ORCID Profile
0000-0002-4497-1795
Current Organisation
James Cook University
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Aquaculture | Fish Pests and Diseases | Fisheries Sciences | Fish Physiology and Genetics
Aquaculture Prawns | Aquaculture Fin Fish (excl. Tuna) | Fisheries - Aquaculture not elsewhere classified |
Publisher: American Society for Microbiology
Date: 18-04-2019
DOI: 10.1128/MRA.00081-19
Abstract: The complete RNA-1 and RNA-2 genome sequences of Betanodavirus were obtained from Australian barramundi ( Lates calcarifer ). Phylogenetic analyses revealed that the sequences have closest homology to the red spotted grouper nervous necrosis virus (RGNNV) species and share between 91 and 98% homology with the other two published complete/near-complete sequences of isolates from Australian fish.
Publisher: MDPI AG
Date: 12-08-2022
DOI: 10.3390/APP12168090
Abstract: Farmed shrimp feeds are under continuous development to maximise shrimp growth, health, and feed efficiency. There is evidence in aquaculture species that botanical ingredients may be capable of improvements in each of these traits. However, the full potential of these ingredients remains largely unexplored. We investigated the effect of dietary additions of a polyphenol-rich sugarcane extract (PRSE) at the rate of 0, 2, 4, or 6 g kg−1 of diet, on the growth, survival, feed conversion ratio, and pathogen loading of black tiger shrimp (Penaeus monodon) over a 10-week feeding period in a small-scale intensive RAS system. Shrimp fed the highest level of PRSE compared to the control were 54% heavier (15.4 vs. 10.0 g p 0.05), had 39% lower feed conversion ratios (1.9 vs. 3.1 p 0.05), had a higher survival rate (50 vs. 26%), and an increased carapace length (27.5 vs. 23.3 mm p 0.05). These findings demonstrate that polyphenol-rich sugarcane extracts have the potential to improve shrimp growth and FCR when added into feed formulations. Further research should be conducted in commercial rearing conditions for validation.
Publisher: Inter-Research Science Center
Date: 2002
DOI: 10.3354/DAO050079
Abstract: In the summer of 1999/2000, an epizootic occurred in cultured juvenile redclaw crayfish Cherax quadricarinatus on one commercial crayfish farm in northern Queensland, Australia. Mortalities occurred over 4 wk, with up to 96% cumulative mortalities in 2 earthen ponds stocked with juveniles. The crayfish were weak, anorexic and lethargic. A transmission trial was conducted, using filtered, cell-free extract prepared from infected crayfish as inoculum. The disease was reproduced, with on-going mortalities occurring in inoculated crayfish over 55 d. Experimentally inoculated crayfish showed gross signs of malaise, anorexia and disorientation before dying. Two types of intranuclear inclusion bodies (INIBs) were seen in tissues of endodermal, ectodermal and mesodermal origin by light microscopy with haematoxylin and eosin (H&E) stained sections. 'Early'-stage INIBs were eosinophilic, rounded and located centrally within slightly enlarged nuclei while 'late'-stage INIBs were well-rounded and deeply basophilic. The gills, cuticular epithelium and epithelial cells of the foregut, midgut and hindgut were the most heavily infected tissues. By transmission electron microscopy, virions with an average diameter of 19.5 nm were seen within electron-dense granular inclusion bodies within enlarged nuclei of both naturally and experimentally infected crayfish. The size of the virions and cytopathology are consistent with characteristics of viruses in the Family Parvoviridae. This is the first reported case of mass mortality caused by a parvo-like virus infection in C. quadricarinatus.
Publisher: Elsevier BV
Date: 09-2019
Publisher: SAGE Publications
Date: 29-02-2012
Abstract: A 5-year-old Australian stock horse in Monto, Queensland, Australia, developed neurological signs and was euthanized after a 6-day course of illness. Histological examination of the brain and spinal cord revealed moderate to severe subacute, nonsuppurative encephalomyelitis. Sections of spinal cord stained positively in immunohistochemistry with a flavivirus-specific monoclonal antibody. Reverse transcription polymerase chain reaction assay targeting the envelope gene of flavivirus yielded positive results from brain, spinal cord, cerebrospinal fluid, and facial nerve. A flavivirus was isolated from the cerebrum and spinal cord. Nucleotide sequences obtained from licons from both tissues and virus isolated in cell culture were compared with those in GenBank and had 96–98% identity with Murray Valley encephalitis virus. The partial envelope gene sequence of the viral isolate clustered into genotype 1 and was most closely related to a previous Queensland isolate.
Publisher: Wiley
Date: 13-08-2015
DOI: 10.1111/JFD.12273
Abstract: Since 2007, 96 wild Queensland groupers, Epinephelus lanceolatus, (Bloch), have been found dead in NE Australia. In some cases, Streptococcus agalactiae (Group B Streptococcus, GBS) was isolated. At present, a GBS isolate from a wild grouper case was employed in experimental challenge trials in hatchery-reared Queensland grouper by different routes of exposure. Injection resulted in rapid development of clinical signs including bilateral exophthalmia, hyperaemic skin or fins and abnormal swimming. Death occurred in, and GBS was re-isolated from, 98% fish injected and was detected by PCR in brain, head kidney and spleen from all fish, regardless of challenge dose. Challenge by immersion resulted in lower morbidity with a clear dose response. Whilst infection was established via oral challenge by admixture with feed, no mortality occurred. Histology showed pathology consistent with GBS infection in organs examined from all injected fish, from fish challenged with medium and high doses by immersion, and from high-dose oral challenge. These experimental challenges demonstrated that GBS isolated from wild Queensland grouper reproduced disease in experimentally challenged fish and resulted in pathology that was consistent with that seen in wild Queensland grouper infected with S. agalactiae.
