Cultivating numerically significant soil bacteria. The vast majority of soil bacteria have not been able to be studied in the laboratory because they cannot be grown outside the soil. They are therefore termed unculturable. Most of these belong to groups that are completely unstudied. Advances made in the Janssen lab have overcome this impediment to laboratory cultivation of numerically abundant and globally distributed soil bacteria. This project will develop these advances to generate simple a ....Cultivating numerically significant soil bacteria. The vast majority of soil bacteria have not been able to be studied in the laboratory because they cannot be grown outside the soil. They are therefore termed unculturable. Most of these belong to groups that are completely unstudied. Advances made in the Janssen lab have overcome this impediment to laboratory cultivation of numerically abundant and globally distributed soil bacteria. This project will develop these advances to generate simple and widely applicable methods to enable many of the previously unculturable soil bacteria to be studied. This will allow assessments of their ecological roles and biotechnological potentials to be made.Read moreRead less
Was there an unusual environment with equally remarkable inhabitants in Early Cretaceous southeast Australia? After more than two decades of effort, there is strong evidence that Early Cretaceous southeastern Australia was inhabited by a remarkably diverse polar terrestrial vertebrate fauna adapted to the coldest environment known to have existed anywhere in the late Mesozoic. In this unusual terrestrial habitat for that time, temnospondyl amphibians and allosaurid dinosaurs survived long ....Was there an unusual environment with equally remarkable inhabitants in Early Cretaceous southeast Australia? After more than two decades of effort, there is strong evidence that Early Cretaceous southeastern Australia was inhabited by a remarkably diverse polar terrestrial vertebrate fauna adapted to the coldest environment known to have existed anywhere in the late Mesozoic. In this unusual terrestrial habitat for that time, temnospondyl amphibians and allosaurid dinosaurs survived long after becoming extinct elsewhere. Here, too, are found what may be the oldest known and yet remarkably advanced placental mammals, the group to which we belong. To further corroborate or refute these hypotheses, some of which are highly contentious, is the aim of this project.Read moreRead less
Molecular evolution and toxinology of colubrid snake venom toxins. This project proposes to examine the origin and evolution of venom systems in advanced snakes (Caenophidia) focusing on the colubrid radiation comprising the rear-fanged species. Demonstration by us of the presence of a potent postsynaptic neurotoxin in the Durvenoy's secretions of the Asian ratsnake Elaphe radiata, an archetypal non-venomous colubrid species, forced a fundamental rethink of venom evolution. The toxin is homologo ....Molecular evolution and toxinology of colubrid snake venom toxins. This project proposes to examine the origin and evolution of venom systems in advanced snakes (Caenophidia) focusing on the colubrid radiation comprising the rear-fanged species. Demonstration by us of the presence of a potent postsynaptic neurotoxin in the Durvenoy's secretions of the Asian ratsnake Elaphe radiata, an archetypal non-venomous colubrid species, forced a fundamental rethink of venom evolution. The toxin is homologous with the three finger toxins, previously thought unique to elapids, and supports the role of venom as a key evolutionary innovation in the diversification of advanced snakes. This project extends this work to other species and toxin families.Read moreRead less
Mechanisms of colour production and the evolution of animal signals. This project aims to reveal how diverse colours are produced in reptiles and the information these colours convey about individual health, condition and performance. The project evaluates how stress affects both pigment deposition and the nano-structure of cells and tissues, which together produce colour. By comparing similar colours generated by two entirely different classes of pigment (carotenoids and pteridines), this proje ....Mechanisms of colour production and the evolution of animal signals. This project aims to reveal how diverse colours are produced in reptiles and the information these colours convey about individual health, condition and performance. The project evaluates how stress affects both pigment deposition and the nano-structure of cells and tissues, which together produce colour. By comparing similar colours generated by two entirely different classes of pigment (carotenoids and pteridines), this project will provide new insights into the evolution of animal coloration, and will significantly enhance our understanding of pteridines, one of the most prevalent but least understood classes of pigment in vertebrates.Read moreRead less
Old brains, new data - early evolution of structural complexity in the vertebrate head. Of the all the complex structures biology has provided, the evolution of the vertebrate brain and its sensory organs is perhaps the most enigmatic. The fossil record occasionally provides a chance to trace this evolution, but only with the use of novel X-ray scanning techniques can these secrets be detailed in three dimensions. Exploiting the exceptional fossil record from Australia and China, this team will ....Old brains, new data - early evolution of structural complexity in the vertebrate head. Of the all the complex structures biology has provided, the evolution of the vertebrate brain and its sensory organs is perhaps the most enigmatic. The fossil record occasionally provides a chance to trace this evolution, but only with the use of novel X-ray scanning techniques can these secrets be detailed in three dimensions. Exploiting the exceptional fossil record from Australia and China, this team will for the first time collect a vast comparative data base which will yield clues on the early evolution of the ear, eye and brain. Read moreRead less
