Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0561231
Funder
Australian Research Council
Funding Amount
$671,715.00
Summary
MRI GRID Computing Facility: Design, Optimisation and Image Processing. The MRI Grid Computing Facility provides the IT infrastructure to achieve effective e-research in the area of magnetic resonance (MR) imaging, a field of neuroscience research that revolutionizes the way brain diseases are identified and treated. The facility consists of a dedicated high performance grid compute engine, distributed visualisation workstations, and distributed data warehouse facilities. Software tools acc ....MRI GRID Computing Facility: Design, Optimisation and Image Processing. The MRI Grid Computing Facility provides the IT infrastructure to achieve effective e-research in the area of magnetic resonance (MR) imaging, a field of neuroscience research that revolutionizes the way brain diseases are identified and treated. The facility consists of a dedicated high performance grid compute engine, distributed visualisation workstations, and distributed data warehouse facilities. Software tools accessible through the Internet will enable researchers to archive, retrieve and exchange data and software; access distributed MR image databases and the latest MR image analysis tools; schedule analysis tasks on the grid compute engine, the outcomes of which will be visualized by the visualization workstations.Read moreRead less
eResearch in the Neurosciences: Building collaborations in Asia. The proposed Australasian collaboration on eResearch in Neuroscience will promote and maintain the good health of Australians by 'improving critical mass through collaboration and information sharing' through increased access to advanced imaging technology in Korea and analysis techniques in Japan. The collaboration will also promote frontier technologies for building and transforming Australian industries by developing a creative ....eResearch in the Neurosciences: Building collaborations in Asia. The proposed Australasian collaboration on eResearch in Neuroscience will promote and maintain the good health of Australians by 'improving critical mass through collaboration and information sharing' through increased access to advanced imaging technology in Korea and analysis techniques in Japan. The collaboration will also promote frontier technologies for building and transforming Australian industries by developing a creative and innovative research environment and enhancing Australian scientists' participation in breakthrough science. Great national benefit can be derived from international research collaboration, due to the contribution frontier technology can make to science and health. Read moreRead less
High resolution single particle analysis of biological macromolecules. One of the great challenges of cell biology is to increase the rate of atomic resolution structure determination, particularly of membrane proteins and macromolecular assemblies. The current rate-limiting step is high quality crystal production. Our goal is to prove that protein structures can be determined to atomic resolution by single-particle analysis. 3D structures will be produced by computationally aligning high-resolu ....High resolution single particle analysis of biological macromolecules. One of the great challenges of cell biology is to increase the rate of atomic resolution structure determination, particularly of membrane proteins and macromolecular assemblies. The current rate-limiting step is high quality crystal production. Our goal is to prove that protein structures can be determined to atomic resolution by single-particle analysis. 3D structures will be produced by computationally aligning high-resolution electron microscope images of individual, randomly oriented molecules. The importance of this project is highlighted by the fact over 120,000 protein sequences are already databased, a number set to increase rapidly as new genome sequencing projects are completed.
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Investigation and development of robust rule discovery and classification system. This research focuses on a national research priority, namely smart information use. The expected outcomes of the project will greatly advance intelligent system design, such as automatic decision making, fault detection and problem diagnosis, for finance, medical, telecom and many other areas. It has great potential for commercialisation and earning incomes for the future research. The publications will benefit th ....Investigation and development of robust rule discovery and classification system. This research focuses on a national research priority, namely smart information use. The expected outcomes of the project will greatly advance intelligent system design, such as automatic decision making, fault detection and problem diagnosis, for finance, medical, telecom and many other areas. It has great potential for commercialisation and earning incomes for the future research. The publications will benefit the future development of intelligent systems for dealing with missing data. This project directly supports a PhD student and two research assistants who will most likely continue their higher degree study. These contribute to regional tertiary education.Read moreRead less
Structured natural language descriptions for semantic content retrieval of visual data. The richness of visual data complicates the task of indexing their content for database retrieval. Retrieval based on semantic content is more natural than retrieval based on textures or colours but the most common approach - keyword search - lacks precision, while a newer approach - automatic parsing of free-text descriptions - lacks accuracy. We propose a system of metadata and content descriptions, where c ....Structured natural language descriptions for semantic content retrieval of visual data. The richness of visual data complicates the task of indexing their content for database retrieval. Retrieval based on semantic content is more natural than retrieval based on textures or colours but the most common approach - keyword search - lacks precision, while a newer approach - automatic parsing of free-text descriptions - lacks accuracy. We propose a system of metadata and content descriptions, where content descriptions must be phrases composed of basic grammatical terms. Description components may be elements from external resources such as thesauri and databases, providing a rich superstructure for meaningful retrieval of visual data by semantic content.Read moreRead less
An Integrated Proteomic and Bioinformatic Approach for Classifying Raw and Cooked Fish. Truth in labelling of foodstuffs is an international concern. In Australia, one of the most vulnerable industries is fishing. The fishing industry and the CSIRO have pioneered standardized fish names, but to date there is no rapid test that can provide answers that are better than 'yes' or 'no' to those who seek to enforce health and consumer regulations or provide provenance data to an industry valued at ....An Integrated Proteomic and Bioinformatic Approach for Classifying Raw and Cooked Fish. Truth in labelling of foodstuffs is an international concern. In Australia, one of the most vulnerable industries is fishing. The fishing industry and the CSIRO have pioneered standardized fish names, but to date there is no rapid test that can provide answers that are better than 'yes' or 'no' to those who seek to enforce health and consumer regulations or provide provenance data to an industry valued at $2.3Billion.
