Breaking critical barriers in soil formation of bauxite residues . Conventional methods of bauxite residue rehabilitation require expensive and unsustainable covering topsoil. Building on recent breakthroughs in eco-engineering tailings into soil, the project aims to develop a field-based technology using marine microbes and halophytic plants to accelerate in-situ soil formation from bauxite residues (incl seawater neutralised bauxite residues) under field conditions. The technology will be unde ....Breaking critical barriers in soil formation of bauxite residues . Conventional methods of bauxite residue rehabilitation require expensive and unsustainable covering topsoil. Building on recent breakthroughs in eco-engineering tailings into soil, the project aims to develop a field-based technology using marine microbes and halophytic plants to accelerate in-situ soil formation from bauxite residues (incl seawater neutralised bauxite residues) under field conditions. The technology will be underpinned by understanding the roles of marine microbe consortia and eco-engineering inputs in accelerating key mineralogical, geochemical, physical and biological changes in bauxite residues. This technology is expected to be transferable and adaptable across other alumina refineries in Australia.Read moreRead less
Accelerated tailings remediation with plant and microbial biotechnologies. The Australian alumina industry produces 32 million tonnes of bauxite residue (alumina refining tailings) each year, most of which is stored in perpetuity in landfill-type tailings storage facilities. The high pH, high salinity, lack of plant nutrients, and poor physical properties of bauxite residue are major barriers to safe storage and successful closure of tailings storage facilities. Existing remediation approaches a ....Accelerated tailings remediation with plant and microbial biotechnologies. The Australian alumina industry produces 32 million tonnes of bauxite residue (alumina refining tailings) each year, most of which is stored in perpetuity in landfill-type tailings storage facilities. The high pH, high salinity, lack of plant nutrients, and poor physical properties of bauxite residue are major barriers to safe storage and successful closure of tailings storage facilities. Existing remediation approaches are expensive, slow, and often ineffective. We will deliver new microbial- and plant-driven biotechnologies for rapid, cost-effective remediation of bauxite residue. This will enable safe, sustainable closure of storage facilities, and safeguard the strong contribution of this $15 billion industry to Australia's economy. Read moreRead less
Biogeochemical remediation approaches for PFAS contaminated environments. This project aims to identify and harvest microorganisms capable of directly or indirectly affecting PFOS or PFOA degradation in the environment. Fluorinated compounds such as PFOS and PFOA in firefighting foams are contaminants of concern now routinely detected in contaminated groundwater and soil globally. Understanding the role of microorganisms, and the biogeochemical processes they perform in relation to fluorinated c ....Biogeochemical remediation approaches for PFAS contaminated environments. This project aims to identify and harvest microorganisms capable of directly or indirectly affecting PFOS or PFOA degradation in the environment. Fluorinated compounds such as PFOS and PFOA in firefighting foams are contaminants of concern now routinely detected in contaminated groundwater and soil globally. Understanding the role of microorganisms, and the biogeochemical processes they perform in relation to fluorinated compounds, will inform handling of contaminated sites and lead to development of cost effective and sustainable remediation technologies. Read moreRead less
The adaptive evolution of key methane-utilising microorganisms. This project aims to characterise the evolutionary adaptations of a group of microorganisms with a key role in mitigating the release of methane into the atmosphere. Innovative molecular and visualisation-based approaches will be applied to uncover their metabolic diversity and evolutionary history. An important outcome of this study will be the comprehensive understanding of the contribution and impact these microorganisms have on ....The adaptive evolution of key methane-utilising microorganisms. This project aims to characterise the evolutionary adaptations of a group of microorganisms with a key role in mitigating the release of methane into the atmosphere. Innovative molecular and visualisation-based approaches will be applied to uncover their metabolic diversity and evolutionary history. An important outcome of this study will be the comprehensive understanding of the contribution and impact these microorganisms have on the global carbon cycle, which will importantly inform accurate climate change models. This has clear benefits for society, given the precision of such models is essential in our ability to minimise the impact and associated cost of global warming.Read moreRead less
Uncovering new microbial players and processes in the global methane cycle. This project aims to utilise multiple analytical strategies (including metagenomics and metatranscriptomics) to substantially expand our understanding of the key microorganisms, metabolic strategies, and interspecies relationships involved in the formation and consumption of methane. The global methane cycle is controlled by microorganisms that produce and consume this important greenhouse gas, however it is now recognis ....Uncovering new microbial players and processes in the global methane cycle. This project aims to utilise multiple analytical strategies (including metagenomics and metatranscriptomics) to substantially expand our understanding of the key microorganisms, metabolic strategies, and interspecies relationships involved in the formation and consumption of methane. The global methane cycle is controlled by microorganisms that produce and consume this important greenhouse gas, however it is now recognised that there are many as-yet undiscovered methane-metabolising microorganisms in the environment. The project will lead to a greater understanding of the contribution of these novel microorganisms to global carbon cycling and their links to climate change. This will directly benefit modelling efforts to understand future climate change scenarios.Read moreRead less
