ORCID Profile
0000-0001-5227-7405
Current Organisation
NSW Department of Primary Industries
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Publisher: Wiley
Date: 22-03-2011
DOI: 10.1002/JCTB.2594
Publisher: CSIRO Publishing
Date: 2006
DOI: 10.1071/SR05137
Abstract: The grain-producing regions of northern New South Wales and southern and central Queensland are characterised by cropping systems that are strongly dependent on stored soil moisture rather than in-crop rainfall, and tillage systems that are increasingly reliant on zero or minimum tillage. Crops are grown relatively infrequently and crop rotations are dominated by winter and summer grains (wheat [Triticum aestivum L.] and sorghum [Sorghum bicolor L. Moench], respectively), with smaller areas of grain legumes and cotton (Gossypium hirsutum L.). The grey, black, and brown Vertosols represent the more productive soils in the region under rainfed cropping, and are the focus of work reported in this study. Soil s les were collected from surface soils (0–0.30 m) across the region, utilising sites of long term tillage and residue management studies, fertiliser trials, and commercial fields to enable an assessment of the impact of various management practices on soil biological properties. A number of biological and biochemical parameters were measured (microbial biomass C, total organic C and labile C fractions, total C and N, microbial activity using FDA, cellulase activity, free living nematodes, total DNA and fatty acid profiles), and the response of wheat, sorghum, and chickpea (Cicer arietinum L.) to steam pasteurisation was assessed in glasshouse bioassays. The objective was to obtain an indication of the biological status of grain-growing soils and assess the impact of biological constraints in soils from different regions and management systems. Results showed that biological activity in cropped soils was consistently low relative to other land uses in northern Australia, with management practices like stubble retention and adoption of zero tillage producing relatively small benefits. In the case of zero tillage, many of these benefits were confined to the top 0.05 m of the soil profile. Fallowing to recharge soil moisture reserves significantly reduced all soil biological parameters, while pasture leys produced consistent positive benefits. Breaking a long fallow with a short duration grain or brown manure crop significantly moderated the negative effects of a long bare fallow on soil biology. Use of inorganic N and P fertilisers produced minimal effects on soil biota, with the exception of one component of the free-living nematode community (the Dorylaimida). The glasshouse bioassays provided consistent evidence that soil biota were constraining growth of both grain crops (sorghum and wheat) but not the grain legume (chickpea). The biota associated with this constraint have not yet been identified, but effects were consistent across the region and were not associated with the presence of any known pathogen or correlated with any of the measured soil biological or biochemical properties. Further work to confirm the existence and significance of these constraints under field conditions is needed. None of the measured biological or biochemical parameters consistently changed in response to management practices, while conflicting conclusions could sometimes be drawn from different measurements on the same soil s le. This highlights the need for further work on diagnostic tools to quantify soil biological communities, and suggests there is no clear link between measured changes in soil biological communities and economically or ecologically important soil attributes.
Publisher: Elsevier BV
Date: 09-2012
Publisher: Elsevier BV
Date: 12-2014
DOI: 10.1016/J.BIORTECH.2014.09.063
Abstract: Cotton ginning trash (CGT) collected from Australian cotton gins was evaluated for bioethanol production. CGT composition varied between ginning operations and contained high levels of extractives (26-28%), acid-insoluble material (17-22%) and holocellulose (42-50%). Pretreatment conditions of time (4-20 min), temperature (160-220 °C) and sulfuric acid concentration (0-2%) were optimised using a central composite design. Response surface modelling revealed that CGT fibre pretreated at 180 °C in 0.8% H2SO4 for 12 min was optimal for maximising enzymatic glucose recoveries and achieved yields of 89% theoretical, whilst the total accumulated levels of furans and acetic acid remained relatively low at <1 and 2 g/L respectively. Response surface modelling also estimated maximum xylose recovery in pretreated liquors (87% theoretical) under the set conditions of 150 °C in 1.9% H2SO4 for 23.8 min. Yeast fermentations yielded high ethanol titres of 85%, 88% and 70% theoretical from glucose generated from: (a) enzymatic hydrolysis of washed pretreated fibres, (b) enzymatic hydrolysis of whole pretreated slurries and (c) simultaneous saccharification fermentations, respectively.
