Cultivating numerically significant soil bacteria. The vast majority of soil bacteria have not been able to be studied in the laboratory because they cannot be grown outside the soil. They are therefore termed unculturable. Most of these belong to groups that are completely unstudied. Advances made in the Janssen lab have overcome this impediment to laboratory cultivation of numerically abundant and globally distributed soil bacteria. This project will develop these advances to generate simple a ....Cultivating numerically significant soil bacteria. The vast majority of soil bacteria have not been able to be studied in the laboratory because they cannot be grown outside the soil. They are therefore termed unculturable. Most of these belong to groups that are completely unstudied. Advances made in the Janssen lab have overcome this impediment to laboratory cultivation of numerically abundant and globally distributed soil bacteria. This project will develop these advances to generate simple and widely applicable methods to enable many of the previously unculturable soil bacteria to be studied. This will allow assessments of their ecological roles and biotechnological potentials to be made.Read moreRead less
A novel process for removing phosphorus microbiologically from wastewater. Australia is a water limited continent, and its rivers and lakes are priceless assets, but because of climatic conditions, these are especially sensitive to blooms of 'blue green algae'. Some are highly toxic, and water containing them is unsuitable for most purposes. Current technology for P removal requires constructing complex plant configurations, and most of these operate unpredictably and unreliably. This project ....A novel process for removing phosphorus microbiologically from wastewater. Australia is a water limited continent, and its rivers and lakes are priceless assets, but because of climatic conditions, these are especially sensitive to blooms of 'blue green algae'. Some are highly toxic, and water containing them is unsuitable for most purposes. Current technology for P removal requires constructing complex plant configurations, and most of these operate unpredictably and unreliably. This project will develop and fully evaluate a revolutionarily different alternative with a fully aerobic system, capable of being added onto the end of a conventional treatment plant, making protection of rivers and streams simpler and more feasible. Read moreRead less
Biocontrol of foaming in activated sludge plants with bacteriophages. Activated sludge systems are the most widely used processes for treating wastewater in Australia. Yet most eventually suffer from episodes of bulking and foaming, where high levels of biosolids leave the plant with the treated waste, representing serious pollution hazards. Attempts to solve these problems have met with limited success.The highly novel biocontrol method proposed here will provide a specific, environmentally fri ....Biocontrol of foaming in activated sludge plants with bacteriophages. Activated sludge systems are the most widely used processes for treating wastewater in Australia. Yet most eventually suffer from episodes of bulking and foaming, where high levels of biosolids leave the plant with the treated waste, representing serious pollution hazards. Attempts to solve these problems have met with limited success.The highly novel biocontrol method proposed here will provide a specific, environmentally friendly and safe method to protect our rivers, streams and oceans form the harmful consequences of these problemsRead moreRead less
Microbiology of Autothermal Thermophilic Aerobic Digester (ATAD) Systems for Biosolids Disposal in Wastewater Treatment Systems. The disposal of biosolids from wastewater treatment plants is expensive and troublesome. ATAD systems utilise microbes and are claimed to overcome many of the problems of more conventional disposal methods. Two have been installed in plants in central Victoria. However, virtually nothing is known about their microbiology. The study will determine which microbial popula ....Microbiology of Autothermal Thermophilic Aerobic Digester (ATAD) Systems for Biosolids Disposal in Wastewater Treatment Systems. The disposal of biosolids from wastewater treatment plants is expensive and troublesome. ATAD systems utilise microbes and are claimed to overcome many of the problems of more conventional disposal methods. Two have been installed in plants in central Victoria. However, virtually nothing is known about their microbiology. The study will determine which microbial populations are present and responsible for biosolids digestion, how these populations might change with changing operational conditions, and whether these changes in populations relate to production of odors. This information will enable these digesters to be better managed and operated.Read moreRead less
