E. coli as an indicator of faecal contamination in the Australian context. The goal of this research is to improve our ability to use Escherichia coli as an indicator of water quality by determining the extent to which non-faecal sources of E. coli contribute to coliform counts and to develop a method to differentiate non-faecal E. coli from those that are faecal derived.
Biogeochemistry of ferruginous duricrusts. The project is focussed on the examination and application of microbial iron cycling in the formation of geologically stable, iron duricrusts in tropical regimes. The aim of the project is to develop a site-scale bioremediation strategy for iron ore mines by re-establishing canga, which are ‘ancient’ distinct ecosystems possessing unique plant species rarely found on Earth. This university-industry collaboration aims to produce economic benefits for the ....Biogeochemistry of ferruginous duricrusts. The project is focussed on the examination and application of microbial iron cycling in the formation of geologically stable, iron duricrusts in tropical regimes. The aim of the project is to develop a site-scale bioremediation strategy for iron ore mines by re-establishing canga, which are ‘ancient’ distinct ecosystems possessing unique plant species rarely found on Earth. This university-industry collaboration aims to produce economic benefits for the world’s iron mining industry through advanced training in mining-related research, and through the completion of the mining life cycle by site remediation, enhancing Australia’s position as a global leader in providing innovative solutions to today’s mining challenges.Read moreRead less
TraitCapture: Genomic modelling for plant phenomics under environmental stress. This project aims to develop software to integrate new hyper-spectral and 3D growth models of plant phenomics with population genomics to identify heritable developmental traits across varied environments. Genome wide association studies aim to then be used to identify causal genes. Functional structural plant models incorporating genetic variation will be used to predict growth under simulated stress environments. ....TraitCapture: Genomic modelling for plant phenomics under environmental stress. This project aims to develop software to integrate new hyper-spectral and 3D growth models of plant phenomics with population genomics to identify heritable developmental traits across varied environments. Genome wide association studies aim to then be used to identify causal genes. Functional structural plant models incorporating genetic variation will be used to predict growth under simulated stress environments. The research team unites international industry, the Australian Plant Phenomics Facility, and university statistical geneticists. TraitCapture software will use open standards applicable to both controlled and field environments enabling plant breeders to pre-select adaptive traits to increase crop productivity under environmental stress.Read moreRead less
Sino-Australian neurogenetics initiative. This project will undertake large population studies to identify genes that are associated with motor neuron disease, schizophrenia and intracranial haemorrhage. The project will determine genetic markers, aid development of diagnostic tools and identify new therapeutic targets for these common heritable neurological diseases.
Digging deeper to improve yield stability. This project aims to provide innovative breeding solutions that harness the ‘hidden’ part of the plant, roots, to support the development of more productive crops in the face of climate variability. The project expects to generate new insights into the biology and genetics of root development in barley, a model cereal crop, by applying cutting-edge genome editing, phenotyping and genomics technologies. Anticipated outcomes include novel methodologies to ....Digging deeper to improve yield stability. This project aims to provide innovative breeding solutions that harness the ‘hidden’ part of the plant, roots, to support the development of more productive crops in the face of climate variability. The project expects to generate new insights into the biology and genetics of root development in barley, a model cereal crop, by applying cutting-edge genome editing, phenotyping and genomics technologies. Anticipated outcomes include novel methodologies to accelerate breeding for diverse production environments, with direct applications in barley, and other major cereals including wheat and oats. This should provide significant economic and social benefits to the Australian grains industry through yield stability amidst climate variability.Read moreRead less
Understanding the koala microbiome: unlocking the secrets of koala health and dietary specialisation, and successful husbandry and translocation. This project aims to discover how the composition and function of koala gastrointestinal microbial communities differ in space and time in response to the varying nutritional quality and chemical composition of koala diets. Using detailed chemical analysis, cutting edge metagenomic and bioinformatic pipelines and powerful approaches to study enzyme fun ....Understanding the koala microbiome: unlocking the secrets of koala health and dietary specialisation, and successful husbandry and translocation. This project aims to discover how the composition and function of koala gastrointestinal microbial communities differ in space and time in response to the varying nutritional quality and chemical composition of koala diets. Using detailed chemical analysis, cutting edge metagenomic and bioinformatic pipelines and powerful approaches to study enzyme functions in the koala’s gut, the investigators aims to reveal the role of microbes in detoxification of plant toxins and degradation of recalcitrant fibre fractions. The outcomes aim to facilitate the use of faecal transplants to improve digestive function for translocated and rehabilitated koalas, enhancing options for koala management and conservation.Read moreRead less
