Using genetic Allee effects to manage invasive populations. An invasion can be started with only a small number of individuals, and it is very difficult to reliably detect these individuals. This project aims to develop new genetic technology that can send small founder populations extinct without affecting large populations. This technology removes the problem of having to detect small populations; these small populations will go extinct on their own, without the need for management interventio ....Using genetic Allee effects to manage invasive populations. An invasion can be started with only a small number of individuals, and it is very difficult to reliably detect these individuals. This project aims to develop new genetic technology that can send small founder populations extinct without affecting large populations. This technology removes the problem of having to detect small populations; these small populations will go extinct on their own, without the need for management intervention. This technology could be used to prevent establishment and spread of invasive species and agricultural pests. Through a combination of experimentation and modelling, the project develops this technology and assesses its use in applied problems ranging across environment, agriculture, and health.Read moreRead less
Mastering pyrimidine editing in RNA. Many plants and animals can alter their genetic information via RNA (ribonucleic acid) editing, a process that is often essential for the growth and development of the organism. This ability provides accurate control over gene expression and has great potential as a biotechnological tool in agriculture and medicine. RNA editing could be used to switch genes on or off in biotechnological production systems with an unprecedented degree of precision, or to corre ....Mastering pyrimidine editing in RNA. Many plants and animals can alter their genetic information via RNA (ribonucleic acid) editing, a process that is often essential for the growth and development of the organism. This ability provides accurate control over gene expression and has great potential as a biotechnological tool in agriculture and medicine. RNA editing could be used to switch genes on or off in biotechnological production systems with an unprecedented degree of precision, or to correct genetic diseases. This project aims to understand two RNA editing pathways in plants, one of which is found nowhere else and likely to involve a novel enzymatic mechanism. We will use the understanding gained to develop novel RNA processing tools usable in any living organism.Read moreRead less
Engineering self-assembled intracellular biological condensates. Cells depend on proteins linking together to build cellular structure, but how weak interactions build stable structure is a mystery. New evidence suggests proteins come together and then change state, employing liquid-like behaviour that builds vital nanoscale structure, such as nuclear bodies called paraspeckles. This project will unlock the secrets of this mysterious behavior of proteins, using paraspeckles as a model. We will u ....Engineering self-assembled intracellular biological condensates. Cells depend on proteins linking together to build cellular structure, but how weak interactions build stable structure is a mystery. New evidence suggests proteins come together and then change state, employing liquid-like behaviour that builds vital nanoscale structure, such as nuclear bodies called paraspeckles. This project will unlock the secrets of this mysterious behavior of proteins, using paraspeckles as a model. We will use this information for nanotechnology application to build a synthetic paraspeckle inspired structure with bespoke function. Benefits will include new concepts in how vital cell structure is assembled and disassembled, and nanotechnology and synthetic biology tools to manipulate cellular processes.Read moreRead less
IDENTIFYING CONTROL ELEMENTS IN CHLOROPLAST GENE EXPRESSION. Energy from sunlight is captured by photosynthesis in plants, providing the basis for the terrestrial food chain. This process takes place in chloroplasts, subcellular structures that derived from photosynthetic bacteria a billion years ago. Chloroplasts have their own DNA, containing genes encoding the most important photosynthetic proteins. This project aims to provide the world’s best resources for the study of chloroplast genes. In ....IDENTIFYING CONTROL ELEMENTS IN CHLOROPLAST GENE EXPRESSION. Energy from sunlight is captured by photosynthesis in plants, providing the basis for the terrestrial food chain. This process takes place in chloroplasts, subcellular structures that derived from photosynthetic bacteria a billion years ago. Chloroplasts have their own DNA, containing genes encoding the most important photosynthetic proteins. This project aims to provide the world’s best resources for the study of chloroplast genes. In the process, we will discover how these important genes are regulated to provide photosynthetic proteins in the right amounts, in the right cells, at the right time. The knowledge and resources gained will facilitate improvement of photosynthetic function in future agricultural crops.Read moreRead less
Unlocking secrets of fertility restoration for hybrid breeding in crops. Hybrid varieties give higher and more stable yields than conventional lines, but a cost-effective system to make hybrid seed on a commercial scale is still missing for economically important crops like wheat or barley. By elucidating the mode of action of a new type of restorer gene plus exploiting ancient or exotic wheat and barley collections this project will reveal aspects of largely understudied mechanisms underlying f ....Unlocking secrets of fertility restoration for hybrid breeding in crops. Hybrid varieties give higher and more stable yields than conventional lines, but a cost-effective system to make hybrid seed on a commercial scale is still missing for economically important crops like wheat or barley. By elucidating the mode of action of a new type of restorer gene plus exploiting ancient or exotic wheat and barley collections this project will reveal aspects of largely understudied mechanisms underlying fertility restoration in wheat and barley. The expected outcomes of the proposed research have the potential to deliver new tools for hybrid seed production programs in wheat and barley. Higher and more stable yields from hybrids will ensure food security in the face of an uncertain climate and growing human population.Read moreRead less
