Dynamic evolution of mutation rates: causes and impacts on genomic analysis. This project aims to illuminate the role of variation in mutation rate in driving evolutionary change. Mutation rate is a core parameter in evolutionary analyses in essential applications including epidemiology, conservation and medicine, yet remains a “black box” given arbitrary universal values. This project will take a whole-of-biodiversity approach to understanding the forces shaping mutation rate, impact on evoluti ....Dynamic evolution of mutation rates: causes and impacts on genomic analysis. This project aims to illuminate the role of variation in mutation rate in driving evolutionary change. Mutation rate is a core parameter in evolutionary analyses in essential applications including epidemiology, conservation and medicine, yet remains a “black box” given arbitrary universal values. This project will take a whole-of-biodiversity approach to understanding the forces shaping mutation rate, impact on evolution of biodiversity and effect on accuracy and precision of phylogenetic analyses. Using Australian case studies, the expected outcome of this project will be a greater understanding variation in mutation rate between species, providing significant benefits in developing more sophisticated and reliable phylogenetic analyses.Read moreRead less
Evolution and mechanisms of interactions in biofilm communities. This project aims to study the long-term experimental evolution of a mixed species bacterial biofilm community. This project expects to gain understanding of the genetic and physiological basis of community evolution. Expected outcomes of this project will be an understanding of how synthetic communities evolve. This will significantly benefit the use of synthetic communities relevant to fields such as antibiotic design, biotechnol ....Evolution and mechanisms of interactions in biofilm communities. This project aims to study the long-term experimental evolution of a mixed species bacterial biofilm community. This project expects to gain understanding of the genetic and physiological basis of community evolution. Expected outcomes of this project will be an understanding of how synthetic communities evolve. This will significantly benefit the use of synthetic communities relevant to fields such as antibiotic design, biotechnology, bioremediation, and synthetic biology where evolution can be inhibited or exploited, respectively.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE230100003
Funder
Australian Research Council
Funding Amount
$387,373.00
Summary
The evolution of venom and its role in shaping biodiversity. This project aims to study how venom, nature's most powerful weapon, evolves and shapes biodiversity. Using the iconic Australian and New Guinean venomous snakes as a model, this project expects to develop a novel approach to profile venom composition from museum specimens, test competing hypotheses on the evolution of venoms, and test for the association between the evolution of venoms and the evolution of diversity in species richnes ....The evolution of venom and its role in shaping biodiversity. This project aims to study how venom, nature's most powerful weapon, evolves and shapes biodiversity. Using the iconic Australian and New Guinean venomous snakes as a model, this project expects to develop a novel approach to profile venom composition from museum specimens, test competing hypotheses on the evolution of venoms, and test for the association between the evolution of venoms and the evolution of diversity in species richness and morphology. Expected outcomes include the largest venom database for any animal group and a better understanding of how venoms evolve and what role they play in earth’s biodiversity. The generated venom data has potential to be used in future studies to aid in the development of anti-venoms and drugs.Read moreRead less
How are visual gene pathways lost and restored during reptile evolution? This project aims to investigate how complex traits are lost during evolution, and once lost if they can be regained. The project will use the diverse visual systems of snakes and lizards to shed light on the process of gene loss in degenerative lineages, and discover the mechanisms that compensate for gene losses in taxa with secondarily evolved visual capabilities- providing a case of evolutionary re-innovation in complex ....How are visual gene pathways lost and restored during reptile evolution? This project aims to investigate how complex traits are lost during evolution, and once lost if they can be regained. The project will use the diverse visual systems of snakes and lizards to shed light on the process of gene loss in degenerative lineages, and discover the mechanisms that compensate for gene losses in taxa with secondarily evolved visual capabilities- providing a case of evolutionary re-innovation in complex traits.Read moreRead less
Evolving rates: foundations for the next generation of molecular clocks. This project aims to investigate the causes and consequences of variation in rate of DNA sequence evolution across three kingdoms of life. Dates estimated from DNA sequences have a wide range of applications, including evolutionary biology, conservation prioritisation and epidemiology. These methods rely on accurate rate estimates, but current models lack information about the biological drivers of rates of genomic change. ....Evolving rates: foundations for the next generation of molecular clocks. This project aims to investigate the causes and consequences of variation in rate of DNA sequence evolution across three kingdoms of life. Dates estimated from DNA sequences have a wide range of applications, including evolutionary biology, conservation prioritisation and epidemiology. These methods rely on accurate rate estimates, but current models lack information about the biological drivers of rates of genomic change. This project will test reliability of current methods, identify potentially misleading estimates of disease origin or conservation priorities, and develop new approaches with empirically-informed models of rate change.Read moreRead less
