Reserving nitrogen in soils through microbial nitrate reduction to ammonium. This project aims to identify those microbes able to transform nitrate to ammonium and thus increase soil nitrogen conservation. More than 50 per cent of the nitrogen in fertilisers applied to soils is lost into the environment, which is both a financial loss to farmers and a main anthropogenic source of nitrogen pollution. Some microbes can transform nitrate into ammonium through dissimilatory reduction (DNRA) and thus ....Reserving nitrogen in soils through microbial nitrate reduction to ammonium. This project aims to identify those microbes able to transform nitrate to ammonium and thus increase soil nitrogen conservation. More than 50 per cent of the nitrogen in fertilisers applied to soils is lost into the environment, which is both a financial loss to farmers and a main anthropogenic source of nitrogen pollution. Some microbes can transform nitrate into ammonium through dissimilatory reduction (DNRA) and thus increase soil nitrogen retention. However, the DNRA process and the responsible microbial groups remain largely unknown. This project plans to use isotope tracing and biomolecular approaches to identify those DNRA microbial groups and elucidate the DNRA reaction process. The findings may support the use of DNRA to improve soil nitrogen.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE150100870
Funder
Australian Research Council
Funding Amount
$342,000.00
Summary
Unravelling the microbial mechanisms of soil nitrous oxide emissions. Soil ecosystems are believed to be the most dominant sources of global nitrous oxide emissions. However, mitigations of nitrous oxide are strongly hindered by lack of knowledge on microbial mechanisms underpinning its production. This project aims to integrate a range of advanced approaches to identify the key nitrogen cycling genes as best predictors of nitrous oxide in field studies, to disentangle relative contribution of m ....Unravelling the microbial mechanisms of soil nitrous oxide emissions. Soil ecosystems are believed to be the most dominant sources of global nitrous oxide emissions. However, mitigations of nitrous oxide are strongly hindered by lack of knowledge on microbial mechanisms underpinning its production. This project aims to integrate a range of advanced approaches to identify the key nitrogen cycling genes as best predictors of nitrous oxide in field studies, to disentangle relative contribution of microbial pathways to nitrous oxide in glasshouse and microcosm studies, and to validate these findings across various land-use types in Australia and China. This will provide a critical framework incorporating microbial data into the nitrous oxide prediction models for better mitigation of greenhouse gas emissions.Read moreRead less
Phosphorus cycling and adaptation of soil microbes to P availability . This project aims to determine how soil microbial communities adapt to phosphorus availability, and how the breakdown of microbial biomass sustains phosphorus demand. Using some of the most globally P-impoverished soils, the project expects to uncover how cellular composition of microbial populations is shaped by phosphorus availability, and feedbacks between cellular composition of microbes and phosphorus availability. Expec ....Phosphorus cycling and adaptation of soil microbes to P availability . This project aims to determine how soil microbial communities adapt to phosphorus availability, and how the breakdown of microbial biomass sustains phosphorus demand. Using some of the most globally P-impoverished soils, the project expects to uncover how cellular composition of microbial populations is shaped by phosphorus availability, and feedbacks between cellular composition of microbes and phosphorus availability. Expected outcomes include better understanding of factors determining phosphorus availability, and a new analytical toolkit for tracing pools and fluxes of organic P in soils. Overall, these should provide significant benefit to the global effort in understanding how phosphorus shapes soil function.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE210100271
Funder
Australian Research Council
Funding Amount
$452,005.00
Summary
Synthetic microbiome: improving crop nitrogen acquisition and productivity. Challenges to food security under conditions of global climate change are forcing us to increase crop production to feed the growing population. Focusing on the plant–microbe interactions, represent a promising area in the search for tools to address this challenge. This project aims to develop a three-step- framework that allows researchers to systematically and reproducibly investigate crop microbiomes to enable us to ....Synthetic microbiome: improving crop nitrogen acquisition and productivity. Challenges to food security under conditions of global climate change are forcing us to increase crop production to feed the growing population. Focusing on the plant–microbe interactions, represent a promising area in the search for tools to address this challenge. This project aims to develop a three-step- framework that allows researchers to systematically and reproducibly investigate crop microbiomes to enable us to design a ‘Beneficial Biome’, a biologically based solution for improving agricultural productivity and environmental sustainability under constrained conditions, where limited resources are available to fertilize.Read moreRead less
Soil microbial indicators for efficient use of nitrification inhibitors. Soil microbial indicators for efficient use of nitrification inhibitors. This project aims to improve understanding of the efficiency and governing factors of nitrification inhibitors in different agricultural soils. Nitrification inhibitors are widely used to improve nitrogen fertiliser efficiency and reduce greenhouse gas nitrous oxide emissions. However, their effectiveness varies across soil types. One possible reason i ....Soil microbial indicators for efficient use of nitrification inhibitors. Soil microbial indicators for efficient use of nitrification inhibitors. This project aims to improve understanding of the efficiency and governing factors of nitrification inhibitors in different agricultural soils. Nitrification inhibitors are widely used to improve nitrogen fertiliser efficiency and reduce greenhouse gas nitrous oxide emissions. However, their effectiveness varies across soil types. One possible reason is the different microbial communities in these soils. The project will address the key knowledge gaps of interactions between the nitrification inhibitors and the soil functional microbial communities. Anticipated outcomes are sound management strategies to improve fertiliser nitrogen use efficiency in Australian agricultural soils.Read moreRead less
Unraveling the spread of antibiotic resistance genes across soil food webs. The emerging spread of antibiotic resistance genes (ARGs) in the environment is a major threat to public health and food security. This project aims to develop new knowledge about the key transmission routes of ARGs across multiple trophic levels in soil food webs, and how the interactions of plant, soil and fauna contribute to the profiles of environmental ARGs. Expected outcomes include an improved understanding of the ....Unraveling the spread of antibiotic resistance genes across soil food webs. The emerging spread of antibiotic resistance genes (ARGs) in the environment is a major threat to public health and food security. This project aims to develop new knowledge about the key transmission routes of ARGs across multiple trophic levels in soil food webs, and how the interactions of plant, soil and fauna contribute to the profiles of environmental ARGs. Expected outcomes include an improved understanding of the role of fauna in regulating ARGs in the soil environment and the spreading mechanisms of antibiotic resistance in soil food webs. This project will contribute to the development of evidence-based interventions to tackle environmental antibiotic resistance, which has benefits for the environment and public health.
