ORCID Profile
0000-0002-2305-3960
Current Organisation
National University of Singapore
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Publisher: MDPI AG
Date: 10-05-2019
DOI: 10.3390/IJMS20092328
Abstract: In this work, we developed quantitative structure–activity relationships (QSAR) models for prediction of oxygen radical absorbance capacity (ORAC) of flavonoids. Both linear (partial least squares—PLS) and non-linear models (artificial neural networks—ANNs) were built using parameters of two well-established antioxidant activity mechanisms, namely, the hydrogen atom transfer (HAT) mechanism defined with the minimum bond dissociation enthalpy, and the sequential proton-loss electron transfer (SPLET) mechanism defined with proton affinity and electron transfer enthalpy. Due to pronounced solvent effects within the ORAC assay, the hydration energy was also considered. The four-parameter PLS-QSAR model yielded relatively high root mean square errors (RMSECV = 0.783, RMSEE = 0.668, RMSEP = 0.900). Conversely, the ANN-QSAR model yielded considerably lower errors (RMSEE = 0.180 ± 0.059, RMSEP1 = 0.164 ± 0.128, and RMSEP2 = 0.151 ± 0.114) due to the inherent non-linear relationships between molecular structures of flavonoids and ORAC values. Five-fold cross-validation was found to be unsuitable for the internal validation of the ANN-QSAR model with a high RMSECV of 0.999 ± 0.253 which is due to limited s le size where res ling with replacement is a considerably better alternative. Chemical domains of applicability were defined for both models confirming their reliability and robustness. Based on the PLS coefficients and partial derivatives, both models were interpreted in terms of the HAT and SPLET mechanisms. Theoretical computations based on density functional theory at ωb97XD/6-311++G(d,p) level of theory were also carried out to further shed light on the plausible mechanism of anti-peroxy radical activity. Calculated energetics for simplified models (genistein and quercetin) with peroxyl radical derived from 2,2′-azobis (2-amidino-propane) dihydrochloride suggested that both SPLET and single electron transfer followed by proton loss (SETPL) mechanisms are competitive and more favorable than HAT in aqueous medium. The finding is in good accord with the ANN-based QSAR modelling results. Finally, the strongly predictive ANN-QSAR model was used to predict antioxidant activities for a series of 115 flavonoids designed combinatorially with flavone as a template. Structural trends were analyzed, and general guidelines for synthesis of new flavonoid derivatives with potentially potent antioxidant activities were given.
Publisher: Springer Science and Business Media LLC
Date: 21-04-2015
Publisher: Royal Society of Chemistry (RSC)
Date: 2018
DOI: 10.1039/C8QO00183A
Abstract: We discovered a reaction between 1,8-pyrenedione and N , N ′-dialkylethylenediamine to form highly fluorescent products, via aza-Michael addition followed by double C–H activation facilitated by visible light.
Publisher: American Chemical Society (ACS)
Date: 11-07-2022
Abstract: Flavonoids, a class of polyphenolic substances widely present in the plant realm, are considered as ideal hypochlorite scavengers. However, to our knowledge, little study has focused on the structure-activity relationship between flavonoids and hypochlorite scavenging capacity. Herein, we report for the first time the three-dimensional quantitative structure and activity relationship (3D-QSAR) combined with comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA). Four models derived from CoMFA and CoMSIA with different combinations of descriptors were built and compared the CoMFA model, which included both steric and electrostatic fields, showed great potential (
Publisher: Elsevier BV
Date: 03-2018
Publisher: Springer Science and Business Media LLC
Date: 28-10-2022
DOI: 10.1038/S41467-022-34123-W
Abstract: Catalyzed oxidative C-C bond coupling reactions play an important role in the chemical synthesis of complex natural products of medicinal importance. However, the poor functional group tolerance renders them unfit for the synthesis of naturally occurring polyphenolic flavones. We find that molecular oxygen in alkaline water acts as a hydrogen atom acceptor and oxidant in catalyst-free (without added catalyst) oxidative coupling of luteolin and other flavones. By this facile method, we achieve the synthesis of a small collection of flavone dimers and trimers including naturally occurring dicranolomin, philonotisflavone, dehydrohegoflavone, distichumtriluteolin, and cyclodistichumtriluteolin. Mechanistic studies using both experimental and computational chemistry uncover the underlying reasons for optimal pH, oxygen availability, and counter-cations that define the success of the reaction. We expect our reaction opens up a green and sustainable way to synthesize flavonoid dimers and oligomers using the readily available monomeric flavonoids isolated from biomass and exploiting their use for health care products and treatment of diseases.
