Automatic cartilage segmentation in magnetic resonance imaging. Osteoarthritis (OA) is the most common form of arthritis, affecting nearly 1.4 million Australians. This research aims at engineering new tools for use in Magnetic Resonance Imaging systems to enable automated analyses of the cartilage and bones in joint images. The goals of the work are to assist with improved diagnosis and treatment planning for both chronic disease, such as OA, and acute injuries, such as cartilage and ligament ....Automatic cartilage segmentation in magnetic resonance imaging. Osteoarthritis (OA) is the most common form of arthritis, affecting nearly 1.4 million Australians. This research aims at engineering new tools for use in Magnetic Resonance Imaging systems to enable automated analyses of the cartilage and bones in joint images. The goals of the work are to assist with improved diagnosis and treatment planning for both chronic disease, such as OA, and acute injuries, such as cartilage and ligament tears in sporting injuries and other traumas.
The software developed will be provided on the project’s partner (Siemens) platform and will therefore be available worldwide and have a consequently large impact on the field.
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A probabilistic framework for nonlinear dimensionality reduction algorithms. The Twin Measures Framework is a novel platform for analysing existing dimensionality reduction methods and the invention of new ones. This research will radically improve image analysis, with beneficial applications from pharmaceutical drug design through to border protection.
Pattern-Based Video Coding Techniques for Real-Time Low Bit-Rate and Low Complexity Encoding Applications. This project will benefit the National Research Priority on Frontier Technology with applications in video surveillance, smart home design, and patient monitoring. It will enable Australia to lead the world in setting up coding standards and thus impact directly on the manufacturing initiatives of the multimedia communication and entertainment industries. Telecommunication industries will b ....Pattern-Based Video Coding Techniques for Real-Time Low Bit-Rate and Low Complexity Encoding Applications. This project will benefit the National Research Priority on Frontier Technology with applications in video surveillance, smart home design, and patient monitoring. It will enable Australia to lead the world in setting up coding standards and thus impact directly on the manufacturing initiatives of the multimedia communication and entertainment industries. Telecommunication industries will be the immediate beneficiary by enabling quality live video transmissions at low bit rates in a cost-effective manner. This project will improve the ability of large organisations to operate virtually across huge distances in Australia with the aid of reliable multimedia communications using distributed devices of limited power and processing capacity.Read moreRead less
Synchrotrons, wavelet analysis and novel imaging techniques - applying physics tools to the war against breast cancer. Breast cancer leads to the second highest number of person-years of life lost due to cancer in Australia, with little known about its transport around the body. Current screening methods for breast cancer are neither 100% sensitive or specific and are heavily dependent upon expert training. This project will contribute by yielding valuable information on the transport of breast ....Synchrotrons, wavelet analysis and novel imaging techniques - applying physics tools to the war against breast cancer. Breast cancer leads to the second highest number of person-years of life lost due to cancer in Australia, with little known about its transport around the body. Current screening methods for breast cancer are neither 100% sensitive or specific and are heavily dependent upon expert training. This project will contribute by yielding valuable information on the transport of breast cancer and contribute to the development of an automated diagnostic method, with the possibility of its application to other diseases. The project will also involve members of the regional community, train regional scientists and provide synchrotron experience for Australian scientists in time for Australia's first synchrotron.Read moreRead less
Structural-functional connectivity in the brain. This project aims to develop magnetic resonance imaging analysis methods to non-invasively study brain connectivity. Recent advances in imaging can comprehensively describe the brain’s complex network of functional and structural connections (the brain ‘connectome’). This project will simultaneously investigate structural and functional connectivity, and characterise the dynamic properties of the connectome using graph-theoretic approaches. This p ....Structural-functional connectivity in the brain. This project aims to develop magnetic resonance imaging analysis methods to non-invasively study brain connectivity. Recent advances in imaging can comprehensively describe the brain’s complex network of functional and structural connections (the brain ‘connectome’). This project will simultaneously investigate structural and functional connectivity, and characterise the dynamic properties of the connectome using graph-theoretic approaches. This project should give neuroscientists computational tools to comprehensively map the network architecture of the human brain.Read moreRead less
