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Next generation high throughput lipidomics using adaptive modelling. This project aims to develop a unique high-throughput method to capture the lipidomic profile of human plasma suitable for large human population screening. Lipids are fundamental to every biological system, but our understanding of their regulation in humans have been largely superficial. By incorporating a new lipidomics approach, with genomic data, this project aims to expand our understanding of human biology by identifying ....Next generation high throughput lipidomics using adaptive modelling. This project aims to develop a unique high-throughput method to capture the lipidomic profile of human plasma suitable for large human population screening. Lipids are fundamental to every biological system, but our understanding of their regulation in humans have been largely superficial. By incorporating a new lipidomics approach, with genomic data, this project aims to expand our understanding of human biology by identifying regulators of lipid metabolism. The large diversity in humans necessitate sufficient sample sizes to identify true genetic regulators, but to date techniques capturing phenotypic data (lipids) have been largely limited. It is anticipated that this study will identify new regulators of lipid metabolism in humans.Read moreRead less
CRISPR-based pathway activation for bioactive molecule discovery in fungi. Fungi produce an incredible array of unique bioactive molecules, many of which have contributed greatly to humanity (e.g. the antibiotic penicillin, which has saved millions of lives since its discovery). DNA sequencing has revealed many fungi contain the genetic instructions to produce new molecules that have not been seen previously. However, these genes are “switched off" by default and cannot be accessed. This project ....CRISPR-based pathway activation for bioactive molecule discovery in fungi. Fungi produce an incredible array of unique bioactive molecules, many of which have contributed greatly to humanity (e.g. the antibiotic penicillin, which has saved millions of lives since its discovery). DNA sequencing has revealed many fungi contain the genetic instructions to produce new molecules that have not been seen previously. However, these genes are “switched off" by default and cannot be accessed. This project will develop innovative new methods to "hot-wire" these genes, allowing them to turn on and produce a treasure trove of new bioactive molecules. The outcomes of this project will transform our abilities to tap into the hidden potential of fungi to generate new lead molecules for the agricultural and medical industries.Read moreRead less
Is transport of miRNAs essential for plant development? This project will provide knowledge of how a new class of biologically active molecule (micro RNA) regulates expression of genes at sites in the plant that are critical for growth and development. MicroRNAs are believed to influence the size and shape of plants, how rapidly they grow and how well they produce and fill seeds. These molecules are part of a group of bioactive signals that move throughout the plant, functioning like hormones bu ....Is transport of miRNAs essential for plant development? This project will provide knowledge of how a new class of biologically active molecule (micro RNA) regulates expression of genes at sites in the plant that are critical for growth and development. MicroRNAs are believed to influence the size and shape of plants, how rapidly they grow and how well they produce and fill seeds. These molecules are part of a group of bioactive signals that move throughout the plant, functioning like hormones but directly influencing how well critical genes work. Their exploitation holds great promise for manipulating plant performance and enhancing crop yields. Read moreRead less
Exploiting natural variation to discover tools to increase crop plant yield. This project aims to identify the specific biochemical and underlying molecular modifications that contributed to the evolution of the C4 pathway by studying C3, C4 and C3-C4 intermediate Flaveria species. Most land plants use C3 or C4 photosynthesis to assimilate CO2. Plants using the C4 pathway evolved from C3 ancestors in multiple plant lineages, and show higher rates of photosynthesis and conversion of solar radiati ....Exploiting natural variation to discover tools to increase crop plant yield. This project aims to identify the specific biochemical and underlying molecular modifications that contributed to the evolution of the C4 pathway by studying C3, C4 and C3-C4 intermediate Flaveria species. Most land plants use C3 or C4 photosynthesis to assimilate CO2. Plants using the C4 pathway evolved from C3 ancestors in multiple plant lineages, and show higher rates of photosynthesis and conversion of solar radiation to biomass in arid, high-light and saline environments, which are expanding due to global climate change. The outcomes of this project could define what is required to engineer plant varieties with increased yield and the ability to withstand effects of climate shift, and contribute to our understanding of convergent evolutionary processes.Read moreRead less
Female roles during postcopulatory sexual selection. The project will evaluate the importance of postcopulatory sexual selection in the guppy, a polyandrous species of livebearing fish. The use of artificial insemination, which experimentally controls the relative contribution of sperm from competing males (as well as other confounding effects), will facilitate a powerful test of recent theoretical predictions in evolutionary biology. The project will enable me to distinguish between competing h ....Female roles during postcopulatory sexual selection. The project will evaluate the importance of postcopulatory sexual selection in the guppy, a polyandrous species of livebearing fish. The use of artificial insemination, which experimentally controls the relative contribution of sperm from competing males (as well as other confounding effects), will facilitate a powerful test of recent theoretical predictions in evolutionary biology. The project will enable me to distinguish between competing hypotheses for postcopulatory paternity bias following female multiple mating (sperm competition, cryptic female choice, genetic compatibility) and provide additional insights into the selective forces promoting the evolution of female promiscuity.Read moreRead less