Linking Stress Tolerance to Molecular Evolution of Grass Stomata. Salinity and drought are two detrimental environmental stresses, affecting agricultural productivity and ecosystem health in Australia and around the world. This project will focus on the evolutionary, physiological and molecular aspects of stomatal regulation between wheat, barley and their wild relatives for salinity and drought tolerance. This project will advance the scientific knowledge in the evolution of stomatal regulation ....Linking Stress Tolerance to Molecular Evolution of Grass Stomata. Salinity and drought are two detrimental environmental stresses, affecting agricultural productivity and ecosystem health in Australia and around the world. This project will focus on the evolutionary, physiological and molecular aspects of stomatal regulation between wheat, barley and their wild relatives for salinity and drought tolerance. This project will advance the scientific knowledge in the evolution of stomatal regulation in two staple crops wheat and barley. The project will also assist plant breeders with increasing crop salinity and drought tolerance for global food security.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE190100491
Funder
Australian Research Council
Funding Amount
$418,386.00
Summary
Linking genomic changes to the generation of biodiversity. This project aims to provide a suite of theories, methods and software to enhance our understanding on how the generation of variation at molecular level is linked to the generation of species richness at lineage level. This new approach tests various ways that molecular changes are manifested as patterns of diversification, as revealed by genomic data analysed at the lineage level in phylogenetic studies. Expected outcomes of this proje ....Linking genomic changes to the generation of biodiversity. This project aims to provide a suite of theories, methods and software to enhance our understanding on how the generation of variation at molecular level is linked to the generation of species richness at lineage level. This new approach tests various ways that molecular changes are manifested as patterns of diversification, as revealed by genomic data analysed at the lineage level in phylogenetic studies. Expected outcomes of this project add to a growing body of evolutionary theory and provide practical phylogenetic tools for future analyses. These should benefit Australia by improving our understanding on the formation of Australia’s biodiversity hotspots.Read moreRead less
Earth's Dynamic Topography Through Space and Time. A key component of Earth’s topography remains enigmatic. This so-called dynamic topography is transient, varying in response to convection within Earth’s mantle. This project aims to use a data-driven computational approach to: (i) reconstruct the evolution of dynamic topography over the recent geological history of our planet (Cenozoic Era, 0-66 million years ago); and (ii) uncover the mechanisms controlling its spatial and temporal evolution. ....Earth's Dynamic Topography Through Space and Time. A key component of Earth’s topography remains enigmatic. This so-called dynamic topography is transient, varying in response to convection within Earth’s mantle. This project aims to use a data-driven computational approach to: (i) reconstruct the evolution of dynamic topography over the recent geological history of our planet (Cenozoic Era, 0-66 million years ago); and (ii) uncover the mechanisms controlling its spatial and temporal evolution. This transformational new understanding will connect the evolution of our planet's surface environments to its deep interior, revealing the impact of dynamic topography on sea level change, flooding, river networks, groundwater systems, habitat development and the distribution of economic resources. Read moreRead less
Shedding Light on the Proton Radius Puzzle with Ultracold Helium. This project aims to shed light on an outstanding discrepancy in physics known as the proton radius puzzle, first seen in hydrogen but now being studied in helium. Capitalising on existing international collaboration between experiment and theory to exploit the advantages of ultracold helium, this project aims to determine the isotopic nuclear charge radius difference with unprecedented precision, using our state-of-the-art quantu ....Shedding Light on the Proton Radius Puzzle with Ultracold Helium. This project aims to shed light on an outstanding discrepancy in physics known as the proton radius puzzle, first seen in hydrogen but now being studied in helium. Capitalising on existing international collaboration between experiment and theory to exploit the advantages of ultracold helium, this project aims to determine the isotopic nuclear charge radius difference with unprecedented precision, using our state-of-the-art quantum electrodynamic theory. This will not only answer fundamental questions about helium atomic structure, but may also reveal new physics beyond the current Standard Model. The validation of atomic structure theory should provide benefits in applications including the realisation of more accurate atomic clocks.Read moreRead less
Time-space resolved photoelectron emission to control molecular processes. This project aims to resolve simultaneously the timing and space localisation of photoelectron emission from atoms and molecules as a means for targeted breaking of molecular bonds. Existing techniques determine the timing and spatial characteristics of photoemission independently. The simultaneous time-space resolution will allow for the precise manipulation of photoelectrons by a sequence of phase-stabilised laser pulse ....Time-space resolved photoelectron emission to control molecular processes. This project aims to resolve simultaneously the timing and space localisation of photoelectron emission from atoms and molecules as a means for targeted breaking of molecular bonds. Existing techniques determine the timing and spatial characteristics of photoemission independently. The simultaneous time-space resolution will allow for the precise manipulation of photoelectrons by a sequence of phase-stabilised laser pulses, a technique known as coherent control. The benefit of this project will be the coherently controlled breaking of molecular bonds in oxide, carbonyl and hydrocarbon molecules. The outcome will be a significant step forward in driving complex photochemical reactions in industry.Read moreRead less