Publisher: MDPI AG
Date: 14-01-2022
DOI: 10.3390/MOLECULES27020526
Abstract: Natural α-bisabolol has been widely used in cosmetics and is sourced mainly from the stems of Candeia trees that have become endangered due to over exploitation. The in vitro anti-inflammatory activity of cotton gin trash (CGT) essential oil and the major terpenoid (β-bisabolol) purified from the oil were investigated against lipopolysaccharide (LPS)-stimulated RAW264.7 macrophages as well as the 3t3 and HS27 fibroblast cell lines. Nitric oxide (NO), prostaglandin E2 (PGE2), tumor necrosis factor-alpha (TNF-α), interleukin 6 (IL-6), and interleukin 8 (IL-8) were measured using Greiss reagent, enzyme-linked immunosorbent assay (ELISA), and cytokine bead array (CBA)-flow cytometry. Non-toxic concentrations of CGT oil and β-bisabolol (1.6–50.0 µg/mL) significantly inhibited the production of the inflammatory mediators in a dose-dependent manner. Maximal inhibition by β-bisabolol was 55.5% for NO, 62.3% for PGE2, and 45.3% for TNF-α production in RAW cells. β-Bisabolol induced a level of inhibition similar to an equal concentration of α-bisabolol (50.0 µg/mL), a known anti-inflammatory agent. These results suggest β-bisabolol exerts similar in vitro effects to known topical anti-inflammatory agents and could therefore be exploited for cosmetic and therapeutic uses. This is the first study to report the in vitro anti-inflammatory activity of β-bisabolol in CGT essential oil.
Publisher: Oxford University Press (OUP)
Date: 11-2004
DOI: 10.1016/J.FEMSLE.2004.09.010
Abstract: The organophosphate pesticide, Ethion, remains a major environmental contaminant in rural Australia and poses a significant threat to environmental and public health. The aerobic degradation of Ethion by mesophilic bacteria isolated from contaminated soils surrounding disused cattle dip sites was investigated. Two isolates, identified as Pseudomonas and Azospirillum species, were capable of biodegrading Ethion when cultivated in minimal salts medium. The abiotic hydrolytic degradation products of Ethion such as Ethion Dioxon and O,O-diethylthiosphosphate were not detected. The data suggest the rapid degradation of Ethion to support microbial growth. The results have implications for the development of a bioremediation strategy.
Publisher: MDPI AG
Date: 21-07-2021
DOI: 10.3390/JOF7080584
Abstract: Despite their notable root mutualism with blueberries (Vaccinium spp.), studies related to Ericoid mycorrhizal (ERM) are relatively limited. In this study, we report the isolation of 14 endomycorrhizal fungi and their identification by fungal colony morphology characterization combined with PCR- lified fungal internal transcribed spacer (ITS) sequence analyses. Six of the isolated strains were confirmed as beneficial mycorrhizal fungi for blueberry plants following inoculation. We observed the formation of typical ERM hyphae coil structures—which promote and nutritionally support growth—in blueberry seedlings and significant nitrogen and phosphorous content increases in erse tissues. QRT-PCRs confirmed changes in VcPHT1s expression patterns. After the formation of ERM, PHT1-1 transcription in roots was upregulated by 1.4- to threefold, whilst expression of PHT1-3 and PHT1-4 in roots were downregulated 72% and 60%, respectively. Amino acid sequence analysis of all four VcPHT1s genes from the blueberry variety “Sharpblue” revealed an overall structural similarity of 67% and predicted transmembrane domains. Cloning and overexpression of PHT1-1 and PHT1-3 genes in transgenic Arabidopsis thaliana plants significantly enriched total phosphorus and chlorophyll content, confirming that PHT1-1 and PHT1-3 gene functions are associated with the transport and absorption of phosphorus.
