The molecular pathogenesis of Equine rhinitis A virus, a major respiratory pathogen of horses. The equine industry in Australia is worth $15 billion a year. Equine respiratory disease costs Victoria, alone, $5-10 million per year. Equine rhinitis A virus is a major cause of acute febrile respiratory disease in horses. This project aims to develop an infectious clone to study the pathogenesis of the disease, and subunit antigens for use as vaccines. These reagents will increase our understand ....The molecular pathogenesis of Equine rhinitis A virus, a major respiratory pathogen of horses. The equine industry in Australia is worth $15 billion a year. Equine respiratory disease costs Victoria, alone, $5-10 million per year. Equine rhinitis A virus is a major cause of acute febrile respiratory disease in horses. This project aims to develop an infectious clone to study the pathogenesis of the disease, and subunit antigens for use as vaccines. These reagents will increase our understanding of the pathogenesis of ERAV and will lead to experimental vaccines which will be tested in horses.Read moreRead less
Kernel methods for the analysis of whole bacterial genomes. This project addresses the fundamental scientific problem of the identification of regulatory regions and specific promoters within bacterial genomes, with a focus upon two organisms of great social, economic and bioterrism significance. From the machine learning perspective, the project will be the first to produce a kernel-based approach directly tailored to the problem of the detection of regulatory regions. The methods developed wil ....Kernel methods for the analysis of whole bacterial genomes. This project addresses the fundamental scientific problem of the identification of regulatory regions and specific promoters within bacterial genomes, with a focus upon two organisms of great social, economic and bioterrism significance. From the machine learning perspective, the project will be the first to produce a kernel-based approach directly tailored to the problem of the detection of regulatory regions. The methods developed will be made available through a straightforward web-based interface, allowing biologists throughout the world to utilize the approach as a tool to be applied to a progressively widening class of bacterial genomes, and even to eukaryotes. Read moreRead less
Bacterial mechanisms of gold mobilisation and precipitation with applications to mineral processing and exploration. The development of a comprehensive model for the biogeochemical behaviour of gold in the environment will aid mineral explorers to interpret existing exploration data and to develop better exploration strategies. Moreover, this project aims to develop the basis for a new geomicrobiological gold exploration method by identifying organisms and microbial gene sequences that could be ....Bacterial mechanisms of gold mobilisation and precipitation with applications to mineral processing and exploration. The development of a comprehensive model for the biogeochemical behaviour of gold in the environment will aid mineral explorers to interpret existing exploration data and to develop better exploration strategies. Moreover, this project aims to develop the basis for a new geomicrobiological gold exploration method by identifying organisms and microbial gene sequences that could be used as biomarkers for mineralisation. This research will also provide the fundamental information required to copy nature and engineer new cost-efficient and environmentally friendly technologies for gold processing using microorganisms that occur naturally in Australian soils. Read moreRead less
Bacterial poly-histidine triad proteins. The poly-histidine triad (Pht) proteins are a poorly characterised family of surface proteins expressed by the genus Streptococcus and other Gram-positive genera. Recent studies suggest an important role for Pht proteins in survival of these bacteria in low zinc (Zn) environments. The project hypothesis is that Pht proteins specifically recruit Zn from the extracellular environment and somehow make it available to ATP binding cassette (ABC) transport syst ....Bacterial poly-histidine triad proteins. The poly-histidine triad (Pht) proteins are a poorly characterised family of surface proteins expressed by the genus Streptococcus and other Gram-positive genera. Recent studies suggest an important role for Pht proteins in survival of these bacteria in low zinc (Zn) environments. The project hypothesis is that Pht proteins specifically recruit Zn from the extracellular environment and somehow make it available to ATP binding cassette (ABC) transport systems located in the bacterial plasma membrane, beneath the cell wall, facilitating Zn uptake by the bacterium. The aim of this project is to conduct comprehensive molecular characterization of the interactions between Pht proteins, Zn and ABC transporters, and the role of the histidine triad motifs in these interactions.Read moreRead less
