Numerical simulation of the fish-like swimming of linked bodies. Although Zoologists have made detailed observations of swimming fish there are still many unanswered questions about how they swim. We do not know how the fins and undulating body work together to produce the high speed of the tuna, or the fast turns of a fish escaping danger. We see dolphins swim through the sea's surface but we don't know if they do that because it is much more efficient. This project is designed to simulate arb ....Numerical simulation of the fish-like swimming of linked bodies. Although Zoologists have made detailed observations of swimming fish there are still many unanswered questions about how they swim. We do not know how the fins and undulating body work together to produce the high speed of the tuna, or the fast turns of a fish escaping danger. We see dolphins swim through the sea's surface but we don't know if they do that because it is much more efficient. This project is designed to simulate arbitrary fish motion and give answers to these and other questions concerning swimming. It may also help humans to swim more efficiently and provide simulation tools for the design of robotic undersea vehicles.Read moreRead less
Ocean currents and genetic connectedness in a complex archipelago. To what extent are marine coastal communities ?open?, i.e. how often do the oceans carry larvae far from their point of spawning, and what influence does such ocean transport have on the spread of genetic information? These are some of the most fundamental questions of biological oceanography; the project will provide new answers by using an extremely detailed genetic data set from the Houtman Abrolhos Islands off Western Austra ....Ocean currents and genetic connectedness in a complex archipelago. To what extent are marine coastal communities ?open?, i.e. how often do the oceans carry larvae far from their point of spawning, and what influence does such ocean transport have on the spread of genetic information? These are some of the most fundamental questions of biological oceanography; the project will provide new answers by using an extremely detailed genetic data set from the Houtman Abrolhos Islands off Western Australian together with an advanced numerical ocean model especially suited to that environment and developed in Australia.Read moreRead less
Chemical warfare at small scales: does eukaryotic chemical defense theory fit biofilms? The ecology of bacteria has long been treated separately from the ecology of higher organisms. Thus we do not know whether the ecology of bacteria operates by the same general rules as those of plants and animals. This significantly diminishes our understanding of the natural world, and our capacity to manage our environment. In this project we will systematically test ecological defense theories in bacterial ....Chemical warfare at small scales: does eukaryotic chemical defense theory fit biofilms? The ecology of bacteria has long been treated separately from the ecology of higher organisms. Thus we do not know whether the ecology of bacteria operates by the same general rules as those of plants and animals. This significantly diminishes our understanding of the natural world, and our capacity to manage our environment. In this project we will systematically test ecological defense theories in bacterial systems. Our aim is to merge our understanding of the ecology of these very different organisms. This integration of plant and animal ecology and environmental microbiology is new for both fields, and thus studies such as this one have the potential to put Australia at the forefront of this exciting new approach to our environment.Read moreRead less
New approaches to measuring the composition and nutrient status of single phytoplankton cells. Phytoplankton support 90% of aquatic food webs, and are responsible for nearly half of global primary productivity. Conversely, blooms of some phytoplankton, often associated with excess nutrients, can cause major environmental problems, including fish kills and risks to human health. However, current methods for determining the nutrient status of phytoplankton are time consuming and ignore the complex ....New approaches to measuring the composition and nutrient status of single phytoplankton cells. Phytoplankton support 90% of aquatic food webs, and are responsible for nearly half of global primary productivity. Conversely, blooms of some phytoplankton, often associated with excess nutrients, can cause major environmental problems, including fish kills and risks to human health. However, current methods for determining the nutrient status of phytoplankton are time consuming and ignore the complexity of responses of different species in mixed populations. This project will develop new, rapid, ways of examining the nutrient condition of individual algal cells, which will be of considerable use to the water industry as well as to our understanding of aquatic ecology.Read moreRead less
Do cleaner-fish control infections of parasitic protozoa transmitted by gnathiid isopods and leeches? We will study a popular example of mutualism, cleaning behaviour, from a different point of view: that cleaner-fish control the parasitic protozoa of the blood of client-fish by eating their vectors. This will provide information on the biological control of vector-borne parasites and develop mathematical models that will help us understand the epidemiology of vector-borne parasites in the sea. ....Do cleaner-fish control infections of parasitic protozoa transmitted by gnathiid isopods and leeches? We will study a popular example of mutualism, cleaning behaviour, from a different point of view: that cleaner-fish control the parasitic protozoa of the blood of client-fish by eating their vectors. This will provide information on the biological control of vector-borne parasites and develop mathematical models that will help us understand the epidemiology of vector-borne parasites in the sea. Our study will provide baseline data of a parasitic disease in a wild population, information useful for managing and monitoring the health of coral reefs. With the increased aquaculture of tropical fish species in Australia, this study will benefit the fish-farming industry by providing information on the biological control of fish parasites.Read moreRead less
