A portable RNA-editing machine. Many plants maintain an elaborate RNA-editing machine that allows them to correct accumulated errors in their organellar genomes by specifically editing the RNA transcripts of the affected genes. A portable and adaptable version of this molecular machine would have significant biotechnological value, providing the ability to correct genetic errors, and to intervene in gene regulation without permanently altering a genome. The project aims to combine molecular and ....A portable RNA-editing machine. Many plants maintain an elaborate RNA-editing machine that allows them to correct accumulated errors in their organellar genomes by specifically editing the RNA transcripts of the affected genes. A portable and adaptable version of this molecular machine would have significant biotechnological value, providing the ability to correct genetic errors, and to intervene in gene regulation without permanently altering a genome. The project aims to combine molecular and structural biology approaches to fully characterise the components of the machine, thus allowing us to reconstitute it in cell-free systems and ultimately in other organisms.Read moreRead less
Mastering pyrimidine editing in RNA. Many plants and animals can alter their genetic information via RNA (ribonucleic acid) editing, a process that is often essential for the growth and development of the organism. This ability provides accurate control over gene expression and has great potential as a biotechnological tool in agriculture and medicine. RNA editing could be used to switch genes on or off in biotechnological production systems with an unprecedented degree of precision, or to corre ....Mastering pyrimidine editing in RNA. Many plants and animals can alter their genetic information via RNA (ribonucleic acid) editing, a process that is often essential for the growth and development of the organism. This ability provides accurate control over gene expression and has great potential as a biotechnological tool in agriculture and medicine. RNA editing could be used to switch genes on or off in biotechnological production systems with an unprecedented degree of precision, or to correct genetic diseases. This project aims to understand two RNA editing pathways in plants, one of which is found nowhere else and likely to involve a novel enzymatic mechanism. We will use the understanding gained to develop novel RNA processing tools usable in any living organism.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE160100893
Funder
Australian Research Council
Funding Amount
$364,000.00
Summary
How do effector proteins from necrotrophic fungi cause disease in plants? This project aims to develop new knowledge to support the development of strategies to protect wheat from necrotrophic fungi. Crop losses caused by plant diseases are a significant economic, environmental and social challenge in a world facing increased demands on food, fibre and biofuels. Parastagonospora nodorum is an economically important necrotrophic fungal pathogen of wheat. During infection, P. nodorum uses effector ....How do effector proteins from necrotrophic fungi cause disease in plants? This project aims to develop new knowledge to support the development of strategies to protect wheat from necrotrophic fungi. Crop losses caused by plant diseases are a significant economic, environmental and social challenge in a world facing increased demands on food, fibre and biofuels. Parastagonospora nodorum is an economically important necrotrophic fungal pathogen of wheat. During infection, P. nodorum uses effector proteins to target sensitivity gene products in wheat. This process, known as necrotrophic effector-triggered susceptibility, results in plant cell death and disease. This project aims to investigate the structural basis of necrotrophic effector-triggered susceptibility in the P. nodorum – wheat pathosystem.Read moreRead less
Can we engineer plants to grow on salty soils? This project aims to answer questions about how plants can sustain their growth on salty soils. Plant-derived products constitute a pillar for our society. However, crop yields may be severely penalised due to unfavourable growth conditions, including soil salinity. This is particularly relevant for Australia as a large fraction of its arable land is affected by salt. This project aims to use molecular and cell biology techniques to resolve mechanis ....Can we engineer plants to grow on salty soils? This project aims to answer questions about how plants can sustain their growth on salty soils. Plant-derived products constitute a pillar for our society. However, crop yields may be severely penalised due to unfavourable growth conditions, including soil salinity. This is particularly relevant for Australia as a large fraction of its arable land is affected by salt. This project aims to use molecular and cell biology techniques to resolve mechanisms of how the synthesis of cellulose, which constitutes the bulk of a plant's biomass, is maintained in plants during salt stress. This project has potential for climate change mitigation, enhanced plant biomass production and improved fuel security.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE210100323
Funder
Australian Research Council
Funding Amount
$431,000.00
Summary
Synthetic biology to engineer novel disease resistance in cereal crops. This project aims to engineer disease resistance in crops to dangerous fungal pathogens. The strategy is to exploit our knowledge of the plant immune system using structural biology and directed evolution of natural resistance genes, improving their ability to recognise and respond to fungal attack. Fungal pathogens cause some of the most harmful crop diseases in Australia and worldwide. The rapid evolution of fungi overcome ....Synthetic biology to engineer novel disease resistance in cereal crops. This project aims to engineer disease resistance in crops to dangerous fungal pathogens. The strategy is to exploit our knowledge of the plant immune system using structural biology and directed evolution of natural resistance genes, improving their ability to recognise and respond to fungal attack. Fungal pathogens cause some of the most harmful crop diseases in Australia and worldwide. The rapid evolution of fungi overcomes natural plant resistance and management of these diseases is a major challenge to agriculture. Expected outcomes of the project include engineered wheat plants with more effective disease resistance, reducing fungicide usage. This project intends to accelerate crop breeding and contribute to world food security.Read moreRead less