Metagenomics and the genetic basis of ecology and evolution of communities - complex microbial communities in industrial processes as excellent paradigms. Benefits accrue on two fronts: the international reputation of Australian science in contributing significantly to two new, challenging and highly topical questions in ecology and evolution, and in pioneering a route to better efficiency and control of an important industrial process. Wastewater is rich in organic phosphorus that is damaging t ....Metagenomics and the genetic basis of ecology and evolution of communities - complex microbial communities in industrial processes as excellent paradigms. Benefits accrue on two fronts: the international reputation of Australian science in contributing significantly to two new, challenging and highly topical questions in ecology and evolution, and in pioneering a route to better efficiency and control of an important industrial process. Wastewater is rich in organic phosphorus that is damaging to the environment if untreated, but current understanding enables only rudimentary control of the microbial communities that are the basis of the treatment process. The work will provide unprecedented insight into the mechanisms underpinning the dynamics of phosphorus absorbing microbes in industrial facilities by integrating from gene-to-ecosystem.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE120101730
Funder
Australian Research Council
Funding Amount
$375,000.00
Summary
Targeting cell death pathways in parasites. Schistosomiasis is a disease caused by parasitic worms. Due to the potential for drug resistance, new drugs are needed. This project aims to identify the components needed for parasite survival based on a cell death pathway in schistosomes. Neutralising the activities of these proteins should cause parasite death, providing a new treatment strategy.
EXTRACELLULAR ELECTRON TRANSFER IN BIO-ELECTROCHEMICAL SYSTEMS. Water quality and supply are critical issues in Australia. This project investigates the role of bacteria in maintaining a good freshwater quality, and the influence of environmental parameters on this. It will enable us to assess the role of bacteria on greenhouse gas emissions in a variety of environments. As a result, processes can be developed to alleviate high emissions while simultaneously producing green energy. The proteomic ....EXTRACELLULAR ELECTRON TRANSFER IN BIO-ELECTROCHEMICAL SYSTEMS. Water quality and supply are critical issues in Australia. This project investigates the role of bacteria in maintaining a good freshwater quality, and the influence of environmental parameters on this. It will enable us to assess the role of bacteria on greenhouse gas emissions in a variety of environments. As a result, processes can be developed to alleviate high emissions while simultaneously producing green energy. The proteomics study will deliver, aside from knowledge, redox proteins which find their way to diagnostics and fuel cells. This project substantiates Australia based research at the forefront and enables international anchoring of our expertise.Read moreRead less
Molecular characterisation of hypervirulence and the infectious cycle in Clostridium difficile. Gut diseases caused by the bacterium Clostridium difficile are a significant animal and public health problem in Australia and many other countries. This project will allow us to understand how this bacterium causes disease, leading to the development of much needed preventative and treatment strategies for animals and human patients.
Understanding the dynamics of malaria infection. Malaria infection kills around one million patients each year and this project involves an interdisciplinary team who will directly measure how the parasite grows and is killed by the immune system. A better understanding of parasite growth and control will help develop better drugs therapy and vaccination for this important infection.
Function and application of novel proteins from sponge symbionts. This project aims to determine the function of eukaryotic-like proteins (ELPs) from bacterial symbionts of sponges and apply this knowledge to develop new tools for biotechnology. This project will use innovative microscopy techniques and gene expression studies to define the molecular and cellular interactions of ELPs with sponges and how this is influenced by changing environmental conditions. ELPs will be further used to create ....Function and application of novel proteins from sponge symbionts. This project aims to determine the function of eukaryotic-like proteins (ELPs) from bacterial symbionts of sponges and apply this knowledge to develop new tools for biotechnology. This project will use innovative microscopy techniques and gene expression studies to define the molecular and cellular interactions of ELPs with sponges and how this is influenced by changing environmental conditions. ELPs will be further used to create new, artificial interactions between bacteria and eukaryotes. This project will provide fundamental knowledge on the evolution and function of newly discovered ELPs found in both beneficial and pathogenic bacteria and paves the way to control symbiosis for biotechnological applications.Read moreRead less