Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0668507
Funder
Australian Research Council
Funding Amount
$260,000.00
Summary
Real time PCR and nanoparticle diagnostic facilities for high-throughput quantitative analysis of genomic structure and gene expression. Modern molecular tools have lead to an explosion in genome projects and unification of all areas of biology. The most basic need for such research is access to improving technologies for detecting DNA fingerprints that distinguish genetically-diverse genes, and determining which genes are "switched on" or 'off' in various situations. Real time PCR technology, ....Real time PCR and nanoparticle diagnostic facilities for high-throughput quantitative analysis of genomic structure and gene expression. Modern molecular tools have lead to an explosion in genome projects and unification of all areas of biology. The most basic need for such research is access to improving technologies for detecting DNA fingerprints that distinguish genetically-diverse genes, and determining which genes are "switched on" or 'off' in various situations. Real time PCR technology, pioneered by The University of Queensland (UQ) and Southern Cross University (SCU) using ARC funding in 1996, is now the technology of choice for much of this research. This project will provide high-throughput equipment for real time PCR, and will develop complementary high-throughput "nanoparticle" DNA genotyping technologies, with applications to medicine and agriculture.
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Control of Wolbachia replication: maintaining a stable symbiosis. This project will use a comparative genomics approach to better understand how Wolbachia infections of insects are able to maintain themselves in insects without causing pathology. The results will allow us to better understand a distinguishing characteristic of an intracellular symbiont, namely replication control. The results also have the potential to lead to new approaches to insect pest control through a better understanding ....Control of Wolbachia replication: maintaining a stable symbiosis. This project will use a comparative genomics approach to better understand how Wolbachia infections of insects are able to maintain themselves in insects without causing pathology. The results will allow us to better understand a distinguishing characteristic of an intracellular symbiont, namely replication control. The results also have the potential to lead to new approaches to insect pest control through a better understanding of how Wolbachia might be used to skew insect population age structure.Read moreRead less
A New Window into Transgene Silencing in Plants: mechanisms of copy-number independent, 5' sequence dependent, post-transcriptional silencing in a complex polyploid. Silencing of introduced genes is a major problem limiting plant molecular improvement. Sugarcane, a complex polyploid, shows the most efficient transgene silencing ever observed in plants. Silencing operates on the RNA, depends on the upstream sequence of the gene, and is independent of copy number. Other plant species develop endop ....A New Window into Transgene Silencing in Plants: mechanisms of copy-number independent, 5' sequence dependent, post-transcriptional silencing in a complex polyploid. Silencing of introduced genes is a major problem limiting plant molecular improvement. Sugarcane, a complex polyploid, shows the most efficient transgene silencing ever observed in plants. Silencing operates on the RNA, depends on the upstream sequence of the gene, and is independent of copy number. Other plant species develop endopolyploidy with age, and show unpredictable or patchy silencing. We speculate that differential silencing is a natural control mechanism in the exploitation of polyploidy in plants. The sugarcane system provides an exceptional opportunity to identify the sequences that trigger and protect from silencing, and to develop approaches to avoid the problem.Read moreRead less
Origin of animal sensory and nervous systems: a case study in cell type evolution. The origin of the nerve cell and the nervous system allowed the first animals to interact with their biotic and abiotic environment in rapid and complex ways. These capabilities are the primary agents for success in the animal kingdom, underpinning the ability to capture food, avoid predation, and find a mate. These same nerve cells have bestowed on the human brain cognitive abilities that have driven our biologic ....Origin of animal sensory and nervous systems: a case study in cell type evolution. The origin of the nerve cell and the nervous system allowed the first animals to interact with their biotic and abiotic environment in rapid and complex ways. These capabilities are the primary agents for success in the animal kingdom, underpinning the ability to capture food, avoid predation, and find a mate. These same nerve cells have bestowed on the human brain cognitive abilities that have driven our biological and cultural evolution. Despite the phenomenal importance of the nerve cell, we know almost nothing about its origin and early evolution. This basic research project seeks to make a major contribution towards addressing this gap in knowledge.Read moreRead less
Ecological significance of coral disease on the Great Barrier Reef. Coral disease has contributed significantly to the accelerating deterioration of coral reefs globally, but its impact on the Great Barrier Reef is unknown. This project will determine the prevalence of coral disease on the GBR and evaluate the potential threat it poses to reef health. It will build Australian capacity in the ecology and pathology of coral disease, an emergent global research priority, and provide an important ....Ecological significance of coral disease on the Great Barrier Reef. Coral disease has contributed significantly to the accelerating deterioration of coral reefs globally, but its impact on the Great Barrier Reef is unknown. This project will determine the prevalence of coral disease on the GBR and evaluate the potential threat it poses to reef health. It will build Australian capacity in the ecology and pathology of coral disease, an emergent global research priority, and provide an important benchmark for determining whether disease incidence is increasing. It will provide insights into potential links between environmental / anthropogenic stressors and disease incidence, and identify potential threats to coral reef health.Read moreRead less