This project will develop a robust testing method based on an integrated proteomic and bioinformatics system that will ensure truth in labelling of raw and cooked fish samples for the benefit of Australia's fishing industry.Read moreRead less
Special Research Initiatives - Grant ID: SR0564829
Funder
Australian Research Council
Funding Amount
$80,000.00
Summary
Development of e-Research Tools for an MRI Grid Computing Facility. The proposed middleware tools will provide a resource management system for the national MRI grid computing facility. The main functions of the middleware tools are resource discovery and allocation, job scheduling and monitoring, workflow management and data management. The middleware tools will allow system developers and maintainers to simplify and optimize the development and deployment of MRI grid applications. The complete ....Development of e-Research Tools for an MRI Grid Computing Facility. The proposed middleware tools will provide a resource management system for the national MRI grid computing facility. The main functions of the middleware tools are resource discovery and allocation, job scheduling and monitoring, workflow management and data management. The middleware tools will allow system developers and maintainers to simplify and optimize the development and deployment of MRI grid applications. The complete system incorporating the middleware tools will provide a set of web and application-based user interfaces that allow secure, seamless and uniform access to resources in a heterogeneous grid environment.Read moreRead less
Data Management Technologies for the Magnetic Resonance Imaging e-Research Grid. Howard Florey Institute researchers will collaborate with SGI's file-systems engineering team. Substantial benefits are expected from the development of techniques to support centralized and distributed processing medical image datasets. Issues requiring research include file space allocation algorithms and caching strategies. The proposed rapid database access technologies aim at solving these problems in the medic ....Data Management Technologies for the Magnetic Resonance Imaging e-Research Grid. Howard Florey Institute researchers will collaborate with SGI's file-systems engineering team. Substantial benefits are expected from the development of techniques to support centralized and distributed processing medical image datasets. Issues requiring research include file space allocation algorithms and caching strategies. The proposed rapid database access technologies aim at solving these problems in the medical imaging research context. The project attempts to 'improve data management for existing and new business applications'. This enhanced sharing of information will improve critical mass therefore fostering national and international collaboration. Read moreRead less
Automatic audio segmentation, classification, identification, search and retrieval. The research aims to develop generic tools for automated audio segmentation, classification, identification and search, with lowest possible computational complexity and highest accuracy and speed. The tools will be applicable to audio archive management, search of audio material over WWW and personal archives of music and audio-assisted video analysis. The industry will use the tools for automated broadcast ve ....Automatic audio segmentation, classification, identification, search and retrieval. The research aims to develop generic tools for automated audio segmentation, classification, identification and search, with lowest possible computational complexity and highest accuracy and speed. The tools will be applicable to audio archive management, search of audio material over WWW and personal archives of music and audio-assisted video analysis. The industry will use the tools for automated broadcast verification and identification for copyright surveillance and calculation of royalty payments, aiming to penetrate both Australian and overseas markets. The area of real-time audio scene analysis is in its infancy and the research aims to make significant contributions to this area.Read moreRead less
Generic Content-based News Picture Retrieval with Local Invariant Features. Image Retrieval searches for images from large databases whose visual content meets the requirements submitted by users. Besides directly benefiting the Partner Organization, this project will enable more efficient access to large picture repositories in news agencies and publishers, digital libraries and film archives. It will make public use of visual information much more convenient and economical. It will help securi ....Generic Content-based News Picture Retrieval with Local Invariant Features. Image Retrieval searches for images from large databases whose visual content meets the requirements submitted by users. Besides directly benefiting the Partner Organization, this project will enable more efficient access to large picture repositories in news agencies and publishers, digital libraries and film archives. It will make public use of visual information much more convenient and economical. It will help security officers to effortlessly and accurately find particular scenes from the images generated by a large closed-circuit TV networks. Also, the developed technology can be applied to tele-education and e-commerce. New algorithms developed in this project will benefit the Australian and world scientific communities.Read moreRead less