Sex chromosomes and speciation: chromosome inversion and the large Z-effect. This project aims to understand the divergence of species and the importance of two genomic features of often disproportionately large effect between young taxa – the sex chromosomes, and chromosome inversions. The research will integrate genomics and transcriptomics with the study of traits closely aligned to speciation in birds – song, colour, and sperm morphology and protein composition. The project will provide sign ....Sex chromosomes and speciation: chromosome inversion and the large Z-effect. This project aims to understand the divergence of species and the importance of two genomic features of often disproportionately large effect between young taxa – the sex chromosomes, and chromosome inversions. The research will integrate genomics and transcriptomics with the study of traits closely aligned to speciation in birds – song, colour, and sperm morphology and protein composition. The project will provide significant benefits such as enhancing Australia’s strength in the field of evolutionary biology.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE130100218
Funder
Australian Research Council
Funding Amount
$373,172.00
Summary
Can species interactions drive diversification? Species interactions may drive the evolution of species diversity but we currently lack the empirical evidence to demonstrate conclusively how this occurs. Using a group of closely-related species native to Australia's rainforest, this study will test how species interactions drive the evolution of mating traits and the formation of new species.
Explaining virus diversity. To prevent virus pandemics, it is necessary to understand how viruses evolve. This project aims to reveal the long-term trends, processes and drivers of RNA virus diversity and evolution. Through the metagenomic sequencing of the viromes of Australian animals that mark evolutionary innovations and transitions this project will reshape our knowledge of virus evolution and disease emergence. Expected outcomes will be a new understanding of how virus diversity is created ....Explaining virus diversity. To prevent virus pandemics, it is necessary to understand how viruses evolve. This project aims to reveal the long-term trends, processes and drivers of RNA virus diversity and evolution. Through the metagenomic sequencing of the viromes of Australian animals that mark evolutionary innovations and transitions this project will reshape our knowledge of virus evolution and disease emergence. Expected outcomes will be a new understanding of how virus diversity is created, how virus phenotypes have changed through time, how often viruses jump to new host species, and how major events in animal evolution have shaped virus diversity. Key benefits include new measures of the viral burden faced by Australia’s native animals and of ecosystem health.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE190100544
Funder
Australian Research Council
Funding Amount
$344,682.00
Summary
The drivers of genome evolution and diversification in marsupials. This project aims to investigate the impact of the four basic forces of evolution, mutation, selection, neutral drift, and gene flow, on the genome. Genome-scale data have a signature of these forces and extracting it would greatly improve the quality of evolutionary models fit to the data, but the framework to identify the evolutionary forces has not been developed. This project will develop tests for assessing the impact of the ....The drivers of genome evolution and diversification in marsupials. This project aims to investigate the impact of the four basic forces of evolution, mutation, selection, neutral drift, and gene flow, on the genome. Genome-scale data have a signature of these forces and extracting it would greatly improve the quality of evolutionary models fit to the data, but the framework to identify the evolutionary forces has not been developed. This project will develop tests for assessing the impact of the primary evolutionary forces on the genome, and test these methods using simulations. The new framework of genomic analysis will be disseminated through an intuitive software package, and will be used to estimate with unprecedented confidence the history of diversification and genome evolution of marsupials.Read moreRead less
The genetic architecture of colour polymorphism and speciation. Speciation, the process by which populations diverge and become distinct, is the engine that drives biodiversity and Darwin's 'mystery of mysteries'. Speciation is accelerated in species with multiple, discrete, coexisting colour forms; yet the genetic mechanisms underpinning this pattern are not known. This project aims to identify the genes underlying different colour forms and how they are distributed across the genome. The proj ....The genetic architecture of colour polymorphism and speciation. Speciation, the process by which populations diverge and become distinct, is the engine that drives biodiversity and Darwin's 'mystery of mysteries'. Speciation is accelerated in species with multiple, discrete, coexisting colour forms; yet the genetic mechanisms underpinning this pattern are not known. This project aims to identify the genes underlying different colour forms and how they are distributed across the genome. The project plans to test the prediction that these same areas of the genome show marked divergence between lineages that are in the process of becoming distinct species. Doing so may contribute significantly to our understanding of speciation, underlying genetic mechanisms, and genes generating colour variation in vertebrates.Read moreRead less
Recombination and the genomic landscape of speciation. This project aims to evaluate how genomes become different during the origin of species by utilising an innovative system where multiple replicates of the speciation process exist. This project expects to generate knowledge in the area of speciation genetics by exploring the effects of sex, migration and selection on the diversity of hundreds of genomes from an Australian wildflower. Expected outcomes of this project include a deeper underst ....Recombination and the genomic landscape of speciation. This project aims to evaluate how genomes become different during the origin of species by utilising an innovative system where multiple replicates of the speciation process exist. This project expects to generate knowledge in the area of speciation genetics by exploring the effects of sex, migration and selection on the diversity of hundreds of genomes from an Australian wildflower. Expected outcomes of this project include a deeper understanding of the maintenance of genetic diversity in natural populations, and development of a model organism for studying the genetics and ecology of speciation. This project should provide significant benefits including enhanced capacity in evolutionary genetics in Australia.Read moreRead less
Resolving insect evolution. Our poor understanding of the evolution of insects, life’s most successful group, is a huge gap in our knowledge of nature. By analysing genomic data the project will resolve the insect evolutionary tree and discover what drove insect evolution. This will expand our knowledge of how evolution works - a vital part of conserving our biological diversity.
Reconstructing the evolution of climatic tolerances in conifers. This project aims to trace the evolution of climate tolerance in conifers by combining evidence from fossils, phylogenies, physiology and mathematics. The project plans to use innovative methods to overcome the biases in methods currently used to trace evolutionary change. The project plans to integrate data from three sources: the global fossil record, new models of current climatic tolerances of conifers, and mathematical simulat ....Reconstructing the evolution of climatic tolerances in conifers. This project aims to trace the evolution of climate tolerance in conifers by combining evidence from fossils, phylogenies, physiology and mathematics. The project plans to use innovative methods to overcome the biases in methods currently used to trace evolutionary change. The project plans to integrate data from three sources: the global fossil record, new models of current climatic tolerances of conifers, and mathematical simulations of how and when methods of reconstructing ancestral ecology fail. The combined results should show how this important group of organisms has responded to past climate change and how they will respond in the future. It should also provide improved estimates of past terrestrial climates.Read moreRead less
The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molec ....The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molecular evolution between the X-chromosome and autosomes. Utilising Australia’s endemic mammalian fauna as a tractable model system, I will link population processes with macro-evolutionary outcomes to show how genome architecture underpins biodiversity.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE140101481
Funder
Australian Research Council
Funding Amount
$390,000.00
Summary
Integrating ecology and evolution: how does sexual selection affect population fitness and extinction? Improving our understanding of population fitness could produce important new advances in evolutionary and conservation biology. Sexual selection has been proposed to both help and harm population fitness, but unfortunately these opposing effects have been studied in isolation. This project will develop new theory to resolve confusion over the definition of population fitness and its relationsh ....Integrating ecology and evolution: how does sexual selection affect population fitness and extinction? Improving our understanding of population fitness could produce important new advances in evolutionary and conservation biology. Sexual selection has been proposed to both help and harm population fitness, but unfortunately these opposing effects have been studied in isolation. This project will develop new theory to resolve confusion over the definition of population fitness and its relationship with sexual selection. It also proposes ambitious experimental evolution and quantitative genetic studies that will empirically measure the net effect of sexual selection on population fitness and extinction. This project aims to catalyse a change in the study of population fitness and address a conspicuous gap in contemporary evolutionary biology.Read moreRead less