Who’s who in the plant gene world? As many more plant genomes are sequenced, the bottleneck is being able to interrogate and translate this data into applications for crop improvement. This project will develop and apply a population graph database, hosting genome data for the world’s major crops and their wild relatives, allowing the characterisation of gene diversity on an unparalleled scale. Analysis of this data will reveal the presence/absence and sequence diversity for classes of genes for ....Who’s who in the plant gene world? As many more plant genomes are sequenced, the bottleneck is being able to interrogate and translate this data into applications for crop improvement. This project will develop and apply a population graph database, hosting genome data for the world’s major crops and their wild relatives, allowing the characterisation of gene diversity on an unparalleled scale. Analysis of this data will reveal the presence/absence and sequence diversity for classes of genes for important agronomic traits including disease resistance, flowering time and legume nitrogen fixation which will enable plant breeders to identify and apply novel genes and allelic variants for use in breeding programmes, accelerating the production of improved crop varieties.Read moreRead less
Carboxylate exudation and phosphorus acquisition in eucalypts. Eucalypts are thought to rely on mycorrhizas to acquire phosphorus (P). Using leaf manganese concentrations in the field to proxy rhizosphere carboxylates, followed by plant growth in low P-solutions, it was shown that some, but not all eucalypts that grow on P-impoverished soils release carboxylates from their roots. This trait is a strategy of Proteaceae to access soil P, but assumed not to be used by eucalypts. This game-changing ....Carboxylate exudation and phosphorus acquisition in eucalypts. Eucalypts are thought to rely on mycorrhizas to acquire phosphorus (P). Using leaf manganese concentrations in the field to proxy rhizosphere carboxylates, followed by plant growth in low P-solutions, it was shown that some, but not all eucalypts that grow on P-impoverished soils release carboxylates from their roots. This trait is a strategy of Proteaceae to access soil P, but assumed not to be used by eucalypts. This game-changing discovery challenges the current dogma that eucalypts invariably rely on mycorrhizas to acquire P. This project will explore the significance of this newly-described trait for functioning of eucalypts more broadly and produce results that are important for conservation, restoration and forestry activities. Read moreRead less
The genomics of climate adaptation in eucalypts. This project aims to investigate validated, rapid and pragmatic solutions to managing plant and animal maladaptation caused by global environmental change. Using Australia’s iconic blue gum (Eucalyptus globulus), this project will test strategies for identifying the major climatic predictors of, and key genomic regions that underlie, adaptation to climate change. By integrating climate variables and genome sequences with field trial-derived trait ....The genomics of climate adaptation in eucalypts. This project aims to investigate validated, rapid and pragmatic solutions to managing plant and animal maladaptation caused by global environmental change. Using Australia’s iconic blue gum (Eucalyptus globulus), this project will test strategies for identifying the major climatic predictors of, and key genomic regions that underlie, adaptation to climate change. By integrating climate variables and genome sequences with field trial-derived trait and performance data from decades of research and thousands of trees, we will develop validated DNA-based tools for monitoring the rate of adaptation in our native forests and identifying climate-ready seed sources for environmental and industrial plantings.Read moreRead less
Harnessing genetic diversity for complex traits. Genetic diversity underpins crop improvement but has become increasingly narrow in our major crops. Strategies exist for mobilising simple traits (e.g. disease resistance) from wild accessions or landraces into cultivars, but there are no effective approaches for introducing complex traits, including stress tolerance or components of yield. Using barley as an important crop and a genetic model, the project aims to address this problem by applying ....Harnessing genetic diversity for complex traits. Genetic diversity underpins crop improvement but has become increasingly narrow in our major crops. Strategies exist for mobilising simple traits (e.g. disease resistance) from wild accessions or landraces into cultivars, but there are no effective approaches for introducing complex traits, including stress tolerance or components of yield. Using barley as an important crop and a genetic model, the project aims to address this problem by applying a novel approach; partial redomestication of wild accessions by introgressing genes required for modern farming, then evaluating the resulting partially adapted germplasm in hybrids with elite cultivars. The project expects to generate new and diverse germplasm pools for breeding.Read moreRead less
Molecular switches and genetic consequences of grain retention in cereals. Grain retention at maturity was key for crop domestication and laid the basis for farming. Wheat and barley have evolved a novel mechanism for ensuring grain retention and, although the genes are known, the mechanisms for action are not. Grain dispersal in the wild relatives involves highly targeted changes in the walls of a small number of cells. This project will explore how the two identified genes control this proces ....Molecular switches and genetic consequences of grain retention in cereals. Grain retention at maturity was key for crop domestication and laid the basis for farming. Wheat and barley have evolved a novel mechanism for ensuring grain retention and, although the genes are known, the mechanisms for action are not. Grain dispersal in the wild relatives involves highly targeted changes in the walls of a small number of cells. This project will explore how the two identified genes control this process and clarify their mode of action. The genes ensuring grain retention have been so critical for domestication that the region surrounding them has become genetically fixed. The project will assess the implication of fixation on genetic diversity and develop options to bring novel variation into breeding programs.Read moreRead less
