Cultivating numerically significant soil bacteria. The vast majority of soil bacteria have not been able to be studied in the laboratory because they cannot be grown outside the soil. They are therefore termed unculturable. Most of these belong to groups that are completely unstudied. Advances made in the Janssen lab have overcome this impediment to laboratory cultivation of numerically abundant and globally distributed soil bacteria. This project will develop these advances to generate simple a ....Cultivating numerically significant soil bacteria. The vast majority of soil bacteria have not been able to be studied in the laboratory because they cannot be grown outside the soil. They are therefore termed unculturable. Most of these belong to groups that are completely unstudied. Advances made in the Janssen lab have overcome this impediment to laboratory cultivation of numerically abundant and globally distributed soil bacteria. This project will develop these advances to generate simple and widely applicable methods to enable many of the previously unculturable soil bacteria to be studied. This will allow assessments of their ecological roles and biotechnological potentials to be made.Read moreRead less
Dissemination And Virulence Properties Of The She Pathogenicity Island Of Shigella Flexneri.
Funder
National Health and Medical Research Council
Funding Amount
$110,625.00
Summary
Bacterial species belonging to the genus Shigella are responsible for intestinal diseases ranging from mild diarrhoea to life threatening bacillary dysentery. Such diseases kill over a million people, mainly infants in developing countries, every year and lead to serious morbidity and mortality even in industrialised countries with well developed health care systems. In many cases the virulence of Shigella species is augmented by large fragments of DNA, called pathogenicity islands, that carry g ....Bacterial species belonging to the genus Shigella are responsible for intestinal diseases ranging from mild diarrhoea to life threatening bacillary dysentery. Such diseases kill over a million people, mainly infants in developing countries, every year and lead to serious morbidity and mortality even in industrialised countries with well developed health care systems. In many cases the virulence of Shigella species is augmented by large fragments of DNA, called pathogenicity islands, that carry genes which contribute to the development of disease (pathogenesis) in humans. Pathogenicity islands are important genetic elements which appear to spread independantly throughout bacterial populations and therefore contribute to the emergence of new virulence traits in bacteria. Recently, we identified two related pathogenicity islands carried by both Shigella flexneri and other species of the genus Shigella. The two pathogenicity islands belong to a unique class of genetic elements found in Shigella species and virulent strains of the intestinal bacterium E. coli. Our current study is aimed at (1) understanding the mechanisms by which one of these islands, the she pathogenicity island, spreads from one bacterial strain to another to introduce disease-producing or virulence genes to new bacteria and (2) to study how the sigA virulence gene, carried on the she pathogenicity island, contributes to disease development in humans. We know that sigA encodes a protein toxin which contributes to the loss of fluid from the intestines of rabbits that have been experimentally infected with Shigella flexneri. We propose to study the structure and function of the SigA protein to determine how it interacts with tissues to produce a pathological state. Such studies will enhance our understanding of the process of disease development and contribute to the investigation and assessment of new strategies for therapeutic intervention.Read moreRead less
A novel process for removing phosphorus microbiologically from wastewater. Australia is a water limited continent, and its rivers and lakes are priceless assets, but because of climatic conditions, these are especially sensitive to blooms of 'blue green algae'. Some are highly toxic, and water containing them is unsuitable for most purposes. Current technology for P removal requires constructing complex plant configurations, and most of these operate unpredictably and unreliably. This project ....A novel process for removing phosphorus microbiologically from wastewater. Australia is a water limited continent, and its rivers and lakes are priceless assets, but because of climatic conditions, these are especially sensitive to blooms of 'blue green algae'. Some are highly toxic, and water containing them is unsuitable for most purposes. Current technology for P removal requires constructing complex plant configurations, and most of these operate unpredictably and unreliably. This project will develop and fully evaluate a revolutionarily different alternative with a fully aerobic system, capable of being added onto the end of a conventional treatment plant, making protection of rivers and streams simpler and more feasible. Read moreRead less
Biocontrol of foaming in activated sludge plants with bacteriophages. Activated sludge systems are the most widely used processes for treating wastewater in Australia. Yet most eventually suffer from episodes of bulking and foaming, where high levels of biosolids leave the plant with the treated waste, representing serious pollution hazards. Attempts to solve these problems have met with limited success.The highly novel biocontrol method proposed here will provide a specific, environmentally fri ....Biocontrol of foaming in activated sludge plants with bacteriophages. Activated sludge systems are the most widely used processes for treating wastewater in Australia. Yet most eventually suffer from episodes of bulking and foaming, where high levels of biosolids leave the plant with the treated waste, representing serious pollution hazards. Attempts to solve these problems have met with limited success.The highly novel biocontrol method proposed here will provide a specific, environmentally friendly and safe method to protect our rivers, streams and oceans form the harmful consequences of these problemsRead moreRead less