The chemistry and biology of circular proteins. This project aims to develop plant-derived ultra-stable cyclic peptides for pharmaceutical and agricultural applications. The project will use innovative new methodologies for discovery, chemical synthesis and engineering of these molecules. It is expected that the project will contribute to high value biotechnology and agricultural industries in Australia. The proposed outcomes will include fundamental new knowledge on the biosynthesis of circular ....The chemistry and biology of circular proteins. This project aims to develop plant-derived ultra-stable cyclic peptides for pharmaceutical and agricultural applications. The project will use innovative new methodologies for discovery, chemical synthesis and engineering of these molecules. It is expected that the project will contribute to high value biotechnology and agricultural industries in Australia. The proposed outcomes will include fundamental new knowledge on the biosynthesis of circular proteins in plants, new approaches for their discovery and technologies for applying them as drug leads and agricultural products.Read moreRead less
Molecular basis for susceptibility and immunity to Fusarium wilt disease. Fusarium wilt is a devastating disease of many important crop plants, including banana, cotton and tomato. There are significant gaps in our understanding of this disease that need to be addressed to enable better disease management. This project aims to identify and analyse tomato proteins targeted by Fusarium effector proteins (virulence factors), determine how corresponding tomato receptors (resistance proteins) recogni ....Molecular basis for susceptibility and immunity to Fusarium wilt disease. Fusarium wilt is a devastating disease of many important crop plants, including banana, cotton and tomato. There are significant gaps in our understanding of this disease that need to be addressed to enable better disease management. This project aims to identify and analyse tomato proteins targeted by Fusarium effector proteins (virulence factors), determine how corresponding tomato receptors (resistance proteins) recognise these effectors, and identify the signalling pathways and critical defence responses activated by these receptors. The intention is to close the gaps in our understanding and use the knowledge gained to develop new strategies for disease control by interfering with fungal pathogenicity and enhancing plant resistance.Read moreRead less
Elucidating the molecular basis of plant potyvirus resistance . Plant viruses are responsible for a large proportion of crop losses, and genetic resistance is currently the most effective means to control viral spread. This project investigates, on a molecular and structural level, host factors that plant viruses hijack during infection, and in particular, the mutations in these factors that confer resistance. We further aim to elucidate the mechanisms by which plant viruses overcome resistance ....Elucidating the molecular basis of plant potyvirus resistance . Plant viruses are responsible for a large proportion of crop losses, and genetic resistance is currently the most effective means to control viral spread. This project investigates, on a molecular and structural level, host factors that plant viruses hijack during infection, and in particular, the mutations in these factors that confer resistance. We further aim to elucidate the mechanisms by which plant viruses overcome resistance mediated by these host factors. A detailed understanding of the molecular interactions between plant viruses and their host will enable new, robust and more effective forms of resistance to be engineered. This work therefore has economic and environmental implications for agricultural productivity in Australia. Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE180101445
Funder
Australian Research Council
Funding Amount
$365,058.00
Summary
Structure-based investigations into new modes of action for herbicides. This project aims to focus on identifying and providing protein structure information for new protein targets against which herbicides can be developed. Food security for a growing population relies on agriculture, which in turn relies on herbicides. Presently, herbicide efficacy is under serious threat from resistant weeds. In this project, innovative applications of chemical libraries and exploiting a little-known connect ....Structure-based investigations into new modes of action for herbicides. This project aims to focus on identifying and providing protein structure information for new protein targets against which herbicides can be developed. Food security for a growing population relies on agriculture, which in turn relies on herbicides. Presently, herbicide efficacy is under serious threat from resistant weeds. In this project, innovative applications of chemical libraries and exploiting a little-known connection between plants and human parasites will help to resolve the structure of herbicide targets for the development of new herbicides to ensure future food security.Read moreRead less
Understanding the molecular basis of fungal rust diseases in plants. This project aims to utilise structural biology, biochemistry and molecular biology approaches to substantially deepen our understanding of rust fungi-plant interactions. Fungal rust pathogens cause disease and significant yield losses in our most important food crops. During colonisation, rust fungi utilise secreted effector proteins to cause plant disease. Effectors can also be recognised by plant immunity receptors, leading ....Understanding the molecular basis of fungal rust diseases in plants. This project aims to utilise structural biology, biochemistry and molecular biology approaches to substantially deepen our understanding of rust fungi-plant interactions. Fungal rust pathogens cause disease and significant yield losses in our most important food crops. During colonisation, rust fungi utilise secreted effector proteins to cause plant disease. Effectors can also be recognised by plant immunity receptors, leading to resistance. The intended outcome of this work is to generate knowledge that can be used for the development of disease management and engineering strategies to protect plants from rust fungi. This should provide significant benefits to agricultural productivity and global food security.Read moreRead less