Enabling Molecular Plant Breeding for Drought Adaptation Using Genome-to-Phenome Modelling Technologies. Effective molecular plant breeding for improved water productivity of sorghum would generate significant economic and social benefits for rural communities in NE Australia. There is a significant opportunity to expand the sorghum industry in the region. Despite the global financial crisis, global demand for meat continues to increase, generating strong demand from intensive livestock industri ....Enabling Molecular Plant Breeding for Drought Adaptation Using Genome-to-Phenome Modelling Technologies. Effective molecular plant breeding for improved water productivity of sorghum would generate significant economic and social benefits for rural communities in NE Australia. There is a significant opportunity to expand the sorghum industry in the region. Despite the global financial crisis, global demand for meat continues to increase, generating strong demand from intensive livestock industries for feed grain. Price is projected to return to high levels given continuing use of major feed grains for biofuel. A 10% increase in sorghum production would add net value of $48M annually, much via employment. The scientific content of this project positions Australia at the leading edge globally in this emerging research field. Read moreRead less
Smart management of disinfectant in chloraminated water-supply systems. Smart management of disinfectant in chloraminated water-supply systems. This project aims to develop an adaptive, real-time control system for managing disinfectant residuals in chloraminated water supply systems. While chloramine delivers microbiologically safe drinking water in warmer climates and in long distribution systems, it is largely unpredictable, costs water utilities millions of dollars annually, and has uncertai ....Smart management of disinfectant in chloraminated water-supply systems. Smart management of disinfectant in chloraminated water-supply systems. This project aims to develop an adaptive, real-time control system for managing disinfectant residuals in chloraminated water supply systems. While chloramine delivers microbiologically safe drinking water in warmer climates and in long distribution systems, it is largely unpredictable, costs water utilities millions of dollars annually, and has uncertain benefits. This project’s control system will be guided by quantitative models formulated from multi-pronged, fundamental experiments. The project will quantify microbial chloramine decay and determine mechanisms to increase predictability. The project will develop and demonstrate a real-time control technology which delivered microbiologically safe, cost-efficient drinking water to people in warmer climates, despite warming climate and increasing population.Read moreRead less
Establishing the provenance of Torres Strait Islander remains: genetics, craniometrics and isotopes. The repatriation of Aboriginal and Torres Strait Islander remains has been a focus of Commonwealth and State Governments for over two decades. It remains as a significant social and cultural issue for many Indigenous Australians. One of the main hurdles to repatriation is the fact that hundreds, and possibly thousands of human remains have very little contextual detail associated with them. A num ....Establishing the provenance of Torres Strait Islander remains: genetics, craniometrics and isotopes. The repatriation of Aboriginal and Torres Strait Islander remains has been a focus of Commonwealth and State Governments for over two decades. It remains as a significant social and cultural issue for many Indigenous Australians. One of the main hurdles to repatriation is the fact that hundreds, and possibly thousands of human remains have very little contextual detail associated with them. A number of techniques have been developed in the field of biological anthropology to reconstruct the history of individual skeletal remains. This innovative project aims to use advances in the fields of ancient DNA, isotope analysis and craniometrics to resolve the provenance of 113 trophy skulls from the Torres Strait Islands.Read moreRead less
Collaborative science for monitoring of Northern Territory marine megafauna. The project’s aim is to map population connectivity and critical habitat for coastal marine megafauna in remote northern Australian waters, providing a more informed scientific base for biodiversity monitoring and management. The project will employ cutting edge methods in genetics and movement ecology and unite Indigenous rangers with marine national park managers and scientists. Expected outcomes include enhanced capa ....Collaborative science for monitoring of Northern Territory marine megafauna. The project’s aim is to map population connectivity and critical habitat for coastal marine megafauna in remote northern Australian waters, providing a more informed scientific base for biodiversity monitoring and management. The project will employ cutting edge methods in genetics and movement ecology and unite Indigenous rangers with marine national park managers and scientists. Expected outcomes include enhanced capacity for monitoring and conservation planning and new partnerships that will improve research capacity in remote environments. Benefits include environmental management led by Indigenous Traditional Owners, sea rangers and marine park managers, and conservation benefits to coastal dolphin and sea turtle species.Read moreRead less