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Digging deeper to improve yield stability. This project aims to provide innovative breeding solutions that harness the ‘hidden’ part of the plant, roots, to support the development of more productive crops in the face of climate variability. The project expects to generate new insights into the biology and genetics of root development in barley, a model cereal crop, by applying cutting-edge genome editing, phenotyping and genomics technologies. Anticipated outcomes include novel methodologies to ....Digging deeper to improve yield stability. This project aims to provide innovative breeding solutions that harness the ‘hidden’ part of the plant, roots, to support the development of more productive crops in the face of climate variability. The project expects to generate new insights into the biology and genetics of root development in barley, a model cereal crop, by applying cutting-edge genome editing, phenotyping and genomics technologies. Anticipated outcomes include novel methodologies to accelerate breeding for diverse production environments, with direct applications in barley, and other major cereals including wheat and oats. This should provide significant economic and social benefits to the Australian grains industry through yield stability amidst climate variability.Read moreRead less
Factors causing wheat stripe rust epidemics. This project aims to tackle wheat stripe rust, one of the most important fungal diseases of wheat in Australia, causing losses of up to $125 million a year. This project expects to gain insights into the fungal evolution and the molecular mechanism that causes hyper-virulent pathogen isolates. The expected outcome is to identify and characterise multiple genetic factors in the pathogen that contribute to wheat stripe rust epidemics in Australia. This ....Factors causing wheat stripe rust epidemics. This project aims to tackle wheat stripe rust, one of the most important fungal diseases of wheat in Australia, causing losses of up to $125 million a year. This project expects to gain insights into the fungal evolution and the molecular mechanism that causes hyper-virulent pathogen isolates. The expected outcome is to identify and characterise multiple genetic factors in the pathogen that contribute to wheat stripe rust epidemics in Australia. This project will contribute to improved disease management strategies to contain wheat stripe rust, resulting in higher wheat yields, reduced application of fungicides and increased revenue for Australian wheat farmers.Read moreRead less
Genome evolution & adaptation of the multinuclear wheat stripe rust fungus. Animals and plants package their genomes into a single nucleus within each cell. In contrast, millions of fungal species accommodate multiple nuclei containing individual haploid genomes. It is currently unknown what the evolutionary implications are for this unusual genome division into multiple nuclei. Here we explore the evolutionary consequences of genome division into multiple nuclei for the first time by applying c ....Genome evolution & adaptation of the multinuclear wheat stripe rust fungus. Animals and plants package their genomes into a single nucleus within each cell. In contrast, millions of fungal species accommodate multiple nuclei containing individual haploid genomes. It is currently unknown what the evolutionary implications are for this unusual genome division into multiple nuclei. Here we explore the evolutionary consequences of genome division into multiple nuclei for the first time by applying cutting edge genome biology tools and algorithms. The economically significant study system is the devastating wheat stripe rust fungus. This pathogen costs Australian farmers over $100 million a year. New understanding is expected to lead to better disease management, reduced fungicide applications, and increased yields.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE170100151
Funder
Australian Research Council
Funding Amount
$372,000.00
Summary
Enhancing resistance to wheat stripe rust disease. This project aims to investigate why wheat succumbs to stripe rust fungus, a grave threat to global wheat production. Wheat is the primary agricultural and revenue crop of Australia, cultivated since early European settlement. Severe disease epidemics arise when the fast evolving rust pathogen breaks down host plant genetic resistance. This project will investigate the molecular mechanisms of host-pathogen recognition and the consequences of pat ....Enhancing resistance to wheat stripe rust disease. This project aims to investigate why wheat succumbs to stripe rust fungus, a grave threat to global wheat production. Wheat is the primary agricultural and revenue crop of Australia, cultivated since early European settlement. Severe disease epidemics arise when the fast evolving rust pathogen breaks down host plant genetic resistance. This project will investigate the molecular mechanisms of host-pathogen recognition and the consequences of pathogen variation to determine the causes of resistance breakdown. The expected outcome is robust rust-resistant wheat cultivars to maintain global food security.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE190100066
Funder
Australian Research Council
Funding Amount
$362,000.00
Summary