Publisher: Elsevier BV
Date: 09-2012
DOI: 10.1016/J.SCITOTENV.2012.06.079
Abstract: Columns of Bauxsol™ pellets were used in a field experiment as biomass support particle for wastewater microbial communities. The attached microbial community structure was analysed using denaturing gradient gel electrophoresis (DGGE), targeting the 16S rDNA gene's V3 region. DGGE profiles showed that the type and composition of support particles used (i.e. Bauxsol™ pellets or gravel) had a significant impact on the attached bacterial communities (64% dissimilarity). In addition, ecological indices revealed a more heterogeneous bacterial community structure on the Bauxsol™ pellets. TOC/TN ratios post-experiment (6.5-9.3) suggested a good level of biological activity (i.e. active biofilm) in the Bauxsol™ columns. Moreover, Bauxsol™ pellets were mostly made of inorganic carbon, suggesting insoluble carbonate biomineralisation. Polymerase chain reaction (PCR) lification of specific marker genes (i.e. bacterial and archaeal amoA genes, nosZ gene, and hzo gene) were used to identify the presence of attached bacterial communities associated with nitrogen transformation. The results along with geochemical data (i.e. up to 50% nitrogen removal) revealed co-existence of ammonia-oxidising bacteria, denitrifiers, and anammox organisms. This study conclusively demonstrates that microbial communities are well-adapted to Bauxsol™ pellets and bacterial communities involved in the nitrogen cycle are present.
Publisher: Elsevier BV
Date: 09-2010
DOI: 10.1016/J.BIORTECH.2010.03.116
Abstract: The impacts of varying pretreatment parameters (temperature, time, and alkalinity) on enzymatic hydrolysis of sorghum straw were investigated. Following pretreatment, both solids and lignin content was found to be inversely proportional to the severity of the treatments. Higher temperatures and alkali strength were quintessential for maximising sugar recoveries from enzyme saccharifications. Total sugar release peaked when sorghum straw was pretreated in 2% NaOH at 121 degrees C for 60 min representing a 5.6-fold higher yield compared to s les pretreated at 60 degrees C in the absence of alkali. Similarly, 4.3-fold increases in total sugars from s les treated with 2% NaOH at 60 degrees C for 90 min, confirmed the importance of alkali inclusion. Addition of beta-glucosidase and xylanase to saccharification mixtures enhanced reaction rates and final sugar yields, whilst reducing cellulase dosage 4-fold. Saccharification efficiency of pretreated solids approached 90% and 95% (w/w) with as little as 2.5 and 5.0 FPU cellulase/g, respectively.
Publisher: Elsevier BV
Date: 2008
Publisher: Springer Science and Business Media LLC
Date: 20-08-2016
Publisher: Elsevier BV
Date: 04-2020
Publisher: American Chemical Society (ACS)
Date: 29-03-2011
DOI: 10.1021/EF200241S
Publisher: Elsevier BV
Date: 06-2022
Publisher: Elsevier BV
Date: 06-2016
Publisher: Elsevier BV
Date: 09-2019
Publisher: Elsevier BV
Date: 12-2018
Publisher: Elsevier BV
Date: 02-2018
DOI: 10.1016/J.BIORTECH.2017.11.084
Abstract: Optimisation of conditions for gamma-valerolactone (GVL) pretreatment of Australian eucalyptus sawdust for high cellulose biomass and bioethanol production was demonstrated. Pretreatment parameters investigated included GVL concentrations of 35-50% w/w, temperatures of 120-180 °C and reaction durations of 0.5-2.0 h. Optimum conditions were determined using the response surface method (RSM) and central composite face-centred design. Cellulose content increased from 39.9% to a maximum of 89.3% w/w using treatments with 50% GVL at 156 °C for 0.5 h. Temperature had the most significant effect (RSM p < .05) on cellulose content of residual biomass and reducing operational duration of < 0.5 h may be viable according to RSM. PSSF fermentations of optimised pretreated eucalyptus sawdust produced up to 94% theoretical ethanol yield, which corresponded to approximately 181 kg of ethanol per dry ton of eucalyptus sawdust. The compositions of both the residual biomass and pretreatment liquors show that GVL pretreatment is a promising solvent for lignocellulosic biorefining.
