ORCID Profile
0000-0003-0011-6209
Current Organisations
Hokkaido University
,
University College Dublin
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Publisher: Elsevier BV
Date: 25-01-2019
Publisher: European Centre for Disease Control and Prevention (ECDC)
Date: 13-08-2020
DOI: 10.2807/1560-7917.ES.2020.25.32.2001410
Abstract: We show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.
Publisher: European Centre for Disease Control and Prevention (ECDC)
Date: 22-04-2021
Publisher: F1000 Research Ltd
Date: 19-05-2021
DOI: 10.12688/WELLCOMEOPENRES.16661.1
Abstract: Late in 2020, two genetically-distinct clusters of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) with mutations of biological concern were reported, one in the United Kingdom and one in South Africa. Using a combination of data from routine surveillance, genomic sequencing and international travel we track the international dispersal of lineages B.1.1.7 and B.1.351 (variant 501Y-V2). We account for potential biases in genomic surveillance efforts by including passenger volumes from location of where the lineage was first reported, London and South Africa respectively. Using the software tool grinch (global report investigating novel coronavirus haplotypes), we track the international spread of lineages of concern with automated daily reports, Further, we have built a custom tracking website (lobal_report.html) which hosts this daily report and will continue to include novel SARS-CoV-2 lineages of concern as they are detected.
Publisher: Centers for Disease Control and Prevention (CDC)
Date: 11-2019
Publisher: American Society for Microbiology
Date: 13-04-2023
DOI: 10.1128/SPECTRUM.04655-22
Abstract: This study revealed the huge capability of mosquitoes in harboring a rich ersity of RNA viruses, although relevant studies have characterized the intensively unparalleled ersity of RNA viruses previously. Furthermore, our findings showed discernible differences not only in viromic structure between mosquito genera and even between mosquito species within the same genus but also in the genetic ersity and abundance of Wolbachia between different mosquito populations.
Publisher: Frontiers Media SA
Date: 07-05-2019
Location: United Kingdom of Great Britain and Northern Ireland
No related grants have been discovered for Michael Carr.