Movement patterns and habitat utilisation of the endangered eastern freshwater cod, Maccullochella ikei Rowland. The project aims to quantify the movement patterns and habitat utilisation of the endangered eastern freshwater cod (Maccullochella ikei) at a larval, juvenile, adult and historical level. Most previous studies regarding the life-history of fish species have failed to adopt this holistic approach, with management often based on fragmented information. The project will also provide an ....Movement patterns and habitat utilisation of the endangered eastern freshwater cod, Maccullochella ikei Rowland. The project aims to quantify the movement patterns and habitat utilisation of the endangered eastern freshwater cod (Maccullochella ikei) at a larval, juvenile, adult and historical level. Most previous studies regarding the life-history of fish species have failed to adopt this holistic approach, with management often based on fragmented information. The project will also provide an insight into the biology of one of the most poorly understood coastal stream fishes of eastern-Australia and assist in ensuring the conservation of this endangered species, and offer a framework from which future studies into the life history of freshwater fish species worldwide can be based.Read moreRead less
Conservation genetics of the Endangered Oxleyan Pygmy Perch Nannoperca oxleyana. The aim of this study is to determine how isolation of populations of the endangered Oxleyan Pygmy Perch Nannoperca Oxleyana affects their genetic composition. The significance of the study is that it will enhance our ability to conserve the species, and enhance our understanding of the genetics of isolated populations of freshwater fish generally.
Managing Tasmanian devil populations affected by the Devil Facial Tumour Disease. This project aims to put the science behind management options for wild Tasmanian devil populations affected by the Devil Facial Tumour Disease (DFTD), a new emerging wildlife disease that is decimating devil populations across large parts of Tasmania. DFTD behaves atypically compared with well-studied wildlife disease models; this project may result in important breakthroughs in our understanding of wildlife disea ....Managing Tasmanian devil populations affected by the Devil Facial Tumour Disease. This project aims to put the science behind management options for wild Tasmanian devil populations affected by the Devil Facial Tumour Disease (DFTD), a new emerging wildlife disease that is decimating devil populations across large parts of Tasmania. DFTD behaves atypically compared with well-studied wildlife disease models; this project may result in important breakthroughs in our understanding of wildlife diseases. Conservation outcomes of the project may slow the spread of the disease and in aiding population recovery. Devils are an iconic species with economic benefits for ecotourism and livestock farms, industries which are based in economically depressed rural regions.Read moreRead less
Evolutionary genetics of kin recognition and task specialization in termite societies. Social insects must be able to recognize kin and task specialize in order to maintain colony cohesion and maximize colony labour, respectively. While it is known that kin recognition and task specialization are two key mechanisms underpinning insect societies, the extent to which their expression is mediated by genetic versus environmental variables is not known. This project integrates classic approaches to t ....Evolutionary genetics of kin recognition and task specialization in termite societies. Social insects must be able to recognize kin and task specialize in order to maintain colony cohesion and maximize colony labour, respectively. While it is known that kin recognition and task specialization are two key mechanisms underpinning insect societies, the extent to which their expression is mediated by genetic versus environmental variables is not known. This project integrates classic approaches to the study of animal behaviour with recent advances in molecular genetics to test, for the first time, the role that genetic variables have in mediating kin recognition and task specialization in a major group of social insects, the termites.Read moreRead less
The genetics of resistance to devil facial tumour disease. Tasmanian devils are on the brink of extinction due to a new contagious cancer: Devil Facial Tumour Disease (DFTD). The aim of this project is to determine the genetic nature of DFTD resistance in order to directly contribute to the conservation management of this iconic and ecologically important species. This research will generate fundamental information about genetic diversity in Tasmanian devils and establish the feasibility of bree ....The genetics of resistance to devil facial tumour disease. Tasmanian devils are on the brink of extinction due to a new contagious cancer: Devil Facial Tumour Disease (DFTD). The aim of this project is to determine the genetic nature of DFTD resistance in order to directly contribute to the conservation management of this iconic and ecologically important species. This research will generate fundamental information about genetic diversity in Tasmanian devils and establish the feasibility of breeding resistant animals for release into the wild. Read moreRead less
Epidemiology and pathogenesis of chytridiomycosis in Australian frogs. Strong evidence exists that chytridiomycosis is an introduced disease of amphibians that has caused mass mortality resulting in amphibian population declines and extinctions. Epidemiologic studies will include i) field and experimental studies to determine mortality rates, transmission rates, differences in species susceptibility, and persistence of the pathogen as a saprobe, and ii) molecular epidemiology of fungal strains t ....Epidemiology and pathogenesis of chytridiomycosis in Australian frogs. Strong evidence exists that chytridiomycosis is an introduced disease of amphibians that has caused mass mortality resulting in amphibian population declines and extinctions. Epidemiologic studies will include i) field and experimental studies to determine mortality rates, transmission rates, differences in species susceptibility, and persistence of the pathogen as a saprobe, and ii) molecular epidemiology of fungal strains to examine spread and origin. Pathogenicity studies will be aimed at how chytridiomycosis causes death in frogs. The results will be significant for the conservation of amphibians worldwide and in improving our understanding of diseases in free-living animals.Read moreRead less
