Functionally characterizing mammalian microRNAs and mRNA interactions controlling cell division. This project addresses some of the most burning issues in molecular biology and genetic research, and the results will be widely applicable to a broad range of fields, including biotechnology, animal breeding, agricultural production, genetic engineering, medical science, and computational biology. By understanding the regulatory potential of microRNA molecules, we will understand more about species ....Functionally characterizing mammalian microRNAs and mRNA interactions controlling cell division. This project addresses some of the most burning issues in molecular biology and genetic research, and the results will be widely applicable to a broad range of fields, including biotechnology, animal breeding, agricultural production, genetic engineering, medical science, and computational biology. By understanding the regulatory potential of microRNA molecules, we will understand more about species diversity, regulatory networks, and plant and animal development. The early adoption of multi-gigabase next-generation sequencing technology in Australia provides rare and exciting opportunity to lead the world in genome-scale research, and to ensure that Australia has the necessary skill base to remain internationally competitive in this field.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0775726
Funder
Australian Research Council
Funding Amount
$306,270.00
Summary
Australian Mirror of the UCSC Genome Database and Browser. Modern medical, biological, agricultural, and environmental research and industries are being transformed by access to genomic information that details the DNA sequence of various species, as well as of different strains and individuals within populations. This information is being generated at an exponentially increasing speed, and requires large computational resources. This facility will provide Australian researchers, R&D organizati ....Australian Mirror of the UCSC Genome Database and Browser. Modern medical, biological, agricultural, and environmental research and industries are being transformed by access to genomic information that details the DNA sequence of various species, as well as of different strains and individuals within populations. This information is being generated at an exponentially increasing speed, and requires large computational resources. This facility will provide Australian researchers, R&D organizations and industry with state-of-the-art genomic data storage and analysis capability, which will permit both public and proprietary access, and accelerate Australian research and development in genetic medicine, pharmaceuticals, animal breeding and biodiversity.Read moreRead less
Intron encoded RNA regulatory networks in yeast. This project has the capacity to transform our understanding of the evolution, development and genetic variation of complex organisms, as well as the self-organization of complex systems in general. The national and community benefits of the project will be to maintain Australian leadership in advanced genetics and genome-phenome informatics. It will provide a platform for many applications in biology and biotechnology, including new genetic diagn ....Intron encoded RNA regulatory networks in yeast. This project has the capacity to transform our understanding of the evolution, development and genetic variation of complex organisms, as well as the self-organization of complex systems in general. The national and community benefits of the project will be to maintain Australian leadership in advanced genetics and genome-phenome informatics. It will provide a platform for many applications in biology and biotechnology, including new genetic diagnostics and an informed basis for the engineering of complex traits in agriculture. The project will also provide insights into the structure of biological communication and control systems with applications in information science and the programming of integrated complex systems in other domains.Read moreRead less
Genetic variation without sex: frequency-dependent selection and the maintenance of variation in asexual organisms. The proposed research will gain insight into one of the most fundamental yet puzzling questions in evolutionary biology and determine the generality of frequency-dependent selection as a mechanism for maintaining variation in asexual organisms. The results will have broad appeal, both internationally and nationally, and will also provide insight into why most species reproduce sexu ....Genetic variation without sex: frequency-dependent selection and the maintenance of variation in asexual organisms. The proposed research will gain insight into one of the most fundamental yet puzzling questions in evolutionary biology and determine the generality of frequency-dependent selection as a mechanism for maintaining variation in asexual organisms. The results will have broad appeal, both internationally and nationally, and will also provide insight into why most species reproduce sexually. The results will also help in the development of two asexual species as environmental indicators by linking clones with specific environmental changes. These indicator clones could then be adopted by natural resource managers to monitor environmental pollution and contamination.Read moreRead less
Genetic variation of transcriptional control. Genetic variation is a key cause phenotype differences in humans, animals, and plants and so of great economic importance. Despite its proven importance to human diseases, ?quantitative? variation in the amount of gene expression rather than ?qualitative? protein sequence changes, has not been systematically studied. We have developed a powerful method to identify genetic causes of quantitative variation using crosses of inbred mice in conjunction wi ....Genetic variation of transcriptional control. Genetic variation is a key cause phenotype differences in humans, animals, and plants and so of great economic importance. Despite its proven importance to human diseases, ?quantitative? variation in the amount of gene expression rather than ?qualitative? protein sequence changes, has not been systematically studied. We have developed a powerful method to identify genetic causes of quantitative variation using crosses of inbred mice in conjunction with microarray techniques to analyse expression of thousands of genes simultaneously. These studies will be extended to humans and be significant to wide areas of biological and commercial activity.Read moreRead less
