Breaking critical barriers in soil formation of bauxite residues . Conventional methods of bauxite residue rehabilitation require expensive and unsustainable covering topsoil. Building on recent breakthroughs in eco-engineering tailings into soil, the project aims to develop a field-based technology using marine microbes and halophytic plants to accelerate in-situ soil formation from bauxite residues (incl seawater neutralised bauxite residues) under field conditions. The technology will be unde ....Breaking critical barriers in soil formation of bauxite residues . Conventional methods of bauxite residue rehabilitation require expensive and unsustainable covering topsoil. Building on recent breakthroughs in eco-engineering tailings into soil, the project aims to develop a field-based technology using marine microbes and halophytic plants to accelerate in-situ soil formation from bauxite residues (incl seawater neutralised bauxite residues) under field conditions. The technology will be underpinned by understanding the roles of marine microbe consortia and eco-engineering inputs in accelerating key mineralogical, geochemical, physical and biological changes in bauxite residues. This technology is expected to be transferable and adaptable across other alumina refineries in Australia.Read moreRead less
Accelerated tailings remediation with plant and microbial biotechnologies. The Australian alumina industry produces 32 million tonnes of bauxite residue (alumina refining tailings) each year, most of which is stored in perpetuity in landfill-type tailings storage facilities. The high pH, high salinity, lack of plant nutrients, and poor physical properties of bauxite residue are major barriers to safe storage and successful closure of tailings storage facilities. Existing remediation approaches a ....Accelerated tailings remediation with plant and microbial biotechnologies. The Australian alumina industry produces 32 million tonnes of bauxite residue (alumina refining tailings) each year, most of which is stored in perpetuity in landfill-type tailings storage facilities. The high pH, high salinity, lack of plant nutrients, and poor physical properties of bauxite residue are major barriers to safe storage and successful closure of tailings storage facilities. Existing remediation approaches are expensive, slow, and often ineffective. We will deliver new microbial- and plant-driven biotechnologies for rapid, cost-effective remediation of bauxite residue. This will enable safe, sustainable closure of storage facilities, and safeguard the strong contribution of this $15 billion industry to Australia's economy. Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE200100884
Funder
Australian Research Council
Funding Amount
$426,691.00
Summary
Do novel diets reshape wildlife microbiomes and resilience to stressors? This project aims to investigate how bacteria can assist wildlife in adapting to the accelerating threat of environmental change. Using an innovative, interdisciplinary approach this project expects to identify interactions between environmental change and the diet, microbial communities and stress resilience of wildlife, using the threatened Grey-headed flying fox as a model system. Expected outcomes include detailed under ....Do novel diets reshape wildlife microbiomes and resilience to stressors? This project aims to investigate how bacteria can assist wildlife in adapting to the accelerating threat of environmental change. Using an innovative, interdisciplinary approach this project expects to identify interactions between environmental change and the diet, microbial communities and stress resilience of wildlife, using the threatened Grey-headed flying fox as a model system. Expected outcomes include detailed understanding of the role of microbial communities in shaping wildlife adaptations and development of ecological interventions to enhance wildlife resilience in Australia and globally. Such outcomes may reveal opportunities for management strategies that safeguard threatened species and reduce human-wildlife conflicts.Read moreRead less
Biogeochemical remediation approaches for PFAS contaminated environments. This project aims to identify and harvest microorganisms capable of directly or indirectly affecting PFOS or PFOA degradation in the environment. Fluorinated compounds such as PFOS and PFOA in firefighting foams are contaminants of concern now routinely detected in contaminated groundwater and soil globally. Understanding the role of microorganisms, and the biogeochemical processes they perform in relation to fluorinated c ....Biogeochemical remediation approaches for PFAS contaminated environments. This project aims to identify and harvest microorganisms capable of directly or indirectly affecting PFOS or PFOA degradation in the environment. Fluorinated compounds such as PFOS and PFOA in firefighting foams are contaminants of concern now routinely detected in contaminated groundwater and soil globally. Understanding the role of microorganisms, and the biogeochemical processes they perform in relation to fluorinated compounds, will inform handling of contaminated sites and lead to development of cost effective and sustainable remediation technologies. Read moreRead less
Coastal permeable sediments as a novel source of greenhouse gases. Emissions of the greenhouse gases nitrous oxide and methane are increasing from unknown sources. High concentrations of these gases have been observed in coastal waters which bear the brunt of nutrient pollution (primarily nitrogen) from cities and agriculture. This project aims to investigate the sources of these gases within these environments and the processes that lead to their formation. This new knowledge is expected to ....Coastal permeable sediments as a novel source of greenhouse gases. Emissions of the greenhouse gases nitrous oxide and methane are increasing from unknown sources. High concentrations of these gases have been observed in coastal waters which bear the brunt of nutrient pollution (primarily nitrogen) from cities and agriculture. This project aims to investigate the sources of these gases within these environments and the processes that lead to their formation. This new knowledge is expected to develop new models which aim to enable us to better predict the emissions of greenhouse gases within coastal waters. Expected benefit of this will be strategies to reduce greenhouse gas emissions.Read moreRead less