Publisher: American Chemical Society (ACS)
Date: 03-06-2011
DOI: 10.1021/ES200934Y
Abstract: In this study, Bauxsol pellets packed in PVC columns were used to remove nutrients and trace-metals from municipal wastewater during a 6 months field trial. Bauxsol pellet columns showed a high phosphate removal rate via precipitation of PO(4)(3-) with Ca(2+) and Mg(2+) ions: at 90% in the 1st month at 80% from the second to fifth months and at 60% in the sixth month. Pellet bound total phosphorus and Colwell phosphorus were 7.3 g/kg and 2 g/kg and are about 20 times the concentrations found in most fertile soils. Trace-metals in effluents were bound, probably irreversibly under the columns' environmental conditions, to the Bauxsol minerals that have high surface area to volume ratios and high charge to mass ratios. Experimental results showed a complex nitrogen cycle operating within the Bauxsol pellet columns including anoxic nitrification, denitrification, and anammox processes. Although a transient pH spike, associated with the release of unreacted CaO from the cement binder used in the pellets, was observed, this may be readily corrected through post-treatment pH adjustment. Hence, the geochemistry of Bauxsol pellets can effectively remove and bind nutrients and trace-metals during wastewater treatment, and further research may show that saturated spent pellets can be used as fertilizer.
Publisher: Elsevier
Date: 2016
Publisher: Oxford University Press (OUP)
Date: 2007
DOI: 10.1111/J.1365-2672.2006.03047.X
Abstract: To develop a method to produce beads with encapsulated Rhodococcus erythropolis NI86/21 with high cell density, extended shelf life, ease of handling and good atrazine degradation capabilities in both liquid and in agricultural soil. Our findings show that the supplementary recovery step in nutrient broth media shortly after cell encapsulation facilitates cell survival in both wet and dry beads upon extended storage at 4 degrees C. Air drying has little or no impact on encapsulated R. erythropolis cell's ability to degrade atrazine in liquid or soil. Bead storage for periods extending up to 12 months at 4 degrees C did not affect the capacity of R. erythropolis encapsulated cells to degrade atrazine in either BMN or nonsterile soil extracts. Bentonite-amended beads formulated with 1% skim milk and exposed to the supplementary growth step, outperformed all other bead formats. These beads provided adequate numbers of vigorous R. erythropolis cells in either liquid or soil media to degrade atrazine. Supplementary growth in nutrient broth media immediately following cell encapsulation greatly enhances R. erythropolis cells survival in both wet and dry beads upon extended storage at 4 degrees C. Wet and dried beads have similar capacity for atrazine degradation, and their usefulness and appeal in agronomic practise will only be known after bioassay evaluation and successful demonstration at field scale using incurred residues. R. erythropolis NI86/21 encapsulated cells have the potential to reduce residual atrazine in soil, thereby minimizing the likelihood of off-site transport to ground or river water and reduce the loss of crops because of phytotoxicity of residual herbicide. Owing to their ease of handling, storage and possible compatibilities with pre-existing mechanical equipment, dried bead formats are ideally suited for agricultural and remediational applications.
Publisher: Elsevier BV
Date: 11-2022
Publisher: Elsevier BV
Date: 07-2011
Publisher: Microbiology Research Foundation
Date: 1994
DOI: 10.2323/JGAM.40.541
Publisher: Elsevier BV
Date: 05-2015
DOI: 10.1016/J.BIORTECH.2015.02.027
Abstract: This paper reports on processing options for the conversion of feedlot cattle manures into composite sugars for ethanol fermentation. Small-scale anaerobic digestion trials revealed that the process significantly reduces the content of glucan and xylan (ca. 70%) without effecting lignin. Moreover, anaerobic digestate (AD) fibres were poor substrates for cellulase (Cellic® CTec 2) saccharification, generating a maximum combined sugar yield of ca. 12% per original dry weight. Dilute acid pretreatment and enzyme saccharification of raw manures significantly improved total sugar recoveries, totalling 264 mg/g (79% theoretical). This was attained when manures were pretreated with 2.5% H2SO4 for 90 min at 121°C and saccharified with 50 FPU CTec 2/g glucan. Saccharomyces cerevisiae efficiently fermented crude hydrolysates within 6 h, yielding 7.3 g/L ethanol, representing glucose to ethanol conversion rate of 70%. With further developments (i.e., fermentation of xylose), this process could deliver greater yields, reinforcing its potential as a biofuel feedstock.