Defining the impact of Environmental Endocrine Disruptors on the sustainability of
Australia’s Native Marsupials. Environmental endocrine disrupting chemicals (EEDs) from introduced plants, pesticides and wastewater are dramatically increasing in the Australian environment. EEDs have been shown to cause dramatic reproductive and developmental abnormalities in vertebrates ranging from fish to humans. This project plans to investigate the impact that these chemicals might have on marsupial devel ....Defining the impact of Environmental Endocrine Disruptors on the sustainability of
Australia’s Native Marsupials. Environmental endocrine disrupting chemicals (EEDs) from introduced plants, pesticides and wastewater are dramatically increasing in the Australian environment. EEDs have been shown to cause dramatic reproductive and developmental abnormalities in vertebrates ranging from fish to humans. This project plans to investigate the impact that these chemicals might have on marsupial development. Marsupials have a unique reproductive strategy and how this might affect their ability to respond to EEDs is unknown. This project aims to define the effects of three of the predominant EED risks for marsupials in the Australian environment; estradiol, genistein and atrazine.Read moreRead less
The genomic programming of complex organisms. The project will have far-reaching consequences in medicine, agriculture, biotechnology, engineering, information science and associated industries. It will provide a platform for the rationalization of genetic epidemiology and genetic improvement programs, the development of a wide range of new diagnostics and therapies, the development of new core technologies and practical approaches in genetics and genetic diversity, a framework for advanced gen ....The genomic programming of complex organisms. The project will have far-reaching consequences in medicine, agriculture, biotechnology, engineering, information science and associated industries. It will provide a platform for the rationalization of genetic epidemiology and genetic improvement programs, the development of a wide range of new diagnostics and therapies, the development of new core technologies and practical approaches in genetics and genetic diversity, a framework for advanced genetic engineering, the development of new principles and systems for information storage and transmission, and the design of artificial systems capable of self-referential assembly in other environments.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE130100894
Funder
Australian Research Council
Funding Amount
$361,140.00
Summary
Nanolamps: unlocking targeted gene silencing in deep tissue with nanoparticle-based light sources. In order to better understand the function of genes, this project will develop a new method of tightly targeted gene silencing deep inside of the body by nanoscale light sources. This will shed new light on the nervous system and, in the first instance, help to elucidate the role of the PACAP neurons in blood pressure regulation.
An Integrated Assessment of the Impacts of Climate Change on Victorian Alpine Ecosystems: Detecting and Managing Ecological Change. Climate change threatens biodiversity in alpine areas of Australia. This project seeks to predict how plants, soils and small animals will respond to warming and the associated increased risk of bushfire. Our project uses chambers placed out in the field to simulate warming conditions, and measures plant growth and development, and small animal community structure w ....An Integrated Assessment of the Impacts of Climate Change on Victorian Alpine Ecosystems: Detecting and Managing Ecological Change. Climate change threatens biodiversity in alpine areas of Australia. This project seeks to predict how plants, soils and small animals will respond to warming and the associated increased risk of bushfire. Our project uses chambers placed out in the field to simulate warming conditions, and measures plant growth and development, and small animal community structure within the chambers. We also assess the effects of climate change on soil processes. The information is used to evaluate the ability of alpine plants and animals to deal with climate change and to identify ways managers can help maintain biodiversity in this fragile ecosystem. Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE160100002
Funder
Australian Research Council
Funding Amount
$1,040,000.00
Summary
Distributed Memory Cluster for the Intersect consortium of universities. Distributed memory cluster:
This project aims to establish a new supercomputing facility. The NSW research community has used high performance computing (HPC) to achieve major breakthroughs across a diverse range of disciplines including astrophysics, bioinformatics, environmental science, information technology and engineering. As the use of HPC increases, the application-specific needs of the research community become mo ....Distributed Memory Cluster for the Intersect consortium of universities. Distributed memory cluster:
This project aims to establish a new supercomputing facility. The NSW research community has used high performance computing (HPC) to achieve major breakthroughs across a diverse range of disciplines including astrophysics, bioinformatics, environmental science, information technology and engineering. As the use of HPC increases, the application-specific needs of the research community become more diverse, requiring greater flexibility as well as higher performance. The present facility is no longer internationally competitive, and is hampering progress in cutting edge research. The new cluster is designed to provide a greater than 10-fold increase in computing capability.Read moreRead less