Australia's native sorghums: a model for testing plant adaptation theories. This proposal tests an emerging theory that allocation of resources by plants to growth or defence are interrelated, not alternatives as currently assumed. Like many crops, sorghum produces toxic cyanide, especially during droughts but its wild relatives make much less. This project aims to discover why cyanide is so common in domesticated plants and why levels increase with stress. This has important implications for de ....Australia's native sorghums: a model for testing plant adaptation theories. This proposal tests an emerging theory that allocation of resources by plants to growth or defence are interrelated, not alternatives as currently assumed. Like many crops, sorghum produces toxic cyanide, especially during droughts but its wild relatives make much less. This project aims to discover why cyanide is so common in domesticated plants and why levels increase with stress. This has important implications for developing crops that are high yielding and also climate resilient. Expected outcomes include full genome sequences for all of Australia’s unique native sorghums, confirmation of new theories on the interrelationships between defence and growth and identification of new traits vital for developing the crops of the future. Read moreRead less
On the physiology of plant transpiration. This project aims to better understand plant transpiration. It is significant from both a basic and a practical perspective. It intends to solve a conundrum of the biophysics of the evaporative sites within leaves. That is, in dry air, the relative humidity of intercellular air spaces suggests much lower liquid water potentials than those typically measured. At a practical level, the failure to sustain transpiration in dry conditions leads to desiccation ....On the physiology of plant transpiration. This project aims to better understand plant transpiration. It is significant from both a basic and a practical perspective. It intends to solve a conundrum of the biophysics of the evaporative sites within leaves. That is, in dry air, the relative humidity of intercellular air spaces suggests much lower liquid water potentials than those typically measured. At a practical level, the failure to sustain transpiration in dry conditions leads to desiccation and tissue death, and plants differ in this vulnerability. The aim is to apply a novel nanoparticle technique to measure the water potential distribution within the leaf, identify hydraulic resilience attributes, and develop a modern theory of optimal transpiration under varying conditions.Read moreRead less
Cereal blueprints for a water-limited world. This project aims to demonstrate that key developmental genes in cereals can be manipulated to design plant architecture for specific resource-limited environments. Producing more food with less water is one of the greatest challenges facing humanity today. This project expects to increase understanding of how shoot and root systems can be uncoupled to enhance crop adaptation in water-limited environments using an accelerated genome editing approach. ....Cereal blueprints for a water-limited world. This project aims to demonstrate that key developmental genes in cereals can be manipulated to design plant architecture for specific resource-limited environments. Producing more food with less water is one of the greatest challenges facing humanity today. This project expects to increase understanding of how shoot and root systems can be uncoupled to enhance crop adaptation in water-limited environments using an accelerated genome editing approach. An expected outcome of the project is enhanced drought adaptation for cereals in a dry world. This should provide significant benefits to farmers and consumers in Australia and worldwide.Read moreRead less
Harnessing peptide hormone outputs to improve root nodulation’s efficacy. This project aims to transform our understanding of symbiotic nitrogen fixation in legume root nodules. Root nodulation sustainably fixes sizeable amounts of nitrogen to boost crop production worldwide yet its utilisation is waning in favour of using nitrogen fertilisers. The project applies cutting-edge tools to define how two hormone systems boost and limit nitrogen fixation, respectively. The project expects to reveal w ....Harnessing peptide hormone outputs to improve root nodulation’s efficacy. This project aims to transform our understanding of symbiotic nitrogen fixation in legume root nodules. Root nodulation sustainably fixes sizeable amounts of nitrogen to boost crop production worldwide yet its utilisation is waning in favour of using nitrogen fertilisers. The project applies cutting-edge tools to define how two hormone systems boost and limit nitrogen fixation, respectively. The project expects to reveal ways to reconfigure these hormone outputs to improve nodule number and the efficacy of nitrogen fixation. The findings will benefit agriculture by reducing the reliance on costly nitrogen fertilisers, thus mitigating the huge environmental damage they cause, and will provide more sustainable ways to ensure food security.Read moreRead less
A new route to controlling root system architecture and drought tolerance. This project aims to transform our understanding of the relationship between root architecture and water and nitrogen acquisition, factors critical to determining yield. We have discovered that mutants affected in a peptide hormone receptor have unique root architectural features relevant to acquiring water and nitrogen. The mutants are drought tolerant and their roots are nitrate insensitive. The project aims to define t ....A new route to controlling root system architecture and drought tolerance. This project aims to transform our understanding of the relationship between root architecture and water and nitrogen acquisition, factors critical to determining yield. We have discovered that mutants affected in a peptide hormone receptor have unique root architectural features relevant to acquiring water and nitrogen. The mutants are drought tolerant and their roots are nitrate insensitive. The project aims to define the receptor’s genetic outputs and expects to uncover new ways to improve water and nitrate acquisition and determine if our findings apply to crops. The application of these findings will reduce the severe environmental damage caused by poor nitrogen fertiliser uptake and provide sustainable ways to ensure food security.Read moreRead less