Publisher: Elsevier BV
Date: 04-2012
DOI: 10.1016/J.BIORTECH.2012.01.114
Abstract: Conditions for optimal pretreatment of eucalypt (Eucalyptus dunnii) and spotted gum (Corymbia citriodora) forestry thinning residues for bioethanol production were empirically determined using a 3(3) factorial design. Up to 161mg/g xylose (93% theoretical) was achieved at moderate combined severity factors (CSF) of 1.0-1.6. At CSF>2.0, xylose levels declined, owing to degradation. Moreover at high CSF, depolymerisation of cellulose was evident and corresponded to glucose (155mg/g, ∼33% cellulose) recovery in prehydrolysate. Likewise, efficient saccharification with Cellic® CTec 2 cellulase correlated well with increasing process severity. The best condition yielded 74% of the theoretical conversion and was attained at the height of severity (CSF of 2.48). Saccharomyces cerevisiae efficiently fermented crude E. dunnii hydrolysate within 30h, yielding 18g/L ethanol, representing a glucose to ethanol conversion rate of 0.475g/g (92%). Based on our findings, eucalyptus forest thinnings represent a potential feedstock option for the emerging Australian biofuel industry.
Publisher: Elsevier BV
Date: 02-2022
Publisher: Elsevier BV
Date: 02-1999
DOI: 10.1016/S0378-1119(98)00593-9
Abstract: Phage display technology permits the display of libraries of random combinations of light (LC) and heavy chain (HC) antibody genes. Maximizing the size of these libraries would enable the isolation of antibodies with high affinity and specificity. In this study, the loxP/Cre system of in-vivo recombination has been employed to construct an improved vector system for the display of antibodies. In this system, the chlor henicol acetyl transferase (CAT) gene is linked to a HC library in a donor plasmid, pUX. This CAT gene is 'silent' before recombination but active after recombination. A second acceptor phagemid, pMOX, is used for cloning the LC repertoire. Following infection with a Cre producing phage, pMOX accepts the CAT/HC library from pUX via site-specific recombination at the loxP sites. Recombinants can then be selected via chlor henicol resistance. Using this vector system, we have generated libraries of 4x109 recombinants. Restriction analysis and Fab expression confirmed that 100% of the colonies in the library were recombinants. This system provides a stable selectable mechanism for the generation of large libraries and avoids the isolation of non-recombinants encountered with earlier in-vivo recombination systems.
Publisher: Elsevier BV
Date: 11-2009
DOI: 10.1016/J.MIMET.2009.08.013
Abstract: A new method for extracting soil enzymes is described and a microplate method for assaying soil beta-1,4-glucanases (cellulases) and beta-1,3-glucanases (laminarinases). Soil s les were mechanically disrupted to produce crude enzyme extracts, and diluted preps incubated in microplates containing either carboxymethyl cellulose (CMC) to determine cellulase activity or laminarin substrate to determine laminarinase activity. The resulting glucose was measured using the fluorometric Amplex Red glucose assay. The method was reproducible, could be completed in 1 day and measured twice as much enzyme activity than the standard passive soil enzyme extraction procedure. The method described herein facilitates the development of high-throughput soil multiplex enzymatic assays from several soil s les at one time, and is well suited to the study of functional microbial ecology.
Publisher: Microbiology Research Foundation
Date: 1994
DOI: 10.2323/JGAM.40.421
Publisher: Springer Science and Business Media LLC
Date: 11-06-2019
Publisher: Wiley
Date: 29-04-2016
DOI: 10.1002/BBB.1651
Publisher: Oxford University Press (OUP)
Date: 11-2004
DOI: 10.1111/J.1365-2672.2004.02392.X
Abstract: To modify a strain of Salmonella serotype Typhimurium to express unique marker traits and then define how the concentration of the marker in bovine faeces affects the probability of its detection by culture preceded by immunomagnetic separation (IMS). DNA encoding for the production of green fluorescent protein (gfp) and resistance to kanamycin was inserted into the bacterial chromosome of Salm. Typhimurium. Transposon insertion was demonstrated by Southern blot hybridization. Varying amounts of one electroporant (gfpSal-1) were inoculated into suspensions of bovine faeces and attempts made to isolate gfpSal-1 using a protocol based on pre-enrichment incubation, IMS and enrichment in selective media. Isolates of gfpSal-1 were differentiated from wild strains of Salmonella using fluorescence under u.v. light and expression of kanamycin resistance. A logistic and Gompertz function each derived from the dose-response data partially explained the observations with the fit of the Gompertz function judged to be superior. The 10, 50 and 90% limits of detection from the Gompertz function were estimated to be 1.92, 2.03 and 2.27 CFU g(-1) respectively. Reliance on the traditional concept of 'limit of detection' could introduce unacceptable errors in the interpretation of test findings when the concentration of Salm. Typhimurium in bovine faeces (pooled or in idual) is below ca 3 CFU g(-1) of faeces. The dose-response curve can be used to aid the design of protocols for detecting Salmonella in in idual and pooled faecal specimens. The experiments demonstrate that both reporter genes in tandem are useful for studying the performance of culture-based methods for detecting pathogens in faeces.
