Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0775503
Funder
Australian Research Council
Funding Amount
$255,000.00
Summary
Robotics for plant genomics: Increasing throughput in plant genetic analyses. Plant genomics has direct benefit to crop improvement, especially as focussed in the applicants' laboratories. Thus, the Australian agri-food sector will benefit substantially from the acceleration in plant functional genomics that will arise from the installation of the robotics equipment described in the current application, by both underpinning more applied research and also being used directly in crop improvement p ....Robotics for plant genomics: Increasing throughput in plant genetic analyses. Plant genomics has direct benefit to crop improvement, especially as focussed in the applicants' laboratories. Thus, the Australian agri-food sector will benefit substantially from the acceleration in plant functional genomics that will arise from the installation of the robotics equipment described in the current application, by both underpinning more applied research and also being used directly in crop improvement programs such as are based at the Waite Campus. The outputs will include crops with increased tolerance to biotic and abiotic stresses, a reduced dependence on chemical inputs such as fertilisers and improved food quality, with consequent benefits to the environment and human health and nutrition.Read moreRead less
How common and what is the significance of cis-acting regulatory variation and genomic imprinting in plants? Plant based processes provide truly sustainable solutions to many of the challenges facing Australia. The proposed research will help elucidate how plants regulate variation in gene expression rather than changes in the structure of encoded proteins. This is an area of gene expression, that has not been approached before, that explains the plant's ability to respond to external stimuli. ....How common and what is the significance of cis-acting regulatory variation and genomic imprinting in plants? Plant based processes provide truly sustainable solutions to many of the challenges facing Australia. The proposed research will help elucidate how plants regulate variation in gene expression rather than changes in the structure of encoded proteins. This is an area of gene expression, that has not been approached before, that explains the plant's ability to respond to external stimuli. Variation between plant species in the number of genes does not fully explain the differences between them. This information will come not from seqenceing genomes but from investigation of regulatory elements. Read moreRead less
The genetic and molecular organisation of the self incompatibility gene region in the grasses. Self-incompatibility (SI) is a cell-cell recognition process used by plants to prevent self-pollination and force outcrossing. It is widespread, occurring in a third of plant families. Although studies of SI go back to the 1800s, the origin of SI remains a mystery. Recent advances in the molecular characterisation of SI loci in some species has re-ignited debate on its origins but has provided few answ ....The genetic and molecular organisation of the self incompatibility gene region in the grasses. Self-incompatibility (SI) is a cell-cell recognition process used by plants to prevent self-pollination and force outcrossing. It is widespread, occurring in a third of plant families. Although studies of SI go back to the 1800s, the origin of SI remains a mystery. Recent advances in the molecular characterisation of SI loci in some species has re-ignited debate on its origins but has provided few answers. This project uses the grasses to explore the origins of SI. As a model system, the grasses offer detailed genetic and molecular data and aspects of floral architecture associated with SI can be investigatedRead moreRead less
Diversity in large crop genomes via enhanced recombination. The project aims to understand genetic and environmental factors that limit how fast genomic combinations can be generated by modifying the recombination rates between chromosomes. Plant breeding is based around genetic diversity, but modern breeding programs have captured only a small proportion of the variation available in wild relatives and land races. Knowledge of diversity in this wild germplasm pool is increasing and the challeng ....Diversity in large crop genomes via enhanced recombination. The project aims to understand genetic and environmental factors that limit how fast genomic combinations can be generated by modifying the recombination rates between chromosomes. Plant breeding is based around genetic diversity, but modern breeding programs have captured only a small proportion of the variation available in wild relatives and land races. Knowledge of diversity in this wild germplasm pool is increasing and the challenge is to quickly and efficiently introduce this variation into elite lines. This project’s findings are expected to transform wheat and barley breeding methods by unlocking the genetic diversity to produce new varieties. This will enhance and protect a critical and valuable rural industry.Read moreRead less
How do plant roots align nitrogen uptake to soil opportunities? Improved nitrogen use efficiency (NUE) in crop plants is required to achieve sustainable plant agriculture practices that maximise productivity while minimising nitrogen fertiliser-dependent pollution. Current high-input monoculture plant production systems suffer from poor NUE and can contribute to local and global nitrogen pollution outcomes. Improving how plants manage their nitrogen uptake will improve NUE and help support Aust ....How do plant roots align nitrogen uptake to soil opportunities? Improved nitrogen use efficiency (NUE) in crop plants is required to achieve sustainable plant agriculture practices that maximise productivity while minimising nitrogen fertiliser-dependent pollution. Current high-input monoculture plant production systems suffer from poor NUE and can contribute to local and global nitrogen pollution outcomes. Improving how plants manage their nitrogen uptake will improve NUE and help support Australian plant agriculture. This project will investigate novel technologies that re-engineer nitrate transport activity. The project will also investigate the biochemical and molecular links between nitrogen uptake on root development required for improved plant growth.Read moreRead less
