ORCID Profile
0000-0001-5957-1383
Current Organisation
Princess Nourah Bint Abdulrahman University
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Publisher: MDPI AG
Date: 14-03-2023
DOI: 10.3390/DIAGNOSTICS13061104
Abstract: Melanoma, a kind of skin cancer that is very risky, is distinguished by uncontrolled cell multiplication. Melanoma detection is of the utmost significance in clinical practice because of the atypical border structure and the numerous types of tissue it can involve. The identification of melanoma is still a challenging process for color images, despite the fact that numerous approaches have been proposed in the research that has been done. In this research, we present a comprehensive system for the efficient and precise classification of skin lesions. The framework includes preprocessing, segmentation, feature extraction, and classification modules. Preprocessing with DullRazor eliminates skin-imaging hair artifacts. Next, Fully Connected Neural Network (FCNN) semantic segmentation extracts precise and obvious Regions of Interest (ROIs). We then extract relevant skin image features from ROIs using an enhanced Sobel Directional Pattern (SDP). For skin image analysis, Sobel Directional Pattern outperforms ABCD. Finally, a stacked Restricted Boltzmann Machine (RBM) classifies skin ROIs. Stacked RBMs accurately classify skin melanoma. The experiments have been conducted on five datasets: Pedro Hispano Hospital (PH2), International Skin Imaging Collaboration (ISIC 2016), ISIC 2017, Dermnet, and DermIS, and achieved an accuracy of 99.8%, 96.5%, 95.5%, 87.9%, and 97.6%, respectively. The results show that a stack of Restricted Boltzmann Machines is superior for categorizing skin cancer types using the proposed innovative SDP.
Publisher: Springer Science and Business Media LLC
Date: 28-02-2022
DOI: 10.1038/S41587-021-01186-X
Abstract: As the biomedical community produces datasets that are increasingly complex and high dimensional, there is a need for more sophisticated computational tools to extract biological insights. We present Multiscale PHATE, a method that sweeps through all levels of data granularity to learn abstracted biological features directly predictive of disease outcome. Built on a coarse-graining process called diffusion condensation, Multiscale PHATE learns a data topology that can be analyzed at coarse resolutions for high-level summarizations of data and at fine resolutions for detailed representations of subsets. We apply Multiscale PHATE to a coronavirus disease 2019 (COVID-19) dataset with 54 million cells from 168 hospitalized patients and find that patients who die show CD16
Publisher: MDPI AG
Date: 16-11-2022
DOI: 10.3390/DIAGNOSTICS12112815
Abstract: Blood cells carry important information that can be used to represent a person’s current state of health. The identification of different types of blood cells in a timely and precise manner is essential to cutting the infection risks that people face on a daily basis. The BCNet is an artificial intelligence (AI)-based deep learning (DL) framework that was proposed based on the capability of transfer learning with a convolutional neural network to rapidly and automatically identify the blood cells in an eight-class identification scenario: Basophil, Eosinophil, Erythroblast, Immature Granulocytes, Lymphocyte, Monocyte, Neutrophil, and Platelet. For the purpose of establishing the dependability and viability of BCNet, exhaustive experiments consisting of five-fold cross-validation tests are carried out. Using the transfer learning strategy, we conducted in-depth comprehensive experiments on the proposed BCNet’s architecture and test it with three optimizers of ADAM, RMSprop (RMSP), and stochastic gradient descent (SGD). Meanwhile, the performance of the proposed BCNet is directly compared using the same dataset with the state-of-the-art deep learning models of DensNet, ResNet, Inception, and MobileNet. When employing the different optimizers, the BCNet framework demonstrated better classification performance with ADAM and RMSP optimizers. The best evaluation performance was achieved using the RMSP optimizer in terms of 98.51% accuracy and 96.24% F1-score. Compared with the baseline model, the BCNet clearly improved the prediction accuracy performance 1.94%, 3.33%, and 1.65% using the optimizers of ADAM, RMSP, and SGD, respectively. The proposed BCNet model outperformed the AI models of DenseNet, ResNet, Inception, and MobileNet in terms of the testing time of a single blood cell image by 10.98, 4.26, 2.03, and 0.21 msec. In comparison to the most recent deep learning models, the BCNet model could be able to generate encouraging outcomes. It is essential for the advancement of healthcare facilities to have such a recognition rate improving the detection performance of the blood cells.
Publisher: MDPI AG
Date: 15-04-2023
DOI: 10.3390/DIAGNOSTICS13081422
Abstract: Image segmentation has been one of the most active research areas in the last decade. The traditional multi-level thresholding techniques are effective for bi-level thresholding because of their resilience, simplicity, accuracy, and low convergence time, but these traditional techniques are not effective in determining the optimal multi-level thresholding for image segmentation. Therefore, an efficient version of the search and rescue optimization algorithm (SAR) based on opposition-based learning (OBL) is proposed in this paper to segment blood-cell images and solve problems of multi-level thresholding. The SAR algorithm is one of the most popular meta-heuristic algorithms (MHs) that mimics humans’ exploration behavior during search and rescue operations. The SAR algorithm, which utilizes the OBL technique to enhance the algorithm’s ability to jump out of the local optimum and enhance its search efficiency, is termed mSAR. A set of experiments is applied to evaluate the performance of mSAR, solve the problem of multi-level thresholding for image segmentation, and demonstrate the impact of combining the OBL technique with the original SAR for improving solution quality and accelerating convergence speed. The effectiveness of the proposed mSAR is evaluated against other competing algorithms, including the L’evy flight distribution (LFD), Harris hawks optimization (HHO), sine cosine algorithm (SCA), equilibrium optimizer (EO), gravitational search algorithm (GSA), arithmetic optimization algorithm (AOA), and the original SAR. Furthermore, a set of experiments for multi-level thresholding image segmentation is performed to prove the superiority of the proposed mSAR using fuzzy entropy and the Otsu method as two objective functions over a set of benchmark images with different numbers of thresholds based on a set of evaluation matrices. Finally, analysis of the experiments’ outcomes indicates that the mSAR algorithm is highly efficient in terms of the quality of the segmented image and feature conservation, compared with the other competing algorithms.
No related grants have been discovered for Nagwan Abdel Samee.