ORCID Profile
0000-0003-4611-7100
Current Organisations
University of California, Irvine
,
Oregon State University
,
Laurentian University
,
University of South Carolina
,
University of North Carolina
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Publisher: Proceedings of the National Academy of Sciences
Date: 17-12-2013
Abstract: Here we present a fluctuation-based approach to biosensor Förster resonance energy transfer (FRET) detection that can measure the molecular flow and signaling activity of proteins in live cells. By simultaneous use of the phasor approach to fluorescence lifetime imaging microscopy (FLIM) and cross–pair correlation function (pCF) analysis along a line scanned in milliseconds, we detect the spatial localization of Rho GTPase activity (biosensor FRET signal) as well as the diffusive route adopted by this active population. In particular we find, for Rac1 and RhoA, distinct gradients of activation (FLIM-FRET) and a molecular flow pattern (pCF analysis) that explains the observed polarized GTPase activity. This multiplexed approach to biosensor FRET detection serves as a unique tool for dissection of the mechanism(s) by which key signaling proteins are spatially and temporally coordinated.
Publisher: American Association for the Advancement of Science (AAAS)
Date: 18-03-2022
Abstract: Urbanization transforms environments in ways that alter biological evolution. We examined whether urban environmental change drives parallel evolution by s ling 110,019 white clover plants from 6169 populations in 160 cities globally. Plants were assayed for a Mendelian antiherbivore defense that also affects tolerance to abiotic stressors. Urban-rural gradients were associated with the evolution of clines in defense in 47% of cities throughout the world. Variation in the strength of clines was explained by environmental changes in drought stress and vegetation cover that varied among cities. Sequencing 2074 genomes from 26 cities revealed that the evolution of urban-rural clines was best explained by adaptive evolution, but the degree of parallel adaptation varied among cities. Our results demonstrate that urbanization leads to adaptation at a global scale.
Publisher: Proceedings of the National Academy of Sciences
Date: 07-09-2010
Abstract: No methods proposed thus far have the capability to measure overall molecular flow in the nucleus of living cells. Here, we apply the pair correlation function analysis (pCF) to measure molecular anisotropic diffusion in the interphase nucleus of live cells. In the pCF method, we cross-correlate fluctuations at several distances and locations within the nucleus, enabling us to define migration paths and barriers to diffusion. We use monomeric EGFP as a prototypical inert molecule and measure flow in and between different nuclear environments. Our results suggest that there are two disconnect molecular flows throughout the nucleus associated with high and low DNA density regions. We show that different density regions of DNA form a networked channel that allows EGFP to diffuse freely throughout, however with restricted ability to traverse the channel. We also observe rare and sudden bursts of molecules traveling across DNA density regions with characteristic time of ≈300 ms, suggesting intrinsic localized change in chromatin structure. This is a unique in vivo demonstration of the intricate chromatin network showing channel directed diffusion of an inert molecule with high spatial and temporal resolution.
Publisher: Elsevier BV
Date: 02-2012
Publisher: Elsevier BV
Date: 12-2011
Publisher: Elsevier BV
Date: 05-2017
Publisher: Wiley
Date: 19-08-2012
DOI: 10.1002/JEMT.21054
Publisher: Elsevier BV
Date: 04-2011
Publisher: Elsevier BV
Date: 03-2015
Location: United States of America
No related grants have been discovered for Michelle Digman.