Adding value to waste products from the brewing industry. Adding value to waste products from the brewing industry. This project aims to extract value from spent barley grains, the major by-product of the brewing industry. Currently sold as animal feed, this waste stream is a raw source of valuable carbohydrates and proteins for functional foods, packaging materials and liquid biofuels. This project will combine multidisciplinary approaches to characterise spent grain components and optimise rel ....Adding value to waste products from the brewing industry. Adding value to waste products from the brewing industry. This project aims to extract value from spent barley grains, the major by-product of the brewing industry. Currently sold as animal feed, this waste stream is a raw source of valuable carbohydrates and proteins for functional foods, packaging materials and liquid biofuels. This project will combine multidisciplinary approaches to characterise spent grain components and optimise release of bioactive molecules for use as prebiotics, antioxidants, nutraceuticals, and modifiers of beer quality. The research is expected to generate resources for studying barley grain, intellectual property, patents and new in-line processes for the brewing industry.Read moreRead less
Harnessing genetic diversity for complex traits. Genetic diversity underpins crop improvement but has become increasingly narrow in our major crops. Strategies exist for mobilising simple traits (e.g. disease resistance) from wild accessions or landraces into cultivars, but there are no effective approaches for introducing complex traits, including stress tolerance or components of yield. Using barley as an important crop and a genetic model, the project aims to address this problem by applying ....Harnessing genetic diversity for complex traits. Genetic diversity underpins crop improvement but has become increasingly narrow in our major crops. Strategies exist for mobilising simple traits (e.g. disease resistance) from wild accessions or landraces into cultivars, but there are no effective approaches for introducing complex traits, including stress tolerance or components of yield. Using barley as an important crop and a genetic model, the project aims to address this problem by applying a novel approach; partial redomestication of wild accessions by introgressing genes required for modern farming, then evaluating the resulting partially adapted germplasm in hybrids with elite cultivars. The project expects to generate new and diverse germplasm pools for breeding.Read moreRead less
Early Career Industry Fellowships - Grant ID: IE230100282
Funder
Australian Research Council
Funding Amount
$475,181.00
Summary
Delivering breeding-oriented genetic tools for cereal disease resistance. This project will focus specifically on delivering the genetic tools to the industry partner to assist its wheat and barley breeders to increase the accuracy and efficiency of incorporating the durable wheat stripe rust disease and barley leaf rust disease resistance into their core germplasm collections, respectively. The expected outcomes will also contribute to filling our knowledge gap in understanding the cereal rust ....Delivering breeding-oriented genetic tools for cereal disease resistance. This project will focus specifically on delivering the genetic tools to the industry partner to assist its wheat and barley breeders to increase the accuracy and efficiency of incorporating the durable wheat stripe rust disease and barley leaf rust disease resistance into their core germplasm collections, respectively. The expected outcomes will also contribute to filling our knowledge gap in understanding the cereal rust innate immune system and benefit other cereal fungal pathosystems. The wide application of the expected outcomes from the proposed project will reduce the utilisation of fungicides and subsequently will subsequently contribute to the resilience of cereal crops and sustainable global food security.Read moreRead less
Reconstructing wheat evolution using ancient DNA. The domestication of wild grasses by farmers was a step change in human history; it led to the emergence of modern cereals and with them, western civilisation. This project will apply modern DNA sequencing methods to 5000-year-old cereal seeds to reconstruct the history of wheat, barley and other crops, and identify lost ancient forms and diversity.
Unique parental epitranscriptome states regulate seed development. This project aims to investigate how developing central cell epitranscriptomes are linked to seed growth, how the cell regulates the unique epigenetic states, and the role of the system in driving phenotypic diversity. Maternal and paternal effects determine growth and development of multicellular angiosperm plants. Previous work has discovered unique ribonucleic acid (RNA) epitranscriptome states dependent on the parent-of-origi ....Unique parental epitranscriptome states regulate seed development. This project aims to investigate how developing central cell epitranscriptomes are linked to seed growth, how the cell regulates the unique epigenetic states, and the role of the system in driving phenotypic diversity. Maternal and paternal effects determine growth and development of multicellular angiosperm plants. Previous work has discovered unique ribonucleic acid (RNA) epitranscriptome states dependent on the parent-of-origin in developing central cell that gives rise to the endosperm tissue of the seed that impacts on growth of the seed. This project expects to provide economic benefits by increasing yield of agricultural crops during increasingly challenging conditions.Read moreRead less