Adaptation to life in the dark: genomic analyses of blind beetles. This project aims to utilise a unique Australian model system based on multiple, independently-evolved subterranean water beetles to explore the adaptive and regressive changes in the genome that occur when surface species colonise subterranean habitats. This project focuses on the evolution of Heat Shock protein (Hsp) genes that play critical roles in adaptation to environmental stress and the process of de-canalisation, the rel ....Adaptation to life in the dark: genomic analyses of blind beetles. This project aims to utilise a unique Australian model system based on multiple, independently-evolved subterranean water beetles to explore the adaptive and regressive changes in the genome that occur when surface species colonise subterranean habitats. This project focuses on the evolution of Heat Shock protein (Hsp) genes that play critical roles in adaptation to environmental stress and the process of de-canalisation, the release of cryptic genetic variation that can allow novel morphologies to evolve in new environments. The project expects to provide further understanding of how species may potentially adapt to environmental stresses in the future, including climate change.Read moreRead less
Mid-Career Industry Fellowships - Grant ID: IM230100042
Funder
Australian Research Council
Funding Amount
$980,358.00
Summary
Unlocking the full reproductive potential for hybrid wheat breeding. Globally, wheat is cultivated as an inbred self-fertile crop with yield gains stagnating over the last decades. This contrasts with unabated yield gains and yield stability achieved for rice and corn through hybrid breeding and cross-pollination. Wheat hybrids hold potential for a 10-22% yield boost, but commercial deployment is restricted due to high seed production costs, a result of wheat’s floral architecture and poor outcr ....Unlocking the full reproductive potential for hybrid wheat breeding. Globally, wheat is cultivated as an inbred self-fertile crop with yield gains stagnating over the last decades. This contrasts with unabated yield gains and yield stability achieved for rice and corn through hybrid breeding and cross-pollination. Wheat hybrids hold potential for a 10-22% yield boost, but commercial deployment is restricted due to high seed production costs, a result of wheat’s floral architecture and poor outcrossing characteristics. This project aims to reduce costs by improving wheat’s female receptivity to airborne pollen, a major bottleneck to commercial realization of hybrids globally. Higher and more stable yields from wheat hybrids will ensure food security in the face of climate uncertainty and growing population.Read moreRead less
Establishing Vibrio natriegens as Ultra-Rapid Host for Synthetic Biology. This project aims to harness Vibrio natriegens, the world’s fastest-growing bacterium, as a microbial cell factory for synthetic biology and biotechnology. The project expects to develop new genetic tools and genetically-engineered microbes that can rapidly transform cheap feedstocks, such as plastic waste, into valuable chemicals and bioplastics. Expected outcomes include new knowledge on the mechanisms driving V. natrieg ....Establishing Vibrio natriegens as Ultra-Rapid Host for Synthetic Biology. This project aims to harness Vibrio natriegens, the world’s fastest-growing bacterium, as a microbial cell factory for synthetic biology and biotechnology. The project expects to develop new genetic tools and genetically-engineered microbes that can rapidly transform cheap feedstocks, such as plastic waste, into valuable chemicals and bioplastics. Expected outcomes include new knowledge on the mechanisms driving V. natriegens’ rapid growth, as well as building Australian multidisciplinary research capacity in synthetic biology that can translate this potential into bio-manufacturing processes. Significant benefits include the means to cut plastic pollution in our environment and to provide the basis for a carbon-negative chemical industry.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE240101210
Funder
Australian Research Council
Funding Amount
$375,837.00
Summary
A liquid protein platform for dynamic bio-inspired reaction compartments. This project aims to investigate liquid protein as a novel material for biotechnology by producing protein droplets with a range of material and structural properties and assess the activity of internalised enzymes. The project will combine concepts from protein-based subcellular super-structure and enzyme protein structure and apply cutting-edge biochemistry methods to study how catalysis can be controlled and directed th ....A liquid protein platform for dynamic bio-inspired reaction compartments. This project aims to investigate liquid protein as a novel material for biotechnology by producing protein droplets with a range of material and structural properties and assess the activity of internalised enzymes. The project will combine concepts from protein-based subcellular super-structure and enzyme protein structure and apply cutting-edge biochemistry methods to study how catalysis can be controlled and directed through liquid protein design. Expected outcomes include a new platform for using protein droplets to engineer dynamic catalytic compartments, strong international and interdisciplinary collaborations, and a knowledge-base for building synthetic biology tools and technologies for future green chemistry-based industries.Read moreRead less