Flipping the mattress: infinite polyurethane recycling by synthetic biology. Australia is covered in billions of tonnes of plastic and yet <10% is recycled today. Polyurethane (PU) is ubiquitous in our everyday lives, from lacquer coatings to elastane clothing to durable foam padding in car seats, cushions and mattresses. Currently, there are few avenues for PU recycling and much ends up in landfill e.g., a single mattress produces 15-20kg of PU foam waste. Luckily, biodegradation of PU can occu ....Flipping the mattress: infinite polyurethane recycling by synthetic biology. Australia is covered in billions of tonnes of plastic and yet <10% is recycled today. Polyurethane (PU) is ubiquitous in our everyday lives, from lacquer coatings to elastane clothing to durable foam padding in car seats, cushions and mattresses. Currently, there are few avenues for PU recycling and much ends up in landfill e.g., a single mattress produces 15-20kg of PU foam waste. Luckily, biodegradation of PU can occur naturally via various microbial means and from insects, like Galleria mellonella larvae. The overall aim of this research project is to understand plastic biodegradation and translate nature’s solutions into flexible and efficient synthetic enzyme technologies that can sustainably recycle commonly used PU foams. Read moreRead less
Evolution of halophytes: a phyloinformatic approach to understanding and exploiting the traits underlying salt-tolerance in plants. Salinity is an increasing burden on the Australian economy & environment, with >2 million ha of salt-affected land, at an annual cost to agriculture over $187 million. One solution is to exploit naturally salt-tolerant plants to increase productive agricultural land and restore salt-affected environments. To do this, we must increase basic knowledge of the diversity ....Evolution of halophytes: a phyloinformatic approach to understanding and exploiting the traits underlying salt-tolerance in plants. Salinity is an increasing burden on the Australian economy & environment, with >2 million ha of salt-affected land, at an annual cost to agriculture over $187 million. One solution is to exploit naturally salt-tolerant plants to increase productive agricultural land and restore salt-affected environments. To do this, we must increase basic knowledge of the diversity & distribution of salt-tolerance. This project is the first to use DNA sequences from thousands of species to understand the evolution of salt-tolerance in order to provide the foundation for the development of new crop varieties, selection of species that can be developed for bioremediation, and identification of traits that will be profitable targets for breeding programs. Read moreRead less
Conservation genomics of a critically endangered insect. This project aims to develop tools genotyping large animal genomes, focusing on the case of the Lord Howe Island stick insect, once thought to be extinct and now critically endangered. This project expects to generate molecular tools to monitor the genetic health the insect which has a large, complex and poorly understood genome. Expected outcomes include the development of a preservation and reintroduction strategy for the insect. This pr ....Conservation genomics of a critically endangered insect. This project aims to develop tools genotyping large animal genomes, focusing on the case of the Lord Howe Island stick insect, once thought to be extinct and now critically endangered. This project expects to generate molecular tools to monitor the genetic health the insect which has a large, complex and poorly understood genome. Expected outcomes include the development of a preservation and reintroduction strategy for the insect. This project will benefit ongoing conservation efforts, and is timely given the ongoing eradication of rats from Lord Howe Island where this species once lived. Read moreRead less
Non-CO2 greenhouse gas emissions in afforested ecosystems in southeastern Australia - fluxes, processes and regional budget. There are no data available about the extent of emissions of the non-CO2 greenhouse gases nitrous oxide and methane from soils of forest ecosystems in Australia and the current methodolgy to quantify these emissions contains high uncertainties. Using the latest technology available we propose to i) measure emission rates of afforested ecosystems for non-CO2 greenhouse gase ....Non-CO2 greenhouse gas emissions in afforested ecosystems in southeastern Australia - fluxes, processes and regional budget. There are no data available about the extent of emissions of the non-CO2 greenhouse gases nitrous oxide and methane from soils of forest ecosystems in Australia and the current methodolgy to quantify these emissions contains high uncertainties. Using the latest technology available we propose to i) measure emission rates of afforested ecosystems for non-CO2 greenhouse gases in relation to previous land-use in southeastern Australia, ii) identify the processes controlling the emissions, iii) use the obtained data to calibrate a biogeochemical model, and iv) use the model to estimate regional inventories for non-CO2 greenhouse gas emissions in southeastern Australia.Read moreRead less
Crop improvement using peptide regulators of growth and N demand signalling. This project aims to reduce reliance on nitrogen fertilisers without reducing crop yield. Global food security relies on using high-yielding grain varieties and nitrogen-based fertilisers. Since 1950, fertiliser use has increased 20-fold but the yield benefits of this use are declining. Crops only absorb 30–50 per cent of the applied fertiliser and the unused nitrogen causes environmental damage which is costly to mitig ....Crop improvement using peptide regulators of growth and N demand signalling. This project aims to reduce reliance on nitrogen fertilisers without reducing crop yield. Global food security relies on using high-yielding grain varieties and nitrogen-based fertilisers. Since 1950, fertiliser use has increased 20-fold but the yield benefits of this use are declining. Crops only absorb 30–50 per cent of the applied fertiliser and the unused nitrogen causes environmental damage which is costly to mitigate. The novel technology platform of the project aims to develop new crops with more expansive root systems that use applied nitrogen fertiliser more efficiently and new legume varieties that symbiotically fix more nitrogen in an ecologically-sustainable way.Read moreRead less