Genome dynamics following plastid endosymbiosis. Plastid endosymbiosis events (enslavement of an algal cell inside of a host cell to form a plastid) are difficult to pinpoint because the genomic data required for a broad array of species are rarely available. Furthermore, the classical method used to infer endosymbiotic gene transfers is being criticised. This project will elucidate the origin of chlorarachniophyte and dinoflagellate plastids and characterise the genome dynamics following endosy ....Genome dynamics following plastid endosymbiosis. Plastid endosymbiosis events (enslavement of an algal cell inside of a host cell to form a plastid) are difficult to pinpoint because the genomic data required for a broad array of species are rarely available. Furthermore, the classical method used to infer endosymbiotic gene transfers is being criticised. This project will elucidate the origin of chlorarachniophyte and dinoflagellate plastids and characterise the genome dynamics following endosymbiosis. It uses densely sampled genome data obtained with high-throughput sequencing technologies. Simulation studies will be used to evaluate methods for inferring endosymbiotic gene transfer and alignment-free methods will be used to improve phylogenomic pipelines.Read moreRead less
Turning Selaginella into a model of plant reproductive evolution and ecology. The ancient genus Selaginella can reveal how natural selection shaped fundamental traits of plant reproduction like morphological differentiation of spores (a prerequisite for the evolution of seeds) and sexual division of reproductive investment. However, almost nothing is known of the ‘ecological theatre’ in which Selaginella evolves. This project will examine the worldwide phylogenetic pattern of reproductive traits ....Turning Selaginella into a model of plant reproductive evolution and ecology. The ancient genus Selaginella can reveal how natural selection shaped fundamental traits of plant reproduction like morphological differentiation of spores (a prerequisite for the evolution of seeds) and sexual division of reproductive investment. However, almost nothing is known of the ‘ecological theatre’ in which Selaginella evolves. This project will examine the worldwide phylogenetic pattern of reproductive traits in the genus, and combine field and greenhouse studies of Australian and Malaysian species in order to test fundamental ideas in evolutionary ecology such as the theory of sex allocation, and begin to establish the ecological and adaptive counterpart to Selaginella’s emerging role as a genomic model organism.Read moreRead less
Australia's exceptional Palaeozoic fossil fishes, and a Gondwana origin for land vertebrates. The 370 million-year-old Gogo deposit in WA has produced the World's best-preserved fossil fishes of Devonian age. New discoveries of related forms in eastern and central Australia document the deep history of Australia's unique vertebrate fauna, and provide new evidence on the evolution of the first jaws and limbs in vertebrates. They indicate that the first land animals may have evolved on the Austral ....Australia's exceptional Palaeozoic fossil fishes, and a Gondwana origin for land vertebrates. The 370 million-year-old Gogo deposit in WA has produced the World's best-preserved fossil fishes of Devonian age. New discoveries of related forms in eastern and central Australia document the deep history of Australia's unique vertebrate fauna, and provide new evidence on the evolution of the first jaws and limbs in vertebrates. They indicate that the first land animals may have evolved on the Australian landmass. These remarkably preserved, information-rich skulls and braincases of some of the oldest known vertebrate fossils provide unique data on early evolution of the head and brain; they are held in national collections as a significant contribution to both National and World Heritage.Read moreRead less
Testing Theories of Historical Divergence using South Eastern Australian Reptiles. The processes that serve to create species diversity must also be preserved in order to allow evolution to continue. My study will clarify the number and distribution of water skink species in south eastern Australia, a biologically diverse, yet under studied area of Australia. I will also be looking at processes, such as dispersal, that determine patterns of species distribution over time. These lizards are also ....Testing Theories of Historical Divergence using South Eastern Australian Reptiles. The processes that serve to create species diversity must also be preserved in order to allow evolution to continue. My study will clarify the number and distribution of water skink species in south eastern Australia, a biologically diverse, yet under studied area of Australia. I will also be looking at processes, such as dispersal, that determine patterns of species distribution over time. These lizards are also found on mountain tops and may be affected by global warming. Understanding how climate change has affected these lizards in the past may help us to predict how climate changes will affect them in the future and better enable us to conserve these and other species in the future.Read moreRead less
Uncovering vertebrate lifespan biodiversity with whole genome sequencing. This project aims to integrate existing data on the genetic mechanisms of lifespan evolution in model systems with a novel combination of whole genome sequencing and comparative phylogenomics to reveal the common genomic signatures of lifespan evolution in vertebrates. Expected outcomes include a perspective on the evolution of lifespan, a topic of major health interest for Australia and the rest of the developed world. Th ....Uncovering vertebrate lifespan biodiversity with whole genome sequencing. This project aims to integrate existing data on the genetic mechanisms of lifespan evolution in model systems with a novel combination of whole genome sequencing and comparative phylogenomics to reveal the common genomic signatures of lifespan evolution in vertebrates. Expected outcomes include a perspective on the evolution of lifespan, a topic of major health interest for Australia and the rest of the developed world. This will provide significant benefits, such as long-term implications for aging research, with possible business applications. It will also increase Australia’s visibility and competitiveness in the developing field of bioinformatics.Read moreRead less