The role of natural selection in macroevolution: a case study examining convergence of form and function in marine predator guilds. Darwin's theory of evolution natural selection is one of the most successful in the history of science and provides the framework for modern biology: however, areas of debate or uncertainty are often misinterpreted by non-scientists as indication of fundamental flaws in the theory. New 'hi-tech' tools provide the opportunity to re-examine these areas, and also to de ....The role of natural selection in macroevolution: a case study examining convergence of form and function in marine predator guilds. Darwin's theory of evolution natural selection is one of the most successful in the history of science and provides the framework for modern biology: however, areas of debate or uncertainty are often misinterpreted by non-scientists as indication of fundamental flaws in the theory. New 'hi-tech' tools provide the opportunity to re-examine these areas, and also to demonstrate the process of science to the public. The new tool is Computational Biomechanics, the future of studying biological form, and this project will further develop the leading role of Australian research in this technology which has applications for palaeontology, environmental management, medical science, and the next generation of engineering using 'biomaterials'.Read moreRead less
Host plant choice by marine herbivores: ecological, genetic and historical constraints. Understanding the factors that determine plant choice by herbivores is crucial to predicting the ecological effects of herbivores on plants and herbivore adaptation to plants. This proposal aims to establish how evolution of host choice by a marine herbivore is constrained by ecological, genetic and historical factors. It will determine how the spatial arrangement of plants modifies host use, and whether evol ....Host plant choice by marine herbivores: ecological, genetic and historical constraints. Understanding the factors that determine plant choice by herbivores is crucial to predicting the ecological effects of herbivores on plants and herbivore adaptation to plants. This proposal aims to establish how evolution of host choice by a marine herbivore is constrained by ecological, genetic and historical factors. It will determine how the spatial arrangement of plants modifies host use, and whether evolutionary change by herbivores is constrained by genetic relationships among herbivore traits. The generality of important evolutionary hypotheses that predict plant choice by herbivores will be tested by extending such theory to new organisms and environments.Read moreRead less
The function and maintenance of aggressive mimics: the cleaner fish - fangblenny system. Mimicry is an important biological phenomenon, which is studied extensively by scientists. However, only 5% of papers that were published on mimicry systems in the last five years were from Australian institutes, yet mimicry is ubiquitous in Australia. Therefore, this study will enhance the recognition of Australian research on the international stage in mimicry studies, animal communication systems and beha ....The function and maintenance of aggressive mimics: the cleaner fish - fangblenny system. Mimicry is an important biological phenomenon, which is studied extensively by scientists. However, only 5% of papers that were published on mimicry systems in the last five years were from Australian institutes, yet mimicry is ubiquitous in Australia. Therefore, this study will enhance the recognition of Australian research on the international stage in mimicry studies, animal communication systems and behavioural ecology. This work will aid communication of biology to the general public, as mimicry is a celebrated example of Darwinian adaptation and stories about coral reefs are interesting and intuitive. This study will also provide empirical data to support theoretical development of mimicry theory. Read moreRead less
Colour vision and photoreceptors in reef fish: a model system to discover the function of double cones. Humans are visual animals and as lucky Australians we love to look at The Great Barrier Reef. This project, while rooted in the complexities of visual neurobiology, uses a recently discovered set of 4 different reef fish from the GBR to teach us more about fundamental principles in vision. These fish, diverse as damselfish and snappers, will help solve a mystery centuries old. Double cones are ....Colour vision and photoreceptors in reef fish: a model system to discover the function of double cones. Humans are visual animals and as lucky Australians we love to look at The Great Barrier Reef. This project, while rooted in the complexities of visual neurobiology, uses a recently discovered set of 4 different reef fish from the GBR to teach us more about fundamental principles in vision. These fish, diverse as damselfish and snappers, will help solve a mystery centuries old. Double cones are the commonest daytime photoreceptor in the eyes of almost all vertebrates (humans without them are exceptions) and yet nobody knows what they do. Reef fish have them, so let's ask them what they see!Read moreRead less
Tracking crocodiles in 3-dimensions: A remote monitoring study of movement patterns and diving behaviour. The result from this study will promote a better understanding and appreciation of crocodiles and will help to assist conservation managers in determining population dynamics and movements of crocodiles in Queensland. This study will showcase, on an international stage, Australia as being a leader in crocodilian research and conservation, with the results from this study being actively pres ....Tracking crocodiles in 3-dimensions: A remote monitoring study of movement patterns and diving behaviour. The result from this study will promote a better understanding and appreciation of crocodiles and will help to assist conservation managers in determining population dynamics and movements of crocodiles in Queensland. This study will showcase, on an international stage, Australia as being a leader in crocodilian research and conservation, with the results from this study being actively presented and profiled in both the scientific and general media. Finally this project will encourage and promote a long term research association between the University of Queensland, Australia Zoo and Queensland Parks and Wildlife Service that will stimulate scientific discovery, and promote effective conservation through education and research. Read moreRead less