Who’s who in the plant gene world? As many more plant genomes are sequenced, the bottleneck is being able to interrogate and translate this data into applications for crop improvement. This project will develop and apply a population graph database, hosting genome data for the world’s major crops and their wild relatives, allowing the characterisation of gene diversity on an unparalleled scale. Analysis of this data will reveal the presence/absence and sequence diversity for classes of genes for ....Who’s who in the plant gene world? As many more plant genomes are sequenced, the bottleneck is being able to interrogate and translate this data into applications for crop improvement. This project will develop and apply a population graph database, hosting genome data for the world’s major crops and their wild relatives, allowing the characterisation of gene diversity on an unparalleled scale. Analysis of this data will reveal the presence/absence and sequence diversity for classes of genes for important agronomic traits including disease resistance, flowering time and legume nitrogen fixation which will enable plant breeders to identify and apply novel genes and allelic variants for use in breeding programmes, accelerating the production of improved crop varieties.Read moreRead less
Determining how the soluble dietary fibre beta-glucan is made in cereals. This Project aims to define the molecular mechanisms that control the processes involved in the biosynthesis and regulation of mixed linkage glucan, a major soluble dietary fibre in the cell walls of cereal grains. Plant cell walls determine the quality of most plant-based products used in modern human societies, yet the regulatory mechanisms responsible for their modulation are not well understood. Key distinguishing feat ....Determining how the soluble dietary fibre beta-glucan is made in cereals. This Project aims to define the molecular mechanisms that control the processes involved in the biosynthesis and regulation of mixed linkage glucan, a major soluble dietary fibre in the cell walls of cereal grains. Plant cell walls determine the quality of most plant-based products used in modern human societies, yet the regulatory mechanisms responsible for their modulation are not well understood. Key distinguishing features of the Project will be the international, integrative, and multidisciplinary approach towards addressing this major challenge in plant biology and the potential of the fundamental scientific discoveries to benefit end-users in the food, feed and beverage industries.Read moreRead less
Molecular basis of synergy between PIs and defensins against fungi. The plant defensin nicotinamide adenine dinucleotide dehydrogenase subunit 1 (NaD1) has potent antifungal activity against agricultural and human pathogens and has potential in the treatment of serious diseases that affect crop production and human health. NaD1 has been found to permeabilise membranes and allows entry of other molecules into the fungal cytoplasm. While screening for molecules that enhance the activity of defensi ....Molecular basis of synergy between PIs and defensins against fungi. The plant defensin nicotinamide adenine dinucleotide dehydrogenase subunit 1 (NaD1) has potent antifungal activity against agricultural and human pathogens and has potential in the treatment of serious diseases that affect crop production and human health. NaD1 has been found to permeabilise membranes and allows entry of other molecules into the fungal cytoplasm. While screening for molecules that enhance the activity of defensins a number of proteinase inhibitors were identified that act synergistically with NaD1. This project aims to identify the molecular basis of this synergy which is expected to lead to better control of fungal diseases of crops and in humans.Read moreRead less
Functional characterisation of the necrotrophic effector proteins Tox1 and Tox3 from the wheat pathogen Stagonospora nodorum. Fungal pathogens cost the Australian agricultural industry over one billion dollars per year. This project will build upon recent key advances to provide a fundamental basis on how fungal pathogens cause disease. The results from this study will promote future advances in disease management with the aim of securing Australian wheat supplies.
Isolation and functional characterisation of a pathogen meta effector able to inhibit detection of multiple disease effectors by resistant plants. The rust fungi are a major economic threat to crop production in Australia. This project will investigate the molecular mechanism used by a rust fungus to prevent detection of multiple disease-inducing proteins by resistant plants and generate knowledge that will lead to the development of new and more effective disease control strategies.