Microbiology of Autothermal Thermophilic Aerobic Digester (ATAD) Systems for Biosolids Disposal in Wastewater Treatment Systems. The disposal of biosolids from wastewater treatment plants is expensive and troublesome. ATAD systems utilise microbes and are claimed to overcome many of the problems of more conventional disposal methods. Two have been installed in plants in central Victoria. However, virtually nothing is known about their microbiology. The study will determine which microbial popula ....Microbiology of Autothermal Thermophilic Aerobic Digester (ATAD) Systems for Biosolids Disposal in Wastewater Treatment Systems. The disposal of biosolids from wastewater treatment plants is expensive and troublesome. ATAD systems utilise microbes and are claimed to overcome many of the problems of more conventional disposal methods. Two have been installed in plants in central Victoria. However, virtually nothing is known about their microbiology. The study will determine which microbial populations are present and responsible for biosolids digestion, how these populations might change with changing operational conditions, and whether these changes in populations relate to production of odors. This information will enable these digesters to be better managed and operated.Read moreRead less
Bacterial communities in metropolitan, rural and indigenous Australians. This project aims to apply recently developed culturing methods to archive and phenotype bacterial species found in the human gut in a representative sample from metropolitan, rural and indigenous Australians. This project expects to isolate, genome sequence, classify, characterize and permanently archive 1500 bacterial species. Expected outcomes of this project include detailed knowledge of previously undiscovered bacteria ....Bacterial communities in metropolitan, rural and indigenous Australians. This project aims to apply recently developed culturing methods to archive and phenotype bacterial species found in the human gut in a representative sample from metropolitan, rural and indigenous Australians. This project expects to isolate, genome sequence, classify, characterize and permanently archive 1500 bacterial species. Expected outcomes of this project include detailed knowledge of previously undiscovered bacterial species, improved methods to measure the bacterial species that inhabit the human gut and a detailed understanding of the gut microbiota of Australians. This project should significantly enhance our knowledge of bacterial diversity and evolution and provide detailed insights into bacterial transmission.Read moreRead less
The host specificity of bacterial pathogens. The vast majority of microorganisms that cause diseases in animals are host specific. In other words, they cause disease exclusively in a particular animal species, but are harmless for others. Despite considerable recent advances in our understanding of the mechanisms used by microorganisms in general to cause disease, in most cases the underlying basis of host-specificity is not known. In this project, we will use two animal pathogens, rabbit-spe ....The host specificity of bacterial pathogens. The vast majority of microorganisms that cause diseases in animals are host specific. In other words, they cause disease exclusively in a particular animal species, but are harmless for others. Despite considerable recent advances in our understanding of the mechanisms used by microorganisms in general to cause disease, in most cases the underlying basis of host-specificity is not known. In this project, we will use two animal pathogens, rabbit-specific enteropathogenic E. coli and the closely related bacterium, Citrobacter rodentium, which specifically infect rabbits and mice respectively, to investigate the molecular basis of host specificity.Read moreRead less
The Relationship Between Maternal And Infant Dietary Intake Of Fermentable Fibre, Gut Microbiota, Short Chain Fatty Acids And Allergic Disease And Asthma: A Population-derived Birth Cohort Study
Funder
National Health and Medical Research Council
Funding Amount
$871,700.00
Summary
The proposed study will involve the Barwon Infant Study (BIS) cohort of 1074 infants to provide the first systematic investigation of the hypotheses that the epidemic of allergic disease and asthma in many parts of the world relates to the paucity of fermentable fibre in the modern diet, and that the protective effect of fermentable fibre is mediated by changes in the organisms that colonise the gut and the metabolites that they produce.
Understanding The Pathogenesis Of Mitochondrial Disease Using IPS Cells
Funder
National Health and Medical Research Council
Funding Amount
$640,372.00
Summary
Induced pluripotent stem (iPS) cells are stem cells derived from adult skin cells that can be converted into cell types such as neurons. iPS cells offer great promise in understanding and treating inherited disorders. However, there are concerns that the “epigenetic memory” of iPS cells has not been completely erased, which may limit the utility of iPS cells. We will evaluate and validate the use of iPS technology in mouse and human models of inherited disorders affecting energy generation.