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Discovery Early Career Researcher Award - Grant ID: DE160100248
Funder
Australian Research Council
Funding Amount
$368,600.00
Summary
Annotating unknown microbial gene functions with organic matter change. This project intends to develop a new method for determining the function of microbial genomes. Microbes are all pervasive on Earth. It is now possible to routinely sequence microbial genomes. However, the function of most genes encoded on these genomes remains elusive, severely limiting our understanding of most ecosystems. This project seeks to develop new methods to assign function to uncharacterised genes, by correlating ....Annotating unknown microbial gene functions with organic matter change. This project intends to develop a new method for determining the function of microbial genomes. Microbes are all pervasive on Earth. It is now possible to routinely sequence microbial genomes. However, the function of most genes encoded on these genomes remains elusive, severely limiting our understanding of most ecosystems. This project seeks to develop new methods to assign function to uncharacterised genes, by correlating changes in metabolite abundance with gene expression in a model permafrost thaw peatland. Determining the function of uncharacterised genes has widespread implications for microbial ecology and its numerous real-world applications, from determining soil greenhouse gas emissions to understanding human intestinal flora.Read moreRead less
Contribution of comammox bacteria to soil nitrification. This project aims to understand the diversity, activity and environmental relevance of comammox bacteria, the newly-discovered complete nitrifiers, in Australian soils, and to evaluate their relative contributions to nitrification processes compared to other canonical nitrifying prokaryotes. Nitrogen transformations are pivotal microbial processes, with nitrification largely responsible for nitrogen losses through nitrous oxide emissions a ....Contribution of comammox bacteria to soil nitrification. This project aims to understand the diversity, activity and environmental relevance of comammox bacteria, the newly-discovered complete nitrifiers, in Australian soils, and to evaluate their relative contributions to nitrification processes compared to other canonical nitrifying prokaryotes. Nitrogen transformations are pivotal microbial processes, with nitrification largely responsible for nitrogen losses through nitrous oxide emissions and nitrate leaching in the terrestrial ecosystems. The expected outcomes will develop new knowledge on the comammox bacteria and provide novel insights into refined strategies to manipulate nitrification processes for improved nitrogen use efficiency and sustainable agricultural management.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE200100156
Funder
Australian Research Council
Funding Amount
$471,000.00
Summary
A facility for quantification and isotopic analysis of trace gases. This project aims to develop a new facility for the analysis of trace gases, including nitrous oxide, methane, hydrogen, carbon monoxide, and nitric oxide. This will provide two new capabilities for Australia: 1. It will further our ability to study how microbes cycle trace gases across the continuum from arid soils to the coastal ocean; 2. It will allow us to better understand microbial reactions that remove nitrogen pollution. ....A facility for quantification and isotopic analysis of trace gases. This project aims to develop a new facility for the analysis of trace gases, including nitrous oxide, methane, hydrogen, carbon monoxide, and nitric oxide. This will provide two new capabilities for Australia: 1. It will further our ability to study how microbes cycle trace gases across the continuum from arid soils to the coastal ocean; 2. It will allow us to better understand microbial reactions that remove nitrogen pollution. This will allow us to better understand, monitor and manage microbial processes within soils, sediments, and waters that undertake key ecosystem services, including removal of nitrogen and pollutant gases. Read moreRead less
In situ remediation in mine site rehabilitation. In situ remediation in mine site rehabilitation. By enhancing and guiding abiotic and biotic processes of soil development, this project aims to accelerate the in situ remediation of bauxite residue (alumina refining tailings). Over 7 gigatonnes of tailings are produced globally every year, comprising complex mineral assemblages at extremes of pH and salinity with minimal biological activity. This project will build detailed knowledge on the chemi ....In situ remediation in mine site rehabilitation. In situ remediation in mine site rehabilitation. By enhancing and guiding abiotic and biotic processes of soil development, this project aims to accelerate the in situ remediation of bauxite residue (alumina refining tailings). Over 7 gigatonnes of tailings are produced globally every year, comprising complex mineral assemblages at extremes of pH and salinity with minimal biological activity. This project will build detailed knowledge on the chemical, physical, and biological properties of bauxite residue and apply this to develop field-scale in situ remediation strategies. This research will also advance understanding of soil development and primary succession of microbial communities in extreme, anthropogenic environments such as those presented by tailings.Read moreRead less