Deciphering the coral minimal microbiome. This project aims to decipher the functions of coral-associated bacteria by taking advantage of low-diversity microbiomes that are naturally found in some coral species. A further aim is to unveil the importance of bacterial genome evolution in coral adaptation to climate change. Climate warming is the biggest threat to coral reefs with half of Australia’s Great Barrier Reef (GBR) corals dead due to recent summer heat waves. Expected outcomes are an incr ....Deciphering the coral minimal microbiome. This project aims to decipher the functions of coral-associated bacteria by taking advantage of low-diversity microbiomes that are naturally found in some coral species. A further aim is to unveil the importance of bacterial genome evolution in coral adaptation to climate change. Climate warming is the biggest threat to coral reefs with half of Australia’s Great Barrier Reef (GBR) corals dead due to recent summer heat waves. Expected outcomes are an increased understanding of how bacteria contribute to coral heat tolerance, and new knowledge to assist in the development of bacterial probiotics for enhancing coral thermal tolerance. This should provide significant benefits to the protection of the GBR and Australia’s economy.Read moreRead less
The adaptive evolution of key methane-utilising microorganisms. This project aims to characterise the evolutionary adaptations of a group of microorganisms with a key role in mitigating the release of methane into the atmosphere. Innovative molecular and visualisation-based approaches will be applied to uncover their metabolic diversity and evolutionary history. An important outcome of this study will be the comprehensive understanding of the contribution and impact these microorganisms have on ....The adaptive evolution of key methane-utilising microorganisms. This project aims to characterise the evolutionary adaptations of a group of microorganisms with a key role in mitigating the release of methane into the atmosphere. Innovative molecular and visualisation-based approaches will be applied to uncover their metabolic diversity and evolutionary history. An important outcome of this study will be the comprehensive understanding of the contribution and impact these microorganisms have on the global carbon cycle, which will importantly inform accurate climate change models. This has clear benefits for society, given the precision of such models is essential in our ability to minimise the impact and associated cost of global warming.Read moreRead less
Bacterial communities in metropolitan, rural and indigenous Australians. This project aims to apply recently developed culturing methods to archive and phenotype bacterial species found in the human gut in a representative sample from metropolitan, rural and indigenous Australians. This project expects to isolate, genome sequence, classify, characterize and permanently archive 1500 bacterial species. Expected outcomes of this project include detailed knowledge of previously undiscovered bacteria ....Bacterial communities in metropolitan, rural and indigenous Australians. This project aims to apply recently developed culturing methods to archive and phenotype bacterial species found in the human gut in a representative sample from metropolitan, rural and indigenous Australians. This project expects to isolate, genome sequence, classify, characterize and permanently archive 1500 bacterial species. Expected outcomes of this project include detailed knowledge of previously undiscovered bacterial species, improved methods to measure the bacterial species that inhabit the human gut and a detailed understanding of the gut microbiota of Australians. This project should significantly enhance our knowledge of bacterial diversity and evolution and provide detailed insights into bacterial transmission.Read moreRead less
Uncovering new microbial players and processes in the global methane cycle. This project aims to utilise multiple analytical strategies (including metagenomics and metatranscriptomics) to substantially expand our understanding of the key microorganisms, metabolic strategies, and interspecies relationships involved in the formation and consumption of methane. The global methane cycle is controlled by microorganisms that produce and consume this important greenhouse gas, however it is now recognis ....Uncovering new microbial players and processes in the global methane cycle. This project aims to utilise multiple analytical strategies (including metagenomics and metatranscriptomics) to substantially expand our understanding of the key microorganisms, metabolic strategies, and interspecies relationships involved in the formation and consumption of methane. The global methane cycle is controlled by microorganisms that produce and consume this important greenhouse gas, however it is now recognised that there are many as-yet undiscovered methane-metabolising microorganisms in the environment. The project will lead to a greater understanding of the contribution of these novel microorganisms to global carbon cycling and their links to climate change. This will directly benefit modelling efforts to understand future climate change scenarios.Read moreRead less
Illuminating the microbial world using genome-based fluorescence microscopy. Our understanding of microbial diversity on Earth has been fundamentally changed by metagenomic characterisation of natural ecosystems. Traditional approaches for visualising microbial communities are time-consuming and provide limited information about the identity of specific microorganisms. The proposed research aims to combine single cell genomics and super resolution microscopy for novel, high-throughput, genome-b ....Illuminating the microbial world using genome-based fluorescence microscopy. Our understanding of microbial diversity on Earth has been fundamentally changed by metagenomic characterisation of natural ecosystems. Traditional approaches for visualising microbial communities are time-consuming and provide limited information about the identity of specific microorganisms. The proposed research aims to combine single cell genomics and super resolution microscopy for novel, high-throughput, genome-based techniques to visualise microorganisms, plasmids and viruses, with strain level specificity. The application of these highly scalable approaches will provide comprehensive and unprecedented insight into the fine-scale dynamics and evolution of environmentally and biotechnologically important microbial communities.Read moreRead less