Uncovering how rust fungi cause devastating plant diseases. This project aims to generate a new understanding of how rust fungi infect plant cells using single-cell sequencing technologies and data-driven investigations. This project expects to discover conserved rust infection strategies and the first characterisations of mechanisms that transfer virulence proteins from the fungus to the plant. Innovations and new knowledge from this project will be of high-impact and of benefit to the Australi ....Uncovering how rust fungi cause devastating plant diseases. This project aims to generate a new understanding of how rust fungi infect plant cells using single-cell sequencing technologies and data-driven investigations. This project expects to discover conserved rust infection strategies and the first characterisations of mechanisms that transfer virulence proteins from the fungus to the plant. Innovations and new knowledge from this project will be of high-impact and of benefit to the Australian and international community through knowledge discovery about conserved rust infection mechanisms. This project expects to deliver strategies for effective rust disease management that will in the future lessen the impact of rust diseases on agriculture and natural ecosystems in Australia.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE120101127
Funder
Australian Research Council
Funding Amount
$375,000.00
Summary
An integrated statistical genetics framework for breeding superior wheat varieties. Genetic studies in agriculture are rapidly increasing in size and complexity in pursuit of genes behind desirable traits such as yield and water use efficiency. This project will address the need for efficient statistical methods to analyse genetic data and thus enable production of wheat varieties that will contribute to Australian food security.
Investigating a new paradigm for plant-pathogen interactions; Identification of host-selective toxin proteins in the wheat pathogen Stagonospora nodorum. Stagonospora nodorum is a fungus that causes leaf and glume blotch disease on wheat. This disease alone causes $55 million dollars in yield losses per annum. Traditional breeding methods have yielded crops that are only mildly resistant leaving control of the disease to be worryingly reliant on fungicides. This project aims to identify and char ....Investigating a new paradigm for plant-pathogen interactions; Identification of host-selective toxin proteins in the wheat pathogen Stagonospora nodorum. Stagonospora nodorum is a fungus that causes leaf and glume blotch disease on wheat. This disease alone causes $55 million dollars in yield losses per annum. Traditional breeding methods have yielded crops that are only mildly resistant leaving control of the disease to be worryingly reliant on fungicides. This project aims to identify and characterise proteins that the fungus secretes to cause disease on wheat. By identifying these proteins, it is anticipated that strategies, both traditional and modern, could be employed to enable better control of the disease. This in turn would help provide a long term and secure supply of wheat and wheat based products to the community.Read moreRead less
Long noncoding RNAs and their regulatory roles in epigenetic control of gene expression in plants. Epigenetic control of gene expression plays a critical role in development, environmental adaptation, stress response and disease resistance in plants, but its molecular basis remains largely unknown. The proposed study should contribute to the emerging field of epigenetics by discovering new regulatory noncoding RNAs involved in epigenetic mechanisms in plants. These new discoveries could potentia ....Long noncoding RNAs and their regulatory roles in epigenetic control of gene expression in plants. Epigenetic control of gene expression plays a critical role in development, environmental adaptation, stress response and disease resistance in plants, but its molecular basis remains largely unknown. The proposed study should contribute to the emerging field of epigenetics by discovering new regulatory noncoding RNAs involved in epigenetic mechanisms in plants. These new discoveries could potentially provide new opportunities and platforms for improving the performance, yield and quality of crop plants. The proposed study is therefore consistent with the national research priority goals such as breakthrough science, frontier technologies and promoting an innovation culture.Read moreRead less
Functional characterisation of the necrotrophic effector proteins Tox1 and Tox3 from the wheat pathogen Stagonospora nodorum. Fungal pathogens cost the Australian agricultural industry over one billion dollars per year. This project will build upon recent key advances to provide a fundamental basis on how fungal pathogens cause disease. The results from this study will promote future advances in disease management with the aim of securing Australian wheat supplies.
Isolation and functional characterisation of a pathogen meta effector able to inhibit detection of multiple disease effectors by resistant plants. The rust fungi are a major economic threat to crop production in Australia. This project will investigate the molecular mechanism used by a rust fungus to prevent detection of multiple disease-inducing proteins by resistant plants and generate knowledge that will lead to the development of new and more effective disease control strategies.