Publisher: Springer Science and Business Media LLC
Date: 12-06-2017
Publisher: Public Library of Science (PLoS)
Date: 03-12-2015
Publisher: Springer Science and Business Media LLC
Date: 03-08-2019
Publisher: Oxford University Press (OUP)
Date: 10-2005
DOI: 10.1111/J.1365-2672.2005.02679.X
Abstract: To develop an encapsulation procedure for Rhodococcus erythropolis NI86/21 and demonstrate its use as a slow-release inoculant for reducing atrazine levels in aquatic and terrestrial environments. Alginate encapsulation procedures were developed for the atrazine-degrading bacteria R. erythropolis NI86/21. Several bead amendments, including bentonite, powdered activated carbon (PAC) and skimmed milk (SM), were evaluated for slow release of R. erythropolis NI86/21 and efficacy of atrazine degradation. All bead types demonstrated a capacity to degrade atrazine in basal minimal nutrient buffer whilst continually releasing viable bacterial cells. We found that the addition of bentonite hastened cell release whilst SM sustained cell viability in bead formulations. Reducing the percentage of SM to 1% (w/v) resulted in faster rates of atrazine degradation in both liquid and soil, and was found to prolong cell survival upon bead storage. Limited oxygen transfer affects the capacity of the encapsulated R. erythropolis cells to degrade atrazine. Degradation studies have demonstrated the efficacy of R. erythropolis encapsulated cells to degrade atrazine in amended liquid and soil. However, in their current formulation, the wet alginate-based beads are impractical for field application because of their poor cell viability during storage. R. erythropolis NI86/21-encapsulated cells have the potential to reduce atrazine residues in a number of soil and water environments, possibly ensuring the continued registration and use of atrazine in agriculture by minimizing or eliminating nontarget effects.
Publisher: American Chemical Society (ACS)
Date: 18-02-2010
DOI: 10.1021/ES9032138
Abstract: Bauxsol reagents (powder, slurry, or pellet forms) are powerful tools in environmental remediation and water and sewage treatment However, when used in circum-neutral water treatments, cement-bound Bauxsol pellets produce a sustained pH and alkalinity spike due to the presence of unreacted CaO in the cement binder. This study developed a pellet treatment system to minimize the alkalinity H spike. The recipe for pelletization consisted of Bauxsol powder, ordinary Portland cement (OPC), hydrophilic fumed silica, aluminum powder, a viscosity modifier, and water. Several batches (including different ratios and sizes) were run using modified makeup waters (H(2)0 + CO(2) or NaHCO(3)) or curing brines (CO(2), NaHCO(3), or Mg/CaCl(2)). Alkalinity, pH stability, and slake durability tests were performed on pellets before and/or after curing. The best result for reducing the alkalinity H spike was obtained from a MgCl(2), CaCl(2) bath treatment using a Bauxsol:cement ratio of 2.8:1 (pH 8.28 alkalinity 75.1 mg/L) for a 100 g batch or 245:1 (pH 8.05 alkalinity 35.4 mg/L) for a 1 kg batch. Although brine curing does provide a control on pH/alkalinity release, the pellets may still contain unreacted CaO. Therefore, a freshwater rinse of pellets before treating circum-neutral waters is recommended as is the continued investigation of alternative pellet binders.
