Algal direct-air CO2 capture through interfacial enzyme immobilisation . Capturing CO2 directly from the atmosphere is challenging due to inherently slow mass transfer kinetics. This project aims to overcome this using an enzyme that can rapidly solubilise CO2 from air into water, to produce algae. By engineering the enzyme immobilisation at the air-water interface, this project will activate and protect the enzymes, increasing their lifespan and reducing costs. By understanding mass transfer an ....Algal direct-air CO2 capture through interfacial enzyme immobilisation . Capturing CO2 directly from the atmosphere is challenging due to inherently slow mass transfer kinetics. This project aims to overcome this using an enzyme that can rapidly solubilise CO2 from air into water, to produce algae. By engineering the enzyme immobilisation at the air-water interface, this project will activate and protect the enzymes, increasing their lifespan and reducing costs. By understanding mass transfer and enzyme activity in the interfacial immobilisation media, floating enzyme rafts can be developed for deployment over expansive areas, facilitating large-scale conversion of atmospheric CO2 into algae-derived fuels, feeds and chemicals.Read moreRead less
Assembly and function of arabinogalactan-proteins: a class of proteoglycans involved in plant growth and development. We aim to define the mechanisms by which a family of cell surface proteoglycans, the arabinogalactan-proteins (AGPs), are assembled and contribute to the regulation of plant growth and development using Arabidopsis, a model system amenable to a functional genomics strategy. This will be achieved through the application of bioinformatics for gene discovery and molecular, biochemi ....Assembly and function of arabinogalactan-proteins: a class of proteoglycans involved in plant growth and development. We aim to define the mechanisms by which a family of cell surface proteoglycans, the arabinogalactan-proteins (AGPs), are assembled and contribute to the regulation of plant growth and development using Arabidopsis, a model system amenable to a functional genomics strategy. This will be achieved through the application of bioinformatics for gene discovery and molecular, biochemical and genetics approaches to define gene function. Understanding mechanisms that control plant growth and development will ultimately impact on industries (agriculture, horticulture and forestry) vital to Australia's prosperity.Read moreRead less
Assembly and function of arabinogalactan-proteins: a class of proteoglycans involved in plant growth and development. Achievements of the Objectives will specifically address National Research Priority 3 by developing breakthrough science and utilising frontier technologies with application to Australia's agri-biotechnology industries. In addition to contributing to world class research outcomes, we will train highly skilled graduates and postdoctoral fellows in functional genomics technologies, ....Assembly and function of arabinogalactan-proteins: a class of proteoglycans involved in plant growth and development. Achievements of the Objectives will specifically address National Research Priority 3 by developing breakthrough science and utilising frontier technologies with application to Australia's agri-biotechnology industries. In addition to contributing to world class research outcomes, we will train highly skilled graduates and postdoctoral fellows in functional genomics technologies, thereby contributing to the "knowledge nation".Read moreRead less
Novel concepts for bioelectrochemical generation of renewable fuels and chemicals from wastewater. Global warming and the diminishing fossil fuel resources are posing an ever increasing threat to our societies and economies. This project aims to develop novel and highly innovative bioelectrochemical processes for the production of valuable fuels and chemicals from wastewater, which is a largely untapped renewable resource.
