI groups was further associated with multifocal necrosis in the liver, an upregulation of the stress related genes (HSP70 and HSP90) and increase in the levels of liver enzymes. When 45PBM + HI was fed, survival against V. harveyi increased significantly and also an increase in serum immunity and immune-related genes in the head kidney was observed after infection.
Publisher: Hindawi Limited
Date: 10-05-2019
DOI: 10.1111/ARE.14088
Location: No location found
Location: Australia
No related grants have been discovered for Dr Md Reaz Chaklader.