Publisher: American Chemical Society (ACS)
Date: 05-08-2015
DOI: 10.1021/ACS.JMEDCHEM.5B00848
Abstract: Hydrogen sulfide (H2S) is now recognized as a physiologically important gasotransmitter. Compounds which release H2S slowly are sought after for their potential in therapy. Herein the synthesis of a series of phosphordithioates based on 1 (GYY4137) are described. Their H2S release profiles are characterized using 2,6-dansyl azide (2), an H2S specific fluorescent probe. Most compounds have anticancer activity in several solid tumor cell lines and are less toxic in a normal human lung fibroblast, WI38. A preferred compound, 14, with 10-fold greater anticancer activity than 1, was shown to release H2S in MCF7 cells using a cell active probe, 21. Both permeability and intracellular pH (pHi) were found to be significantly improved for 14 compared to 1. Furthermore, 14 was also negative in the AMES test for genotoxicity. Cyclization of these initial structures gave a series of 2,3-dihydro-2-phenyl-2-sulfanylenebenzo[d][1,3,2]oxazaphospholes, of which the simplest member, compound 22 (FW1256), was significantly more potent in cells. The improved therapeutic window of 22 in WI38 cells was compared with three other cell types. Potency of 22 was superior to 1 in MCF7 tumor spheroids and the mechanism of cell death was shown to be via apoptosis with an increase in cleaved PARP and activated caspase-7. Evidence of H2S release in cells is also presented. This work provides a "toolbox" of slow-release H2S donors useful for studies of H2S in biology and as potential therapeutics in cancer, inflammation, and cardiovascular disease.
Publisher: American Chemical Society (ACS)
Date: 22-03-2019
Abstract: Dietary flavonoids are known as scavengers of reactive oxygen species such as hypochlorous acid. In spite of the abundant scavenging capacity data reported, few reports have addressed the relationship between the scavenging capacity and structures of different flavonoids. We characterized the reaction products of five flavonoids (apigenin, quercetin, naringenin, elopsin, and epicatechin) with hypochlorous acid and found that primary chlorination reaction occurred on the A-ring (C6 or C8) and/or C-rings but not on B-rings. Correlation of the hypochlorous acid scavenging capacity (IC
Publisher: Springer International Publishing
Date: 2018
Publisher: American Chemical Society (ACS)
Date: 03-12-2018
Abstract: Herein, we report on fluorophore-tagged Grubbs catalysts as turn-on fluorescent probes for the sensitive detection and quantitation of ethylene, a plant hormone that plays a critical role in many phases of plant growth and fruit ripening. The ruthenium-based weak fluorescent probes were prepared handily through the metathesis reaction between the first-generation Grubbs catalyst and selected fluorophores that have high quantum yields and contain terminal vinyl groups. Upon exposure to ethylene, fluorescence enhancement was observed via the release of fluorophore from the probe. Our probe shows an excellent limit of detection for ethylene at 0.9 ppm in air and was successfully applied for monitoring ethylene released during the fruit-ripening process. Our work opens up a new avenue of application of Grubbs catalysts for bioanalytical chemistry of ethylene, which is critically important in plant biology, agriculture, and food industry.
No related grants have been discovered for Dejian Huang.