Integrative assessment of disturbance and land-use change on total greenhouse gas balance and nutrient cycling in savanna ecosystems. Climate change and variability is expected to have an impact on the NT environment and economy. This project will enable NT specific calibrations of climate variability-land use models, such as the National Carbon Accounting System. The NT Government will have access to a high quality database and calibrated models relating to greenhouse gas emissions as a functio ....Integrative assessment of disturbance and land-use change on total greenhouse gas balance and nutrient cycling in savanna ecosystems. Climate change and variability is expected to have an impact on the NT environment and economy. This project will enable NT specific calibrations of climate variability-land use models, such as the National Carbon Accounting System. The NT Government will have access to a high quality database and calibrated models relating to greenhouse gas emissions as a function of land use change. The project will improve estimates and management of GHG and provide a basis for the NT to potentially exploit future carbon-trading initiatives or GHG abatement schemes as fundamental data describing emissions as a function of land use will be available. This is of national significance given the size of the savanna biome in Australia.Read moreRead less
Testing climatic, physiological and hydrological assumptions underpinning water yield from montane forests. Water collected in dams and reservoirs remains the mainstay water resource for Australian cities, towns and industry. Overwhelmingly, that water is collected from forested catchments where the water balance of forest stands is dominated by the amount of water used by trees. Characterising tree water use, its response to changing climatic and nocturnal conditions, and other aspects of sta ....Testing climatic, physiological and hydrological assumptions underpinning water yield from montane forests. Water collected in dams and reservoirs remains the mainstay water resource for Australian cities, towns and industry. Overwhelmingly, that water is collected from forested catchments where the water balance of forest stands is dominated by the amount of water used by trees. Characterising tree water use, its response to changing climatic and nocturnal conditions, and other aspects of stand hydrology, are crucial to our ability to predict and model future water yields. Working in the Cotter catchment near Canberra and the upper Kiewa catchment in north-east Victoria, we aim to help the agencies responsible for water and catchment management to improve the security of their forecasts of water yield and their on-ground management. Read moreRead less
Using defined biotic and abiotic stimuli to dissect patterns of gene expression and protein accumulation that specify root architecture. Root morphogenesis is fundamental to agriculture and valuable for investigating the informational networks of genes, proteins and metabolites that control root growth and plant development. Root systems vary widely both within and between species. Root morphology is directed by a basic genetic program that is influenced by environmental factors to provide an e ....Using defined biotic and abiotic stimuli to dissect patterns of gene expression and protein accumulation that specify root architecture. Root morphogenesis is fundamental to agriculture and valuable for investigating the informational networks of genes, proteins and metabolites that control root growth and plant development. Root systems vary widely both within and between species. Root morphology is directed by a basic genetic program that is influenced by environmental factors to provide an enormous "phenotypic plasticity". This project will use two model plant systems to investigate how different external signals are "translated" by the plant into different developmental regimes. This knowledge is crucial to understanding how the plasticity of root development is modulated in response to changing environmental factors.Read moreRead less
Why is the photosynthetic CO2-fixing enzyme, Rubisco, so inefficient? Dissection of the catalytic chemistry by computational simulation and experimental testing. Fixation of CO2 by the enzyme Rubisco during photosynthesis produces organic compounds which feed all life. Despite this critical role, Rubisco catalyses its reaction sluggishly and, worse, discriminates poorly between CO2 and O2, leading to useless products. Our combined expertise equips us to analyse Rubisco's mechanism using quantum- ....Why is the photosynthetic CO2-fixing enzyme, Rubisco, so inefficient? Dissection of the catalytic chemistry by computational simulation and experimental testing. Fixation of CO2 by the enzyme Rubisco during photosynthesis produces organic compounds which feed all life. Despite this critical role, Rubisco catalyses its reaction sluggishly and, worse, discriminates poorly between CO2 and O2, leading to useless products. Our combined expertise equips us to analyse Rubisco's mechanism using quantum-chemical methods and then test predictions experimentally. We will capitalise on our previous successful studies of Rubisco by addressing emergent issues which are the keys to understanding catalytic efficiency and CO2/O2 selectivity: the roles of a carbamylated lysine; the way CO2 addition is rendered irreversible; and the spin inversion inherent in O2 addition.Read moreRead less
Proteome mapping of the model fungal plant pathogen Stagonospora nodorum using LC-LC-MS/MS. Stagonospora nodorum is a fungus that causes leaf and glume blotch disease on wheat. This disease alone causes $55 million dollars in yield losses per annum in Australia. This project aims to identify the proteins produced by Stagonospora nodorum through the development of a new proteomics technique. Two clear benefits to the community resulting from this project will emerge. The first will be the expert ....Proteome mapping of the model fungal plant pathogen Stagonospora nodorum using LC-LC-MS/MS. Stagonospora nodorum is a fungus that causes leaf and glume blotch disease on wheat. This disease alone causes $55 million dollars in yield losses per annum in Australia. This project aims to identify the proteins produced by Stagonospora nodorum through the development of a new proteomics technique. Two clear benefits to the community resulting from this project will emerge. The first will be the expert training of a student in proteomics, a skill that is keenly sought. Secondly, the identification of these pathogen proteins will lead to new strategies to better control the disease and secure the supply of wheat.Read moreRead less