David Carabias-Galindo

Neurodesk: An accessible, flexible, and portable data analysis environment for reproducible neuroimaging

Publisher: Cold Spring Harbor Laboratory

Date: 23-12-2022

DOI: 10.1101/2022.12.23.521691

Abstract: Neuroimaging data analysis often requires purpose-built software, which can be challenging to install and may produce different results across computing environments. Beyond being a roadblock to neuroscientists, these issues of accessibility and portability can h er the reproducibility of neuroimaging data analysis pipelines. Here, we introduce the Neurodesk platform, which harnesses software containers to support a comprehensive and growing suite of neuroimaging software (www.neurodesk.org/). Neurodesk includes a browser-accessible virtual desktop environment and a command line interface, mediating access to containerized neuroimaging software libraries on various computing platforms, including personal and high-performance computers, cloud computing and Jupyter Notebooks. This community-oriented, open-source platform enables a paradigm shift for neuroimaging data analysis, allowing for accessible, flexible, fully reproducible, and portable data analysis pipelines.

The Routledge Companion to Music, Technology, and Education

Publisher: Routledge

Date: 20-01-2012

DOI: 10.4324/9781315686431

National Institutes Of Health

Location: United States of America

View Organisation

Universidad De Valladolid Facultad De Educación De Segovia

Location: Spain

View Organisation

Universiteit Maastricht

Location: Netherlands

View Organisation

Max-Planck-Gesellschaft

Location: Germany

View Organisation

Max-Planck-Gesellschaft

Location: No location found

View Organisation