Bacterial communities in metropolitan, rural and indigenous Australians. This project aims to apply recently developed culturing methods to archive and phenotype bacterial species found in the human gut in a representative sample from metropolitan, rural and indigenous Australians. This project expects to isolate, genome sequence, classify, characterize and permanently archive 1500 bacterial species. Expected outcomes of this project include detailed knowledge of previously undiscovered bacteria ....Bacterial communities in metropolitan, rural and indigenous Australians. This project aims to apply recently developed culturing methods to archive and phenotype bacterial species found in the human gut in a representative sample from metropolitan, rural and indigenous Australians. This project expects to isolate, genome sequence, classify, characterize and permanently archive 1500 bacterial species. Expected outcomes of this project include detailed knowledge of previously undiscovered bacterial species, improved methods to measure the bacterial species that inhabit the human gut and a detailed understanding of the gut microbiota of Australians. This project should significantly enhance our knowledge of bacterial diversity and evolution and provide detailed insights into bacterial transmission.Read moreRead less
The host specificity of bacterial pathogens. The vast majority of microorganisms that cause diseases in animals are host specific. In other words, they cause disease exclusively in a particular animal species, but are harmless for others. Despite considerable recent advances in our understanding of the mechanisms used by microorganisms in general to cause disease, in most cases the underlying basis of host-specificity is not known. In this project, we will use two animal pathogens, rabbit-spe ....The host specificity of bacterial pathogens. The vast majority of microorganisms that cause diseases in animals are host specific. In other words, they cause disease exclusively in a particular animal species, but are harmless for others. Despite considerable recent advances in our understanding of the mechanisms used by microorganisms in general to cause disease, in most cases the underlying basis of host-specificity is not known. In this project, we will use two animal pathogens, rabbit-specific enteropathogenic E. coli and the closely related bacterium, Citrobacter rodentium, which specifically infect rabbits and mice respectively, to investigate the molecular basis of host specificity.Read moreRead less
How does Clostridium perfringens carry multiple closely related plasmids? The project aims to determine how bacteria are able to replicate and maintain multiple copies of very closely related extrachromosomal elements or plasmids in the same cell. These plasmids are important as they encode toxin genes and antibiotic resistance genes. The project proposes to examine two fundamental hypotheses that are postulated to explain this novel phenomenon. The anticipated outcome of the project is the adva ....How does Clostridium perfringens carry multiple closely related plasmids? The project aims to determine how bacteria are able to replicate and maintain multiple copies of very closely related extrachromosomal elements or plasmids in the same cell. These plasmids are important as they encode toxin genes and antibiotic resistance genes. The project proposes to examine two fundamental hypotheses that are postulated to explain this novel phenomenon. The anticipated outcome of the project is the advancement of fundamental knowledge of how bacteria that cause disease in food-production animals can maintain the genetic elements that enable them to cause these diseases. This would contribute to our understanding of the epidemiology of these economically significant animal pathogens and may support the development of new methods of prevention or treatment.Read moreRead less
Biology and evolution of intracellular parasitism. This project will investigate the development of intracellular parasitism in environmental amoebae. The outcomes of this work will help to understand the mechanisms by which bacteria have evolved to survive inside cells and in some cases cause disease.
Further Genetic and Molecular studies of an Important Prokaryotic Regulator Protein TyrR. Genomes encode many functions whose expression varies dramatically depending on particular cellular environments. Special proteins called Regulator Proteins act as sensors to detect subtle changes in the environment and, in response, to influence the expression of certain genes either dampening them down or stimulating their activity. We are working with the TyrR regulator protein of the simple bacterium E ....Further Genetic and Molecular studies of an Important Prokaryotic Regulator Protein TyrR. Genomes encode many functions whose expression varies dramatically depending on particular cellular environments. Special proteins called Regulator Proteins act as sensors to detect subtle changes in the environment and, in response, to influence the expression of certain genes either dampening them down or stimulating their activity. We are working with the TyrR regulator protein of the simple bacterium Escherichia coli to elucidate the molecular strategies used in these controls. Because this protein controls the expression of a number of genes with diverse functions, evolution has selected equally diverse mechanisms to achieve appropriate transcriptional responses. The detailed knowledge of the E.coli genome and of the various genes regulated by TyrR make it an excellent system for such fundamental studies.Read moreRead less