Characterisation of PQ loop proteins in plants: are they voltage insensitive nonselective cation channels? Millions of hectares of Australian agricultural land are affected by salinity. This results in the loss of hundreds of millions of dollars in revenue each year. The identification of the pathway for the initial influx of Na+ into plants from the soil will be important in helping to develop crop plants that are salt tolerant. This will increase our understanding of the mechanisms of salinity ....Characterisation of PQ loop proteins in plants: are they voltage insensitive nonselective cation channels? Millions of hectares of Australian agricultural land are affected by salinity. This results in the loss of hundreds of millions of dollars in revenue each year. The identification of the pathway for the initial influx of Na+ into plants from the soil will be important in helping to develop crop plants that are salt tolerant. This will increase our understanding of the mechanisms of salinity tolerance, an area of great importance to Australian agriculture and environmental sustainability. The future applications of this work will increase agricultural productivity and enhance the quality of life for both Australians and the international community.Read moreRead less
Diversity in large crop genomes via enhanced recombination. The project aims to understand genetic and environmental factors that limit how fast genomic combinations can be generated by modifying the recombination rates between chromosomes. Plant breeding is based around genetic diversity, but modern breeding programs have captured only a small proportion of the variation available in wild relatives and land races. Knowledge of diversity in this wild germplasm pool is increasing and the challeng ....Diversity in large crop genomes via enhanced recombination. The project aims to understand genetic and environmental factors that limit how fast genomic combinations can be generated by modifying the recombination rates between chromosomes. Plant breeding is based around genetic diversity, but modern breeding programs have captured only a small proportion of the variation available in wild relatives and land races. Knowledge of diversity in this wild germplasm pool is increasing and the challenge is to quickly and efficiently introduce this variation into elite lines. This project’s findings are expected to transform wheat and barley breeding methods by unlocking the genetic diversity to produce new varieties. This will enhance and protect a critical and valuable rural industry.Read moreRead less
Finding the missing links in salt and water transport in plants. Grain crops and horticultural plants use proteins called aquaporins to move water across cell membranes, but a group of these proteins can also transport some important nutrient ions as well as toxic sodium ions. This project aims to reveal the molecular pathways that regulate water and ion transport via aquaporins using advanced techniques in biophysics and molecular biology. These results will provide novel insights into how plan ....Finding the missing links in salt and water transport in plants. Grain crops and horticultural plants use proteins called aquaporins to move water across cell membranes, but a group of these proteins can also transport some important nutrient ions as well as toxic sodium ions. This project aims to reveal the molecular pathways that regulate water and ion transport via aquaporins using advanced techniques in biophysics and molecular biology. These results will provide novel insights into how plants coordinate and adapt to changing water and salt conditions, addressing a missing link in how ions and water move in and out of plant vacuoles. Benefits include an expanded, innovative range of targets for plant breeding programs to improve plant productivity in our changing climate.Read moreRead less
Protein trafficking pathways in fungal rust pathogens of plants. This project aims to investigate protein trafficking pathways in fungal rusts of plants. These are devastating diseases that cause major losses in agricultural crops including wheat. Little is known of how these fungi form long and intimate relationships with plants to extract their nutrients. Using both model and agriculturally important fungi, the project will try to identify proteins that are transferred within the fungus and to ....Protein trafficking pathways in fungal rust pathogens of plants. This project aims to investigate protein trafficking pathways in fungal rusts of plants. These are devastating diseases that cause major losses in agricultural crops including wheat. Little is known of how these fungi form long and intimate relationships with plants to extract their nutrients. Using both model and agriculturally important fungi, the project will try to identify proteins that are transferred within the fungus and to the plant host to modify the infection. It will also identify fungal proteins needed to deliver trafficked proteins to plants. These discoveries ultimately may be translated into control strategies for these costly diseases.Read moreRead less
Commensal benefits: genomic basis for suppressing plant pathogens with Pseudomonas biocontrol species. Food security is an issue of mounting significance due to unpredictable climate trends and increasing global population growth. A feature of paramount importance to reliable crop production is the capacity to control plant diseases. This project investigates natural plant colonising bacteria as a tool for protecting plants from disease.