Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0775726
Funder
Australian Research Council
Funding Amount
$306,270.00
Summary
Australian Mirror of the UCSC Genome Database and Browser. Modern medical, biological, agricultural, and environmental research and industries are being transformed by access to genomic information that details the DNA sequence of various species, as well as of different strains and individuals within populations. This information is being generated at an exponentially increasing speed, and requires large computational resources. This facility will provide Australian researchers, R&D organizati ....Australian Mirror of the UCSC Genome Database and Browser. Modern medical, biological, agricultural, and environmental research and industries are being transformed by access to genomic information that details the DNA sequence of various species, as well as of different strains and individuals within populations. This information is being generated at an exponentially increasing speed, and requires large computational resources. This facility will provide Australian researchers, R&D organizations and industry with state-of-the-art genomic data storage and analysis capability, which will permit both public and proprietary access, and accelerate Australian research and development in genetic medicine, pharmaceuticals, animal breeding and biodiversity.Read moreRead less
Intron encoded RNA regulatory networks in yeast. This project has the capacity to transform our understanding of the evolution, development and genetic variation of complex organisms, as well as the self-organization of complex systems in general. The national and community benefits of the project will be to maintain Australian leadership in advanced genetics and genome-phenome informatics. It will provide a platform for many applications in biology and biotechnology, including new genetic diagn ....Intron encoded RNA regulatory networks in yeast. This project has the capacity to transform our understanding of the evolution, development and genetic variation of complex organisms, as well as the self-organization of complex systems in general. The national and community benefits of the project will be to maintain Australian leadership in advanced genetics and genome-phenome informatics. It will provide a platform for many applications in biology and biotechnology, including new genetic diagnostics and an informed basis for the engineering of complex traits in agriculture. The project will also provide insights into the structure of biological communication and control systems with applications in information science and the programming of integrated complex systems in other domains.Read moreRead less
Developing technology for the cost effective de novo sequencing and analysis of complex genomes. Applying the latest scientific advances supports society directly through promoting a knowledge based economy, as well as indirectly through securing agricultural productivity and improved biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian biomedical and biotechnology industries. Maintaining agricultural ....Developing technology for the cost effective de novo sequencing and analysis of complex genomes. Applying the latest scientific advances supports society directly through promoting a knowledge based economy, as well as indirectly through securing agricultural productivity and improved biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national challenge, both for rural and urban communities. This sequencing technology will provide a detailed understanding of crop genome structure and lead to the development of crops that are better suited to the Australian climate, supporting a sustainable agricultural industry. Read moreRead less
The molecular evolution of wings in flightless birds. The flightless Australian emu and New Zealand kiwi have small wings, while the extinct moa had none at all. This project will identify the genetic changes that have lead to wing reduction and loss in flightless birds. The results will shed light on the genetic control of forelimb development and how it has evolved.
Characterising genetic variation in Brassica napus. Applying the latest scientific advances supports society through promoting a knowledge based economy, as well as through securing agricultural productivity and biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian agricultural, biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national ....Characterising genetic variation in Brassica napus. Applying the latest scientific advances supports society through promoting a knowledge based economy, as well as through securing agricultural productivity and biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian agricultural, biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national challenge, both for rural and urban communities. This technology will provide a detailed understanding of crop genome variation in relation to agronomic traits and lead to the development of crops that are better suited to the Australian climate, supporting a sustainable agricultural industry.Read moreRead less
Mapping recombination blocks in Brassica. DNA technology provides new ways to study genomes. Understanding how the genome behaves during plant breeding will help design strategies for the breeding and selection of improved crop plants.
Functionally characterizing mammalian microRNAs and mRNA interactions controlling cell division. This project addresses some of the most burning issues in molecular biology and genetic research, and the results will be widely applicable to a broad range of fields, including biotechnology, animal breeding, agricultural production, genetic engineering, medical science, and computational biology. By understanding the regulatory potential of microRNA molecules, we will understand more about species ....Functionally characterizing mammalian microRNAs and mRNA interactions controlling cell division. This project addresses some of the most burning issues in molecular biology and genetic research, and the results will be widely applicable to a broad range of fields, including biotechnology, animal breeding, agricultural production, genetic engineering, medical science, and computational biology. By understanding the regulatory potential of microRNA molecules, we will understand more about species diversity, regulatory networks, and plant and animal development. The early adoption of multi-gigabase next-generation sequencing technology in Australia provides rare and exciting opportunity to lead the world in genome-scale research, and to ensure that Australia has the necessary skill base to remain internationally competitive in this field.Read moreRead less
The genomic programming of complex organisms. The project will have far-reaching consequences in medicine, agriculture, biotechnology, engineering, information science and associated industries. It will provide a platform for the rationalization of genetic epidemiology and genetic improvement programs, the development of a wide range of new diagnostics and therapies, the development of new core technologies and practical approaches in genetics and genetic diversity, a framework for advanced gen ....The genomic programming of complex organisms. The project will have far-reaching consequences in medicine, agriculture, biotechnology, engineering, information science and associated industries. It will provide a platform for the rationalization of genetic epidemiology and genetic improvement programs, the development of a wide range of new diagnostics and therapies, the development of new core technologies and practical approaches in genetics and genetic diversity, a framework for advanced genetic engineering, the development of new principles and systems for information storage and transmission, and the design of artificial systems capable of self-referential assembly in other environments.Read moreRead less
Discovery of pathways to embryogenesis in pathogenic flatworm parasites using microdissection and transcriptomic technologies. The cost to Australia of flatworm parasites to animal production and human health is substantial (hundreds of millions of dollars per year). This research will give new insights into how flatworms reproduce and equip their progeny for survival, providing impetus for new vaccine or drug therapies to be developed. As these pathogens are more significant in Australia's ne ....Discovery of pathways to embryogenesis in pathogenic flatworm parasites using microdissection and transcriptomic technologies. The cost to Australia of flatworm parasites to animal production and human health is substantial (hundreds of millions of dollars per year). This research will give new insights into how flatworms reproduce and equip their progeny for survival, providing impetus for new vaccine or drug therapies to be developed. As these pathogens are more significant in Australia's near neighbours, this project will strengthen Australia's international leadership in this field. Our study will provide, for the first time for any helminth parasite, a freely available genetic database that profiles the gene expression repertoire of individual parasite tissues, a development likely to enhance the international effort in controlling these harmful diseases.Read moreRead less
Insect host/vector genetic responses to rhabdovirus infection. Rhabdoviruses cause important diseases in humans, animals and plants. These viruses are transmitted by insect vectors in which they persist and propagate, an intimate and specific association. Insect-rhabdovirus interactions will be studied at the molecular level using a planthopper-maize rhabdovirus model. Insect genes specifically induced by rhabdovirus infection as well as the viral genes themselves will be identified and characte ....Insect host/vector genetic responses to rhabdovirus infection. Rhabdoviruses cause important diseases in humans, animals and plants. These viruses are transmitted by insect vectors in which they persist and propagate, an intimate and specific association. Insect-rhabdovirus interactions will be studied at the molecular level using a planthopper-maize rhabdovirus model. Insect genes specifically induced by rhabdovirus infection as well as the viral genes themselves will be identified and characterized using genomics and bioinformatics tools. We will extend the same approaches to a comparative analysis of these planthopper genes with other insect-rhabdovirus systems under investigation in our institutes. Identification of viral genes expressed in insects, the insect genes that respond to virus infection, and interpretation of the roles of these genes in insects, may indicate new opportunities to control serious plant and animal diseases through control of virus transmission.Read moreRead less