ORCID Profile
0000-0003-1109-7015
Current Organisation
Alliance for Conservation Tree Genomics
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Publications
Molecular phylogenetics ofPhyllanthussensu lato (Phyllanthaceae): Towards coherent monophyletic taxa
Publisher: Wiley
Date: 31-12-2020
DOI: 10.1002/TAX.12424
The soursop genome and comparative genomics of basal angiosperms provide new insights on evolutionary incongruence
Publisher: Cold Spring Harbor Laboratory
Date: 17-05-2019
DOI: 10.1101/639153
Abstract: Deep relationships and the sequence of ergence among major lineages of angiosperms (magnoliids, monocots and eudicots) remain ambiguous and differ depending on analytical approaches and datasets used. Complete genomes potentially provide opportunities to resolve these uncertainties, but two recently published magnoliid genomes instead deliver further conflicting signals. To disentangle key angiosperm relationships, we report a high-quality draft genome for the soursop ( Annona muricata , Annonaceae). We reconstructed phylogenomic trees and show that the soursop represents a genomic mosaic supporting different histories, with scaffolds almost exclusively supporting single topologies. However, coalescent methods and a majority of genes support magnoliids as sister to monocots and eudicots, where previous whole genome-based studies remained inconclusive. This result is clear and consistent with recent studies using plastomes. The soursop genome highlights the need for more early erging angiosperm genomes and critical assessment of the suitability of such genomes for inferring evolutionary history.
A revised phylogenetic classification of tribe Phyllantheae (Phyllanthaceae)
Publisher: Magnolia Press
Date: 18-03-2022
DOI: 10.11646/PHYTOTAXA.540.1.1
Abstract: The majority of tribe Phyllantheae (Phyllanthaceae) is currently placed in the paraphyletic genus Phyllanthus and discussions have persisted on how to resolve this issue. Here, we split Phyllanthus into ten monophyletic genera, which are all reinstatements of former genera, but with changes made to the circumscription and constituent species of each group. The genera Breynia, Glochidion and Synostemon were recently found to be nested within Phyllanthus and discussions ensued whether or not to subsume everything into Phyllanthus s.l. Instead of combining all these genera, we here implement the solution of splitting Phyllanthus into strictly monophyletic genera to ensure that the classification is consistent with the latest phylogenetic results. The new classification is based on a phylogenetic framework combined with differences in habit, branching type, floral, fruit and pollen morphology. With this new ision of the genus Phyllanthus, tribe Phyllantheae will consist of the following 18 genera: Breynia, Cathetus, Cicca, Dendrophyllanthus, Emblica, Flueggea, Glochidion, Heterosavia, Kirganelia, Lingelsheimia, Lysiandra, Margaritaria, Moeroris, Nellica, Nymphanthus, Phyllanthus, Plagiocladus and Synostemon. As a result of the reinstated genera, five new names for illegitimate combinations or previous overlooked nomenclatural anomalies and 645 new combinations are proposed. Several keys are provided to distinguish the reinstated genera. Full species lists are given for the reinstated genera treated here except for Breynia, Synostemon and Glochidion.
Erratum: Bouman, R.W., Keβler, P.J.A., Telford, I.R.H., Bruhl, J.J., Strijk, J.S., Saunders, R.M.K., Esser, H.-J., Falcón-Hidalgo, B. & van Welzen, P.C. (2022) A revised phylogenetic classific
Publisher: Magnolia Press
Date: 16-05-2023
DOI: 10.11646/PHYTOTAXA.597.3.5
Abstract: N/A
Related Organisations
Alliance For Conservation Tree Genomics
Location: Lao People's Democratic Republic
Related Funding Activities
No related grants have been discovered for Joeri Sergej Strijk.