Publisher: Elsevier BV
Date: 06-2014
DOI: 10.1016/J.SCITOTENV.2014.03.030
Abstract: Municipal wastewater was treated over a six month period in an unplanted constructed wetland with a lower soil layer and an upper Bauxsol™ pellet layer. The interactions between Bauxsol™ pellets, soil, effluent and microbial communities demonstrated a positive influence on contaminant removal. Bauxsol™ treated effluent showed >95% phosphate removal and ~26% nitrogen removal during the trial. Substantial quantities of nitrate, trace-metals and Colwell P were bound to the pellets, whereas only ammonium was bound to the soil. The structure of microbial communities analysed by denaturing gradient gel electrophoresis (DGGE) showed distinct bacterial communities attached to Bauxsol™ pellets and soil owing to differences in geochemistry and micro-environmental conditions. Polymerase chain reaction (PCR) lification of specific marker genes (i.e. bacterial and archaeal amoA genes, nosZ gene, and hzo gene) was used to evaluate the presence of microbial communities associated with nitrogen transformation. Data revealed the co-existence of aerobic ammonia-oxidising bacteria, anaerobic ammonia-oxidising bacteria (anammox) and denitrifiers attached to Bauxsol™ pellets and ammonia-oxidising bacteria and archaea attached to soil. This study successfully demonstrates that Bauxsol™ pellets are a suited alternative media for constructed wetland to treat wastewater effectively removing phosphate and serving as biomass support particles for bacterial communities associated with nitrogen-cycling.
Publisher: Oxford University Press (OUP)
Date: 07-2009
DOI: 10.1111/J.1574-6968.2009.01621.X
Abstract: Internal transcribed spacer (ITS) 86F and ITS4 and the ITS1-F and ITS86R primer pairs were tested to specifically lify fungal community DNA extracted from soil. Libraries were constructed from PCR- lified fragments, sequenced and compared against sequences deposited in GenBank. The results confirmed that the ITS86F and ITS4 primer pair was selectively specific for the Ascomycetes, Basidiomycetes and Zygomycetes fungal clades. Amplified products generated by the ITS1F and ITS86R primer pair also aligned with sequences from a range of species within the Ascomycete and Basidiomycete clades but not from the Zygomycete. Both primer sets demonstrated fungal specificity and appear to be well suited for rapid PCR-based (fingerprinting) analysis of environmental fungal community DNA. This is the first reported use and assessment of the ITS86F and ITS4 and the ITS1-F and ITS86R primer pairs in lifying fungal community DNA from soil.
Publisher: Mary Ann Liebert Inc
Date: 06-2017
Publisher: Springer Science and Business Media LLC
Date: 10-07-2023
DOI: 10.1007/S13399-023-04555-5
Abstract: The conversion of Eucalyptus biomass to ethanol via fermentation is beset with challenges including efficient sugar utilisation, the presence of inhibitors, expensive nutrients, and low yields. To address some of these challenges, this study evaluated Thermosacc Dry® and GSF335 xylose recombinant yeast in fermentations using acid pretreated Eucalyptus grandis fibre and hydrolysates. These fermentations were supplemented with novel and low-cost nutrients. Contrary to previous reports, the inclusion of trace metals in saccharification and hydrolysis fermentations of whole slurries did not eliminate the inhibitory effects of acetic acid. Elevated levels of xylitol and acetic acid suggested a redirection of carbon flux to redress redox imbalances in both yeast types. Using GSF335 propagated in xylose-enriched liquors, and Nutri-Plex Plus™, diammonium phosphate, or crude dried spent yeast as nitrogen sources, saccharification and hydrolysis fermentations produced ethanol yields ranging from 141.4 to 145.6 kg t −1 dry weight E.grandis . Inclusion of yeast hulls and trace metals in simultaneous saccharification and fermentations yielded 175.6 kg ethanol t −1 dry weight E.grandis , corresponding to a 64.4% conversion efficiency. Results from this study support the use of novel low-cost waste by-products as nutrient supplements in bioethanol production from Eucalyptus biomass. Furthermore, they have implications for the production of bioethanol from other lignocellulosic materials and warrant further investigation.
Publisher: Elsevier BV
Date: 07-2022
Publisher: Informa UK Limited
Date: 31-01-2011
No related grants have been discovered for Tony Vancov.