Genome Approaches to Investigate Metabolic Coordination in Plant Cells. Metabolism of C and N in legume nodules requires interaction between the symbiotic bacteria and plant organelles, particularly metabolism in plastids and mitochondria. Fixed N is assimilated through the de novo synthesis of purines in both plastids and mitochondria. However, each of the nine pathway enzymes is encoded by a single gene, indicating each protein is targeted to both organelles. Purine metabolism will provide ....Genome Approaches to Investigate Metabolic Coordination in Plant Cells. Metabolism of C and N in legume nodules requires interaction between the symbiotic bacteria and plant organelles, particularly metabolism in plastids and mitochondria. Fixed N is assimilated through the de novo synthesis of purines in both plastids and mitochondria. However, each of the nine pathway enzymes is encoded by a single gene, indicating each protein is targeted to both organelles. Purine metabolism will provide a model to assess the more general occurrence of dual-targeted proteins in plants. The aim is to identify and eventually exploit the signalling mechanism(s) that mediate communication between plastids and mitochondria.Read moreRead less
Force from lipids: the role of the lipid bilayer in mechanosensory transduction. The proposed research will significantly contribute to a better understanding of the wide range of physiological processes underlying mechanosensory transduction in living cells. The direct benefit for Australian science consists of: (i) strengthening international links with leading overseas laboratories, and (ii) accessing the state-of-the-art expertise not available in Australia. The acquired knowledge will aid i ....Force from lipids: the role of the lipid bilayer in mechanosensory transduction. The proposed research will significantly contribute to a better understanding of the wide range of physiological processes underlying mechanosensory transduction in living cells. The direct benefit for Australian science consists of: (i) strengthening international links with leading overseas laboratories, and (ii) accessing the state-of-the-art expertise not available in Australia. The acquired knowledge will aid in developing and designing artificial tactile sensors inspired by their biological models studied in this project. Long-term, the project is expected to make an original contribution towards developing new technologies and novel medical applications, both of which promise to be of great national benefit.Read moreRead less
Synergising pedodiversity and biodiversity to secure soil functionality. This project aims to understand the coupling between soil physical, chemical and biological diversity at a range of scales and land uses across New South Wales and its relationship with soil functioning. Soil diversity with its coupled biodiversity is crucial for conservation of sustainable ecosystems. Soil diversity varies on a continuum from microbial habitats to elds, catchments and regions. This project will enhance ou ....Synergising pedodiversity and biodiversity to secure soil functionality. This project aims to understand the coupling between soil physical, chemical and biological diversity at a range of scales and land uses across New South Wales and its relationship with soil functioning. Soil diversity with its coupled biodiversity is crucial for conservation of sustainable ecosystems. Soil diversity varies on a continuum from microbial habitats to elds, catchments and regions. This project will enhance our ability to understand the drivers of soil change through time, critical for minimising loss of biodiversity, achieving food and soil security and inferring effects of climate change.Read moreRead less
Australian savannah landscapes: past, present and future. Australian savannahs are productive and culturally and biologically significant landscapes but are vulnerable to climate change. The project will determine savannah function (carbon and water balance) for the present and assess how sensitive they have been to past climate variability. The project will then address how they may respond to future climate change.
Turf Wars: fighting the new battle facing blue forests. This project aims to use ecological models and field experiments to uncover drivers and critical thresholds for turf expansion. Habitat loss is a leading threat to goods and services from the oceans. Globally, kelp forests are collapsing and being replaced by persistent unwanted algal ‘turfs’. Understanding of this habitat shift is rudimentary, and solutions to mitigate the impacts virtually non-existent. Through stress experiments and geno ....Turf Wars: fighting the new battle facing blue forests. This project aims to use ecological models and field experiments to uncover drivers and critical thresholds for turf expansion. Habitat loss is a leading threat to goods and services from the oceans. Globally, kelp forests are collapsing and being replaced by persistent unwanted algal ‘turfs’. Understanding of this habitat shift is rudimentary, and solutions to mitigate the impacts virtually non-existent. Through stress experiments and genomic analyses, this project aims to discover resilient kelps that promote forest persistence under stress. By expanding our understanding of critical habitat transitions, and exploring new solutions, this project aims to enhance our capacity to respond to the ongoing degradation of Australia’s Great Southern Reef.Read moreRead less