Designing microarray experiments. Microarrays are powerful tools for surveying the expression levels of many thousands of genes simultaneously. They belong to the new genomics technologies which have important applications in the biological, pharmaceutical and agricultural sciences. There are many sources of uncertainty in microarray experimentation and good statistical designs are essential for ensuring that the effects of interest to scientists are accurately and precisely measured. This Pr ....Designing microarray experiments. Microarrays are powerful tools for surveying the expression levels of many thousands of genes simultaneously. They belong to the new genomics technologies which have important applications in the biological, pharmaceutical and agricultural sciences. There are many sources of uncertainty in microarray experimentation and good statistical designs are essential for ensuring that the effects of interest to scientists are accurately and precisely measured. This Project will develop novel designs for microarray experiments and focus on the advancement of topics crucial to Australia's success in technological research.
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Congestion recovery and optimisation of patient flows. Australian public hospitals often experience congestion due to growing demand and limited resources, resulting in disruptions in service delivery and risks in quality of care. This project will apply advanced techniques and methodologies from mathematical sciences and computer modelling to alleviate this important healthcare delivery problem.
Discovery Early Career Researcher Award - Grant ID: DE160100690
Funder
Australian Research Council
Funding Amount
$373,316.00
Summary
Mathematical modelling of the early stages of multicellular evolution. This project aims to develop new mathematical methodology to understand the early stages of the evolution of multicellular organisms from unicellular ancestors. This is the best known example of the creation of a new level of biological organisation. However, the early stages of this transition are poorly understood, especially how early groups of cells came to possess Darwinian characteristics, which then allows natural sele ....Mathematical modelling of the early stages of multicellular evolution. This project aims to develop new mathematical methodology to understand the early stages of the evolution of multicellular organisms from unicellular ancestors. This is the best known example of the creation of a new level of biological organisation. However, the early stages of this transition are poorly understood, especially how early groups of cells came to possess Darwinian characteristics, which then allows natural selection to act on them. It is anticipated that the models produced will be used to give the first mechanistic account of this intrinsically stochastic, multi-level, phenomenon. This may lead to new insights into the emergence and subsequent evolution of simple multicellular life cycles and early forms of development.Read moreRead less
Strategic integration of renewable energy systems into the electricity grid. The Intergovernmental Panel on Climate Change states that 'warming of the climate system is unequivocal' and there is high probability it is anthropogenic. In response to the growing awareness of climate change, there is an expansion in Australia in the use of renewable energy resources in electricity generation, albeit from a low base. The various renewable energy systems have differing patterns of availability and vol ....Strategic integration of renewable energy systems into the electricity grid. The Intergovernmental Panel on Climate Change states that 'warming of the climate system is unequivocal' and there is high probability it is anthropogenic. In response to the growing awareness of climate change, there is an expansion in Australia in the use of renewable energy resources in electricity generation, albeit from a low base. The various renewable energy systems have differing patterns of availability and volatility, and it is difficult to determine the right mixture to best match the demand. It is imperative that future growth be structured so that both maximum grid penetration, and required greenhouse gas reductions be attained. Read moreRead less
Modelling mean and dispersion using fixed and random effects. The aims of the project are to develop methods for joint mean and dispersion modelling using fixed and random effects, in the generalized linear models context and for Gaussian longitudinal data. The significance is the more efficient, precise and appropriate analysis of data arising from many areas of application. The expected outcomes are therefore better methods of analysis, software to carry the analyses out, and potentially impor ....Modelling mean and dispersion using fixed and random effects. The aims of the project are to develop methods for joint mean and dispersion modelling using fixed and random effects, in the generalized linear models context and for Gaussian longitudinal data. The significance is the more efficient, precise and appropriate analysis of data arising from many areas of application. The expected outcomes are therefore better methods of analysis, software to carry the analyses out, and potentially important results in applications.Read moreRead less