Illuminating the microbial world using genome-based fluorescence microscopy. Our understanding of microbial diversity on Earth has been fundamentally changed by metagenomic characterisation of natural ecosystems. Traditional approaches for visualising microbial communities are time-consuming and provide limited information about the identity of specific microorganisms. The proposed research aims to combine single cell genomics and super resolution microscopy for novel, high-throughput, genome-b ....Illuminating the microbial world using genome-based fluorescence microscopy. Our understanding of microbial diversity on Earth has been fundamentally changed by metagenomic characterisation of natural ecosystems. Traditional approaches for visualising microbial communities are time-consuming and provide limited information about the identity of specific microorganisms. The proposed research aims to combine single cell genomics and super resolution microscopy for novel, high-throughput, genome-based techniques to visualise microorganisms, plasmids and viruses, with strain level specificity. The application of these highly scalable approaches will provide comprehensive and unprecedented insight into the fine-scale dynamics and evolution of environmentally and biotechnologically important microbial communities.Read moreRead less
Fine-scale resolution of genomes in natural microbial communities. This project aims to develop advanced molecular and statistical techniques to precisely resolve the genomes of microbes in the environment. Microbes inhabit every niche on the planet and are fundamental to human and animal health, agriculture, and the environment. The proposed technology will advance our understanding of environmental microbes, leading to advances in areas like climate science and biosecurity where microbes play ....Fine-scale resolution of genomes in natural microbial communities. This project aims to develop advanced molecular and statistical techniques to precisely resolve the genomes of microbes in the environment. Microbes inhabit every niche on the planet and are fundamental to human and animal health, agriculture, and the environment. The proposed technology will advance our understanding of environmental microbes, leading to advances in areas like climate science and biosecurity where microbes play a key role. It will also support the development of billion dollar industries focused on the use of beneficial microbes in agriculture, plant, animal, and human health.Read moreRead less
Changing the classification status quo with a global genome-based taxonomy. A grand challenge in biology is the reconstruction of the complete evolutionary history of life on our planet. A major hurdle to this goal has been the inability to culture most microbial species which comprise the bulk of evolutionary diversity. However, new molecular techniques have removed this hurdle and >1,000 new microbial species are being revealed each month through sequencing of environmental samples. This proje ....Changing the classification status quo with a global genome-based taxonomy. A grand challenge in biology is the reconstruction of the complete evolutionary history of life on our planet. A major hurdle to this goal has been the inability to culture most microbial species which comprise the bulk of evolutionary diversity. However, new molecular techniques have removed this hurdle and >1,000 new microbial species are being revealed each month through sequencing of environmental samples. This project aims to organise both cultured and uncultured microbial diversity into a systematic evolutionary framework to replace the current highly flawed and incomplete classification of microorganisms. The systematic classification of the microbial world is timely and will enable fundamental insights into ecology and evolution.Read moreRead less
Bio-recovery of rare earth elements from Australian soils and mine tailings. This project aims to discover how microbes dissolve weathering-resistant phosphate minerals that contain valuable rare earth elements used widely in modern technology. This discovery would create new knowledge in the interdisciplinary fields of biogeochemistry and biohydrometallurgy, using an innovative combination of techniques in metagenomics, microbiology and mineralogy. Expected research outcomes include new, more ....Bio-recovery of rare earth elements from Australian soils and mine tailings. This project aims to discover how microbes dissolve weathering-resistant phosphate minerals that contain valuable rare earth elements used widely in modern technology. This discovery would create new knowledge in the interdisciplinary fields of biogeochemistry and biohydrometallurgy, using an innovative combination of techniques in metagenomics, microbiology and mineralogy. Expected research outcomes include new, more economic and environmentally sustainable biotechnologies for recovering rare earth elements and increasing phosphorus availability in Australian mineral deposits and soils. These outcomes should benefit the mining and agricultural sectors, by decreasing Australia's dependency on overseas REE supply and the use of fertilizers.Read moreRead less
Formation and stabilisation of coastal blue carbon. Blue carbon is organic carbon stored within coastal vegetated ecosystems. This project will examine the composition, formation and dynamics of blue carbon in a range of coastal ecosystems. Combining advanced analytical chemistry with environmental microbiology, we will discover how blue carbon is stabilised and destabilised, a critical factor in nature-based climate change mitigation strategies. Further, we will gain a quantitative understandin ....Formation and stabilisation of coastal blue carbon. Blue carbon is organic carbon stored within coastal vegetated ecosystems. This project will examine the composition, formation and dynamics of blue carbon in a range of coastal ecosystems. Combining advanced analytical chemistry with environmental microbiology, we will discover how blue carbon is stabilised and destabilised, a critical factor in nature-based climate change mitigation strategies. Further, we will gain a quantitative understanding of blue carbon contributions to carbon cycling, providing enhanced modeling and prediction of climate-cycle feedbacks in response to biotic and environmental change. This research will significantly benefit Australia’s effective management of coastal vegetated ecosystems for maximum carbon offsets.Read moreRead less