Aquatic eye design: sharks and rays as models of underwater colour and luminance vision. Sharks are usually assumed to be colour blind. We have discovered that they may in fact see colour very well and that the eyes of different species are adapted to their particular lifestyles. Our research will help to raise the profile of sharks and portray them as animals with advanced sensory systems and complex visual behaviours rather than just dangerous killing machines. Studying the vision of sharks m ....Aquatic eye design: sharks and rays as models of underwater colour and luminance vision. Sharks are usually assumed to be colour blind. We have discovered that they may in fact see colour very well and that the eyes of different species are adapted to their particular lifestyles. Our research will help to raise the profile of sharks and portray them as animals with advanced sensory systems and complex visual behaviours rather than just dangerous killing machines. Studying the vision of sharks may also help to reduce the number (currently >50,000) that are killed each year as bycatch by Australian long-line fisheries and make a valuable contribution to one of Australia's National Research Priorities (an Environmentally Sustainable Australia) for managing and conserving our biodiversity.Read moreRead less
Efficient organelle transformation. Chloroplasts and mitochondria are the powerhouses of plant and animal cells. Ability to express introduced genes in these organelles has enormous biotechnological potential in agriculture and medicine, but practical development has been almost stalled for 15 years by very low transformation efficiency. Plastid transformation is today routine only in tobacco; and mitochondrial transformation has been achieved only in yeasts and algae. We have developed a soluti ....Efficient organelle transformation. Chloroplasts and mitochondria are the powerhouses of plant and animal cells. Ability to express introduced genes in these organelles has enormous biotechnological potential in agriculture and medicine, but practical development has been almost stalled for 15 years by very low transformation efficiency. Plastid transformation is today routine only in tobacco; and mitochondrial transformation has been achieved only in yeasts and algae. We have developed a solution, and achieved the key technical requirements for proof of concept. This collaboration between industry, government and university partners will deliver key Australian-owned IP, for environmentally-friendly plant biofactories, and for treatment of mitochondrial genetic disorders.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0347875
Funder
Australian Research Council
Funding Amount
$280,000.00
Summary
Enhanced genetic analysis facilities at James Cook University. The acquisition of molecular data, DNA sequences or allele frequencies, is the major requirement of almost all laboratory research in the life sciences, and is the rate-limiting step for many research projects locally. The current application underpins novel research initiatives at James Cook University, and is intended to provide centralized state-of-the-art high throughput DNA sequencing and genotyping facility for the north Queens ....Enhanced genetic analysis facilities at James Cook University. The acquisition of molecular data, DNA sequences or allele frequencies, is the major requirement of almost all laboratory research in the life sciences, and is the rate-limiting step for many research projects locally. The current application underpins novel research initiatives at James Cook University, and is intended to provide centralized state-of-the-art high throughput DNA sequencing and genotyping facility for the north Queensland life sciences community.Read moreRead less
Vision and remote sensing: using nature's technology to examine the health of The Great Barrier Reef and Moreton Bay. We aim to use what is known and what we will discover about animals visual systems to examine environmental health on The Great Barrier Reef and Moreton Bay. Technology and knowledge from 8 university departments, 4 industry partners, and 7 international collaborators will be combined to both learn and provide information. The innovative aspect of our approach is to examine the w ....Vision and remote sensing: using nature's technology to examine the health of The Great Barrier Reef and Moreton Bay. We aim to use what is known and what we will discover about animals visual systems to examine environmental health on The Great Barrier Reef and Moreton Bay. Technology and knowledge from 8 university departments, 4 industry partners, and 7 international collaborators will be combined to both learn and provide information. The innovative aspect of our approach is to examine the world with the eyes of birds, fish and invertebrates. Tricks animals employ to solve visual tasks will be implemented at scales of instrumentation from hand-held to remote sensing and used to address problems such as coral reef bleaching.Read moreRead less
Early life-history sex determination in reef fishes. In many fishes, gender is influenced by environmental conditions experienced after hatching. However, the timing, cues, and developmental pathways of sex determination are poorly understood. This research will establish how environmental conditions during the juvenile phase control patterns of sex determination in reef fishes and determine if sex differentiation is a response to local- or broad-scale environmental cues. An individual's gender ....Early life-history sex determination in reef fishes. In many fishes, gender is influenced by environmental conditions experienced after hatching. However, the timing, cues, and developmental pathways of sex determination are poorly understood. This research will establish how environmental conditions during the juvenile phase control patterns of sex determination in reef fishes and determine if sex differentiation is a response to local- or broad-scale environmental cues. An individual's gender has profound and significant consequences for all aspects of its biology and the mechanism of sex determination has important implications for population ecology. This project will test theory in evolutionary ecology and greatly benefit the management of reef fisheries.Read moreRead less