Classification methods for providing personalised and class decisions. This project provides a novel approach to the clustering of multivariate samples on entities in a class that automatically matches the sample clusters across the entities, allowing for inter-sample variation between the samples in a class. The project aims to develop a widely applicable, mixture-model-based framework for the simultaneous clustering of multivariate samples with inter-sample variation in a class and for the mat ....Classification methods for providing personalised and class decisions. This project provides a novel approach to the clustering of multivariate samples on entities in a class that automatically matches the sample clusters across the entities, allowing for inter-sample variation between the samples in a class. The project aims to develop a widely applicable, mixture-model-based framework for the simultaneous clustering of multivariate samples with inter-sample variation in a class and for the matching of the clusters across the entities in the class. The project will use a statistical approach to automatically match the clusters, since the overall mixture model provides a template for the class. It will provide a basis for discriminating between different classes in addition to the identification of atypical data points within a sample and of anomalous samples within a class. Key applications include biological image analysis and the analysis of data in flow cytometry which is one of the fundamental research tools for the life scientist.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE160101565
Funder
Australian Research Council
Funding Amount
$330,000.00
Summary
Flexible data modelling via skew mixture models:challenges and applications. This project seeks to explore new models for handling data with non-normal features. Parametric distributions are fundamental to statistical modelling and inference. For centuries, the ‘normal’ distribution has been the dominant model for continuous data. However, real data rarely satisfy the assumption of normality. There is thus a strong demand for more flexible distributions. This project aims to develop new methodol ....Flexible data modelling via skew mixture models:challenges and applications. This project seeks to explore new models for handling data with non-normal features. Parametric distributions are fundamental to statistical modelling and inference. For centuries, the ‘normal’ distribution has been the dominant model for continuous data. However, real data rarely satisfy the assumption of normality. There is thus a strong demand for more flexible distributions. This project aims to develop new methodologies in finite mixture modelling using skew component distributions to provide better models for handling data with non-normal features (such as skewness, heavy/light tails, and multimodality). Applications may include security intrusion detection, clinical diagnosis and prognosis, and flow and mass cytometry.Read moreRead less
WaterLog - A mathematical model to implement recommendations of The Wentworth Group. In 2003, The Wentworth Group of Concerned Scientists released their 'Blueprint for a national water plan' with the primary objective to 'protect river health and the rights of all Australians to clean usable water'. Currently, there are significant water restrictions in all the Australian mainland capital cities. In January 2007, the Prime Minister of Australia, announced a bold plan to rescue the Murray-Darling ....WaterLog - A mathematical model to implement recommendations of The Wentworth Group. In 2003, The Wentworth Group of Concerned Scientists released their 'Blueprint for a national water plan' with the primary objective to 'protect river health and the rights of all Australians to clean usable water'. Currently, there are significant water restrictions in all the Australian mainland capital cities. In January 2007, the Prime Minister of Australia, announced a bold plan to rescue the Murray-Darling Basin. The plan incorporates political management changes, and an investment of $10Bn. Now is the time to develop improved techniques for management of water storage systems. This project will develop the fundamental mathematical principles required for this improved management.Read moreRead less
Computational methods for population-size-dependent branching processes. Branching processes are the primary mathematical tool used to model populations that evolve randomly in time. Most key results in the theory are derived under the simplifying assumption that individuals reproduce and die independently of each other. However, this assumption fails in most real-life situations, in particular when the environment has limited resources or when the habitat has a restricted capacity. This project ....Computational methods for population-size-dependent branching processes. Branching processes are the primary mathematical tool used to model populations that evolve randomly in time. Most key results in the theory are derived under the simplifying assumption that individuals reproduce and die independently of each other. However, this assumption fails in most real-life situations, in particular when the environment has limited resources or when the habitat has a restricted capacity. This project aims to develop novel and effective algorithmic techniques and statistical methods for a class of branching processes with dependences. We will use these results to study significant problems in the conservation of endangered island bird populations in Oceania, and to help inform their conservation management.Read moreRead less
Operator-Analytic Methods in Telecommunication Systems. Many systems in information technology and telecommunications evolve under conditions of uncertainty. In this context, mathematical modelling is an essential component of the design process. We shall provide techniques for analysing a class of mathematical models, called operator-analytic models, which can be used to study many of the above-mentioned systems, such as the Internet. This project will deliver efficient numerical algorithms tha ....Operator-Analytic Methods in Telecommunication Systems. Many systems in information technology and telecommunications evolve under conditions of uncertainty. In this context, mathematical modelling is an essential component of the design process. We shall provide techniques for analysing a class of mathematical models, called operator-analytic models, which can be used to study many of the above-mentioned systems, such as the Internet. This project will deliver efficient numerical algorithms that will make possible practical analysis of operator-analytic models.Read moreRead less