Automatic Brain Tissue Segmentation in Magnetic Resonance Images based on Knowledge-guided Constrained Clustering. Accurate volumetric measurement of brain tissues is of critical importance in the study of many brain disorders, disease diagnosis, disease progression tracking and treatment monitoring. The study in this research will result in the development of a powerful computational technique that allows automatic volumetric measurement and analysis of brain tissues. The software developed in ....Automatic Brain Tissue Segmentation in Magnetic Resonance Images based on Knowledge-guided Constrained Clustering. Accurate volumetric measurement of brain tissues is of critical importance in the study of many brain disorders, disease diagnosis, disease progression tracking and treatment monitoring. The study in this research will result in the development of a powerful computational technique that allows automatic volumetric measurement and analysis of brain tissues. The software developed in this project will expedite early clinical diagnosis and treatment of neural diseases for patients, hence saving life and reducing health cost both at the personal and the national level. Read moreRead less
Investigation of three dimensional terahertz computed tomography for biomedical applications. Terahertz (T-ray) imaging is an exciting newly emerging technology that can perform safe, non-invasive, imaging and chemical sensing at the same time. This research aims to achieve an advance in terahertz imaging by using advanced methods that will enhance our ability to achieve accurate detection of diseased tissue in vivo. Socio-economic benefits to Australia include: (i) contributions to terahertz sy ....Investigation of three dimensional terahertz computed tomography for biomedical applications. Terahertz (T-ray) imaging is an exciting newly emerging technology that can perform safe, non-invasive, imaging and chemical sensing at the same time. This research aims to achieve an advance in terahertz imaging by using advanced methods that will enhance our ability to achieve accurate detection of diseased tissue in vivo. Socio-economic benefits to Australia include: (i) contributions to terahertz systems, enhancing Australia's reputation for cutting-edge research; (ii) international collaboration will be strengthened; (iii) results will potentially lead to commercialisation opportunities; (iv) the outcomes will ultimately impact on improving terahertz imaging in quality control, medical diagnosis, and detection for national security.Read moreRead less
In-vivo detection of airway injury and disease using phase contrast X-ray velocimetry. Currently diagnosis of lung disease, a major cause of death in humans, is based on clinical symptoms that do not usually manifest until the disease is well advanced. This project will develop a novel imaging technique, X-ray velocimetry, to detect changes in tissue before symptoms arise, potentially leading to strategies for managing lung diseases.
Discovery Early Career Researcher Award - Grant ID: DE150101655
Funder
Australian Research Council
Funding Amount
$297,036.00
Summary
Discriminative detection and quantification of cancer imaging biomarkers. This project aims to develop a new framework for the detection and quantification of cancer biomarkers in diagnostic and histopathology images with discriminative modelling of intrinsic structures. The framework will be the first computerised solution to provide automated, quantitative annotations of cancer imaging biomarkers at the macroscopic and microscopic levels to support standardised reporting of image interpretatio ....Discriminative detection and quantification of cancer imaging biomarkers. This project aims to develop a new framework for the detection and quantification of cancer biomarkers in diagnostic and histopathology images with discriminative modelling of intrinsic structures. The framework will be the first computerised solution to provide automated, quantitative annotations of cancer imaging biomarkers at the macroscopic and microscopic levels to support standardised reporting of image interpretation. It will help to alleviate the inter-observer variability and time-consuming process of manual analysis. The project aims to advance fundamental biomedical imaging research in generalised visual structure extraction and classification, and enable large-scale translational research in systems pathology for personalised cancer care.Read moreRead less
Automatic detection of the circle of Willis in neuro-images using multi-scale gradient calculation and knowledge-based genetic algorithms. Stroke is the third most common cause of death and a major contributor to long term disability in Australia. The most efficient way of preventing stroke from happening is to detect related symptoms early. The group of cerebral blood vessels that closely related to strokes is the circle of Willis (CoW). We build a system that can automatically detect and quan ....Automatic detection of the circle of Willis in neuro-images using multi-scale gradient calculation and knowledge-based genetic algorithms. Stroke is the third most common cause of death and a major contributor to long term disability in Australia. The most efficient way of preventing stroke from happening is to detect related symptoms early. The group of cerebral blood vessels that closely related to strokes is the circle of Willis (CoW). We build a system that can automatically detect and quantify CoW in neuroimages, providing ways of preventing strokes from happening. The project will enhance Australia¡¯s leading position in promoting and maintaining good health, especially in preventive healthcare.Read moreRead less