Disease in endangered species: The importance of multiple-host infection and spatial structure. Pathogens are increasingly recognised as threats to endangered species. Managing such threats requires models to assess alternative strategies. Most current models deal with a single host and single pathogen, without spatial structure, although multiple-host pathogens pose the greatest conservation threats. This project develops a new generation of spatially-structured multiple-host models, and applie ....Disease in endangered species: The importance of multiple-host infection and spatial structure. Pathogens are increasingly recognised as threats to endangered species. Managing such threats requires models to assess alternative strategies. Most current models deal with a single host and single pathogen, without spatial structure, although multiple-host pathogens pose the greatest conservation threats. This project develops a new generation of spatially-structured multiple-host models, and applies them to two case studies. The first is the chytrid fungus that is thought to have lead to widespread declines and extinctions of frogs in Australia and overseas. The second is birdpox and malaria that have led to the extinction and endangerment of much of Hawaii's endemic avifauna.Read moreRead less
Ancient DNA as a tool to study Australia's paleome: exploring climatic change, past biodiversity, extinctions and long-term survival of DNA. Restoration of Australian ecosystems can only occur if we know what plants, animals and insects used to live in the area before 'pest' species were introduced. This project will use ancient DNA obtained from 'poo' and cave sediments, that is thousands of years old, to discover what species used to live where and when. The ancient DNA profiles of past ecosys ....Ancient DNA as a tool to study Australia's paleome: exploring climatic change, past biodiversity, extinctions and long-term survival of DNA. Restoration of Australian ecosystems can only occur if we know what plants, animals and insects used to live in the area before 'pest' species were introduced. This project will use ancient DNA obtained from 'poo' and cave sediments, that is thousands of years old, to discover what species used to live where and when. The ancient DNA profiles of past ecosystems will allow us to make better decisions when trying to establish sustainable and 'natural' mainland and island sanctuaries. Ancient DNA is well preserved in some dry environments; this project will assess DNA preservation from sites all across Australia and use the DNA sequences to discover information about extinct animals and how past climate changes effected the native biota.Read moreRead less
Bacterial innovation and evolution: Molecular prospecting by targeting integrons and gene cassettes. Bacteria can respond rapidly to environmental change by acquiring new genes via lateral gene transfer. A DNA element called the integron can capture, mobilise and express genes, thereby playing a role in the transfer process. We have discovered that integrons are surprisingly abundant in the environment and are associated with a hitherto unsuspected diversity of novel genes. In this study we will ....Bacterial innovation and evolution: Molecular prospecting by targeting integrons and gene cassettes. Bacteria can respond rapidly to environmental change by acquiring new genes via lateral gene transfer. A DNA element called the integron can capture, mobilise and express genes, thereby playing a role in the transfer process. We have discovered that integrons are surprisingly abundant in the environment and are associated with a hitherto unsuspected diversity of novel genes. In this study we will assess the diversity of environmental integrons and examine their contribution to bacterial evolution. Further, we aim to use integron systems to prospect for novel genes and contract new enzyme pathways by directed evolution.
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Predictive ichthyotoxicity, diagnostics and risk assessment of harmful algal blooms impacting on the Tasmanian salmonid aquaculture industry. We aim to define through a combination of laboratory culture exposure and live cage bioassay experiments the minimum cell concentrations of harmful microalgae (Karenia, Heterosigma, Noctiluca, Chaetoceros) that can cause salmonid mortalities or are a factor in compromising fish health or reducing fish farm productivity. The diagnostic pathology and fish be ....Predictive ichthyotoxicity, diagnostics and risk assessment of harmful algal blooms impacting on the Tasmanian salmonid aquaculture industry. We aim to define through a combination of laboratory culture exposure and live cage bioassay experiments the minimum cell concentrations of harmful microalgae (Karenia, Heterosigma, Noctiluca, Chaetoceros) that can cause salmonid mortalities or are a factor in compromising fish health or reducing fish farm productivity. The diagnostic pathology and fish behaviour caused by different harmful algal taxa will be carefully documented to assist fish health inspectors in the routine diagnosis of algal toxicosis ot compromised fish health. Ultimately, this information will be integrated into a risk assessment strategy for the Tasmanian salmonid industry to manage fish stocks during times of harmful algal bloom events.Read moreRead less