Root-to-shoot: modeling the salt stress response of a plant vascular system. Salt and drought are the two major abiotic stresses affecting crop plant health, growth and development. We aim to understand salt and water transport in plants and the physiological effects of soil salinity. Using biophysical models, we will quantify the movement of salt through plant organs, tissues and cells, from root to leaf. We aim to answer the question of how salt moves across the different tissues and major org ....Root-to-shoot: modeling the salt stress response of a plant vascular system. Salt and drought are the two major abiotic stresses affecting crop plant health, growth and development. We aim to understand salt and water transport in plants and the physiological effects of soil salinity. Using biophysical models, we will quantify the movement of salt through plant organs, tissues and cells, from root to leaf. We aim to answer the question of how salt moves across the different tissues and major organs, how salt accumulates in root, leaf and shoot cells, and how movement and accumulation is controlled by the diversity of transport mechanisms operating in plants. We aim to quantify tissue tolerance, osmotic tolerance and ionic tolerance and discover new mechanisms by which plants can stave off the effect of salt stress.Read moreRead less
New mathematics for lipids and cells: structured models for atherosclerosis. The project aims to create new mathematical theory for immune cell behaviour which leads to heart attacks and strokes. This includes formulation and analysis of new types of mathematical models for atherosclerotic plaque development, leading to the creation of new mathematical tools to investigate cell fate in plaques and to generate new hypotheses for experimental research. Expected outcomes of this project include po ....New mathematics for lipids and cells: structured models for atherosclerosis. The project aims to create new mathematical theory for immune cell behaviour which leads to heart attacks and strokes. This includes formulation and analysis of new types of mathematical models for atherosclerotic plaque development, leading to the creation of new mathematical tools to investigate cell fate in plaques and to generate new hypotheses for experimental research. Expected outcomes of this project include powerful and reliable mathematical models ready for application, and national and international collaborations with scientists and mathematicians. This should provide significant benefits including increased capacity to use mathematical models in vascular biology and training young researchers in interdisciplinary methods.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE130100031
Funder
Australian Research Council
Funding Amount
$333,684.00
Summary
Mathematical modelling of the complex mechanics of biological materials and their role in tissue function and development. The mechanics of biological materials is complicated because they consist of many components such as fibres, proteins and polymers. We aim to use mathematical tools to understand how these components interact in tissues such as the spinal disc which will aid the development of new treatments to reverse the effects of injury, disease or aging.
Computational methods for population-size-dependent branching processes. Branching processes are the primary mathematical tool used to model populations that evolve randomly in time. Most key results in the theory are derived under the simplifying assumption that individuals reproduce and die independently of each other. However, this assumption fails in most real-life situations, in particular when the environment has limited resources or when the habitat has a restricted capacity. This project ....Computational methods for population-size-dependent branching processes. Branching processes are the primary mathematical tool used to model populations that evolve randomly in time. Most key results in the theory are derived under the simplifying assumption that individuals reproduce and die independently of each other. However, this assumption fails in most real-life situations, in particular when the environment has limited resources or when the habitat has a restricted capacity. This project aims to develop novel and effective algorithmic techniques and statistical methods for a class of branching processes with dependences. We will use these results to study significant problems in the conservation of endangered island bird populations in Oceania, and to help inform their conservation management.Read moreRead less
A Novel Geometric Approach to Shocks in Reaction-Nonlinear Diffusion Models. Reaction-nonlinear diffusion models play a vital role in the study of cell migration and population dynamics. However, the presence of aggregation, or backward diffusion, leads to the formation of shock waves - distinct, sharp interfaces between different populations of densities of cells - and the breakdown of the model. This project will develop new geometric methods to explain the formation and temporal evolution of ....A Novel Geometric Approach to Shocks in Reaction-Nonlinear Diffusion Models. Reaction-nonlinear diffusion models play a vital role in the study of cell migration and population dynamics. However, the presence of aggregation, or backward diffusion, leads to the formation of shock waves - distinct, sharp interfaces between different populations of densities of cells - and the breakdown of the model. This project will develop new geometric methods to explain the formation and temporal evolution of these shock waves, while simultaneously unifying existing regularisation techniques under a single, geometric banner. It will devise innovative tools in singular perturbation theory and stability analysis that will identify key parameters in the creation of shock waves, as well as their dynamic behaviour.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE160100690
Funder
Australian Research Council
Funding Amount
$373,316.00
Summary
Mathematical modelling of the early stages of multicellular evolution. This project aims to develop new mathematical methodology to understand the early stages of the evolution of multicellular organisms from unicellular ancestors. This is the best known example of the creation of a new level of biological organisation. However, the early stages of this transition are poorly understood, especially how early groups of cells came to possess Darwinian characteristics, which then allows natural sele ....Mathematical modelling of the early stages of multicellular evolution. This project aims to develop new mathematical methodology to understand the early stages of the evolution of multicellular organisms from unicellular ancestors. This is the best known example of the creation of a new level of biological organisation. However, the early stages of this transition are poorly understood, especially how early groups of cells came to possess Darwinian characteristics, which then allows natural selection to act on them. It is anticipated that the models produced will be used to give the first mechanistic account of this intrinsically stochastic, multi-level, phenomenon. This may lead to new insights into the emergence and subsequent evolution of simple multicellular life cycles and early forms of development.Read moreRead less
New methods for integrating population structure and stochasticity into models of disease dynamics. Epidemics, such as the 2007 equine 'flu outbreak and 2009 swine 'flu pandemic, highlight the need to make informed decisive responses. This project will develop new methods that incorporate two important aspects of disease dynamics---host structure and chance---into mathematical models, and determine their impact in terms of controlling infections.
Quantifying yeast cell mechanisms: filamentous growth and biofilm formation. This project aims to quantify the cellular mechanisms of yeast growth to advance our understanding of these organisms and support strategies to prevent and treat disease. Although yeasts are some of the most studied organisms in biology, their modes of filamentous growth and biofilm formation are not fully understood. Yeasts such as the Candida species cause potentially lethal infections through filamentous invasion of ....Quantifying yeast cell mechanisms: filamentous growth and biofilm formation. This project aims to quantify the cellular mechanisms of yeast growth to advance our understanding of these organisms and support strategies to prevent and treat disease. Although yeasts are some of the most studied organisms in biology, their modes of filamentous growth and biofilm formation are not fully understood. Yeasts such as the Candida species cause potentially lethal infections through filamentous invasion of tissues. The project plans to develop methods to quantify the mechanisms driving these growth processes. These methods will be designed to permit classification and selection of strain-specific properties of yeasts, providing a deeper understanding of the mechanisms controlling cellular and colonial morphology in the growth of Saccharomyces cerevisiae, the most important yeast in both biotechnology and bioscience.Read moreRead less
From individuals to mass organisation: aggregation, synchronisation and collective movement in locusts. By combining field biology, robotics and mathematics, this project will determine how animals flock or swarm and, in particular, how locust nymphs control their collective movement over their lifetime. The mathematical models derived during the project will be directly applied to controlling outbreaks of locusts in Australia, South and North Africa.