Publisher: Elsevier BV
Date: 12-2015
DOI: 10.1016/J.MARGEN.2015.07.009
Abstract: In 1999, the causative agent of an epizootic in Cherax quadricarinatus was described, and given the provisional name Cherax quadricarinatus parvovirus-like. Sequencing of the 6334 nt genome identified three open-reading frames on the top strand coding NS3 (35.55 kDa), NS1 (67.36 kDa) and NS2 (35.18 kDa) and on the bottom strand a single open reading frame which most likely encodes 4 structural proteins. Motifs characteristic of the Densovirinae were found in the ORFs. Phylogenetic analysis of the amino acids in NS1 places the genome in the genus Ambidensovirus, most closely related to the marine sea star densovirus (75%, E=0.0) and distantly related to Acheta domestica densovirus (44.1%). The virus name is proposed as species Decapod ambidensovirus, variant Cherax quadricarinatus densovirus. This is the first Ambidensovirus to be found in decapod crustaceans and the first of the subfamily Densovirinae to be sequenced from a freshwater crayfish. Cherax quadricarinatus densovirus and sea star densovirus are the first highly related Densovirinae to infect phylogenetically disparate hosts and are thus far, unique among the Densovirinae.
Publisher: Wiley
Date: 10-02-2012
DOI: 10.1111/J.1365-2761.2011.01332.X
Abstract: Ninety-three giant Queensland grouper, Epinephelus lanceolatus (Bloch), were found dead in Queensland, Australia, from 2007 to 2011. Most dead fish occurred in northern Queensland, with a peak of mortalities in Cairns in June 2008. In 2009, sick wild fish including giant sea catfish, Arius thalassinus (Rüppell), and javelin grunter, Pomadasys kaakan (Cuvier), also occurred in Cairns. In 2009 and 2010, two disease epizootics involving wild stingrays occurred at Sea World marine aquarium. Necropsy, histopathology, bacteriology and PCR determined that the cause of deaths of 12 giant Queensland grouper, three wild fish, six estuary rays, Dasyatis fluviorum (Ogilby), one mangrove whipray, Himantura granulata (Macleay), and one eastern shovelnose ray, Aptychotrema rostrata (Shaw), was Streptococcus agalactiae septicaemia. Biochemical testing of 34 S. agalactiae isolates from giant Queensland grouper, wild fish and stingrays showed all had identical biochemical profiles. The 16S rRNA gene sequences of isolates confirmed all isolates were S. agalactiae genotyping of selected S. agalactiae isolates showed the isolates from giant Queensland grouper were serotype Ib, whereas isolates from wild fish and stingrays closely resembled serotype II. This is the first report of S. agalactiae from wild giant Queensland grouper and other wild tropical fish and stingray species in Queensland, Australia.
Publisher: Oxford University Press (OUP)
Date: 08-2007
Publisher: Elsevier BV
Date: 2015
Publisher: Springer Science and Business Media LLC
Date: 10-09-2018
DOI: 10.1038/S41598-018-31148-4
Abstract: The black tiger shrimp ( Penaeus monodon ) remains the second most widely cultured shrimp species globally however, issues with disease and domestication have seen production levels stagnate over the past two decades. To help identify innovative solutions needed to resolve bottlenecks h ering the culture of this species, it is important to generate genetic and genomic resources. Towards this aim, we have produced the most complete publicly available P . monodon transcriptome database to date based on nine adult tissues and eight early life-history stages (BUSCO - Complete: 98.2% [Duplicated: 51.3%], Fragmented: 0.8%, Missing: 1.0%). The assembly resulted in 236,388 contigs, which were then further segregated into 99,203 adult tissue specific and 58,678 early life-history stage specific clusters. While annotation rates were low (approximately 30%), as is typical for a non-model organisms, annotated transcript clusters were successfully mapped to several hundred functional KEGG pathways. Transcripts were clustered into groups within tissues and early life-history stages, providing initial evidence for their roles in specific tissue functions, or developmental transitions. We expect the transcriptome to provide an essential resource to investigate the molecular basis of commercially relevant-significant traits in P . monodon and other shrimp species.
Publisher: Wiley
Date: 24-08-2018
DOI: 10.1111/JFD.12701
Abstract: The aim of this study was to describe two epizootics of high mortalities from infection with Streptococcus agalactiae, occurring in captive rays held in a marine display aquarium in south-east Queensland, Australia, in 2009 and 2010. Five different species of rays were affected, including mangrove whiprays (Himantura granulata), estuary rays (Dasyatis fluviorum), eastern shovelnose rays (Aptychotrema rostrata), white-spotted eagle rays (Aetobatus narinari) and blue-spotted mask rays (Neotrygon kuhlii). This report describes the history of both epizootics including collection, quarantine and husbandry of rays, the disease epizootics, clinico-pathological features of the disease, antimicrobial therapy, autogenous vaccine production, and laboratory studies including clinical and histopathology, bacteriology, PCR, molecular serotyping and sequencing of the bacterium S. agalactiae.
Start Date: 2021
End Date: 2024
Funder: Cooperative Research Centre for Developing Northern Australia
View Funded ActivityStart Date: 2018
End Date: 2020
Funder: Cooperative Research Centre for Developing Northern Australia
View Funded ActivityStart Date: 2018
End Date: 2021
Funder: Fisheries Research and Development Corporation
View Funded ActivityStart Date: 09-2021
End Date: 08-2026
Amount: $4,996,503.00
Funder: Australian Research Council
View Funded Activity