Eruption dynamics and tsunami potential from submarine volcanoes. This project is based on recently acquired seafloor samples and geophysical data from extraordinary deposits at a modern submarine volcano. This project aims to determine the conditions that lead to explosive eruption underwater, the dynamics of associated sediment flows, and if these events can trigger tsunami. Expected outcomes include an unprecedented reconstruction of the architecture of submarine caldera volcanoes, new innova ....Eruption dynamics and tsunami potential from submarine volcanoes. This project is based on recently acquired seafloor samples and geophysical data from extraordinary deposits at a modern submarine volcano. This project aims to determine the conditions that lead to explosive eruption underwater, the dynamics of associated sediment flows, and if these events can trigger tsunami. Expected outcomes include an unprecedented reconstruction of the architecture of submarine caldera volcanoes, new innovative models applicable globally for a richer understanding of volcanic tsunami and eruptions that shape the seafloor. This project will provide significant benefits through mitigation of global marine natural hazards, and by improving knowledge on the volcanic hosts of ore deposits.Read moreRead less
Dissecting the Indigo Pathway in Natural Indigo Producing Plants: Intricate Pathway Engineering for the Generation of Blue-Fibre Cotton. Australian cotton growers must maintain a sustained competitive advantage in the future to compete within the global cotton market by commanding higher margins for specialty cotton lint over and above current revenues. Development, via biotechnology, of naturally-colored, 'blue' lint cottons is the technical goal, where novel environmentally-benign textile prod ....Dissecting the Indigo Pathway in Natural Indigo Producing Plants: Intricate Pathway Engineering for the Generation of Blue-Fibre Cotton. Australian cotton growers must maintain a sustained competitive advantage in the future to compete within the global cotton market by commanding higher margins for specialty cotton lint over and above current revenues. Development, via biotechnology, of naturally-colored, 'blue' lint cottons is the technical goal, where novel environmentally-benign textile products could be produced without the use of toxic synthetic dyes or caustic dyeing processes. Success will provide a unique opportunity to re-establish an Australian cotton/textile industry by allowing direct participation in the development, branding and marketing of novel Australian textile products, generating potential revenue upwards of $10B/year. Read moreRead less
Design and engineering of proteins for biotechnology and biomedicine. The primary aim of this application is to enhance the thermodynamic and folding properties of proteins by redesign and engineering. The structures and folding behaviour of the redesigned proteins will be characterised using X-ray crystallography and biophysical techniques. The expected outcomes of this project are: engineering of new proteins that can be used in biotechnology, medical and pharmaceutical applications, or basic ....Design and engineering of proteins for biotechnology and biomedicine. The primary aim of this application is to enhance the thermodynamic and folding properties of proteins by redesign and engineering. The structures and folding behaviour of the redesigned proteins will be characterised using X-ray crystallography and biophysical techniques. The expected outcomes of this project are: engineering of new proteins that can be used in biotechnology, medical and pharmaceutical applications, or basic research; fundamental insights into protein design and engineering; and a wealth of knowledge on the factors that dictate protein stability and folding.Read moreRead less
Developing new tools for chemical biology. We will develop new synthetic strategies to support the development of small molecule chemical probes that bind with high affinity and specificity to a target protein. Such chemical probes are invaluable in elucidating the role of specific proteins in biological pathways. Our novel strategy aims to be rapid, efficient in its use of materials and widely applicable to a range of different protein targets. The core of our approach involves using biophysica ....Developing new tools for chemical biology. We will develop new synthetic strategies to support the development of small molecule chemical probes that bind with high affinity and specificity to a target protein. Such chemical probes are invaluable in elucidating the role of specific proteins in biological pathways. Our novel strategy aims to be rapid, efficient in its use of materials and widely applicable to a range of different protein targets. The core of our approach involves using biophysical binding assays to characterise compounds that are produced on small scale using parallel chemistry. This approach will enable better chemical probes to be developed more rapidly at lower cost than is currently possible.Read moreRead less
BioPPSy: An open source BIOchemical Property Prediction SYstem. Computer software will be developed for the prediction of the pharmacokinetic properties of small molecules to assist in the development of new compounds with drug-like properties. The software will be made freely available to promote its use and further development.
Interrogating diarylquinoline toxicity with targeted organic synthesis. Bedaquiline is the only new first-line treatment with a new mechanism of action to treat TB in the last 40 years, approved by the FDA on 31 December 2012. Alarmingly, this compound, has significant toxicities. The hypothesis tested in this project is that decreasing lipophilicity and basicity in this class of compounds while retaining target affinity will decrease toxicity but retain anti-TB activity. The project aims to: sy ....Interrogating diarylquinoline toxicity with targeted organic synthesis. Bedaquiline is the only new first-line treatment with a new mechanism of action to treat TB in the last 40 years, approved by the FDA on 31 December 2012. Alarmingly, this compound, has significant toxicities. The hypothesis tested in this project is that decreasing lipophilicity and basicity in this class of compounds while retaining target affinity will decrease toxicity but retain anti-TB activity. The project aims to: synthesise novel heteroarylalkylamines distinct from bedaquiline and designed to be more polar, less basic, and metabolically more stable; and, test all successfully synthesised target compounds for mechanism-based anti-tuberculosis activity, hERG-mediated cardiotoxicity, metabolic instability, and phospholipidosis.Read moreRead less