ARC Centre of Excellence for Plant Success in Nature and Agriculture. The ARC CoE for Plant Success in Nature and Agriculture will discover the adaptive strategies underpinning productivity and resilience in diverse plants and deepen knowledge of the genetic and physiological networks driving key traits. Using novel quantitative and computational approaches, the Centre will link gene networks with traits across biological levels, giving breeders an unparalleled predictive capacity. The Centre wi ....ARC Centre of Excellence for Plant Success in Nature and Agriculture. The ARC CoE for Plant Success in Nature and Agriculture will discover the adaptive strategies underpinning productivity and resilience in diverse plants and deepen knowledge of the genetic and physiological networks driving key traits. Using novel quantitative and computational approaches, the Centre will link gene networks with traits across biological levels, giving breeders an unparalleled predictive capacity. The Centre will accelerate technologies to transfer successful networks into crops and build legal frameworks to secure this knowledge. With a uniquely multidisciplinary team, the Centre will deliver new strategies to address the problems of food security and climate change, establishing Australia as a global leader in these areas.Read moreRead less
My enemy’s enemy is my friend: The genetics of major plant pathogen killers. Fungi are devastating agents of crop diseases. These plant pathogens, in turn, are often parasitized by other fungi in the field. The project will focus on such interactions between powdery mildews, important pathogens of many crops and wild plants, and their common fungal parasites (Ampelomyces spp.) that have already been utilised as
biocontrol agents in crop protection. Genetic and genomic tools will be used to deter ....My enemy’s enemy is my friend: The genetics of major plant pathogen killers. Fungi are devastating agents of crop diseases. These plant pathogens, in turn, are often parasitized by other fungi in the field. The project will focus on such interactions between powdery mildews, important pathogens of many crops and wild plants, and their common fungal parasites (Ampelomyces spp.) that have already been utilised as
biocontrol agents in crop protection. Genetic and genomic tools will be used to determine if these parasites evolved by switching host from plants to plant pathogens. The project has the potential to make a ground-breaking discovery in this field, and also establish the starting point for new innovative methods to protect a wide diversity
of crops using these fungi or specific compounds derived from them.Read moreRead less
Functional analysis of alternative splicing in plants. Higher temperatures affect flowering and seed set in plants. How plants sense and respond to temperature is currently unclear. Here we study alternative splicing, one of the processes affected by temperature. These studies will advance our knowledge and help develop crops that can withstand negative effects of climate change.
Discovery Early Career Researcher Award - Grant ID: DE170100151
Funder
Australian Research Council
Funding Amount
$372,000.00
Summary
Enhancing resistance to wheat stripe rust disease. This project aims to investigate why wheat succumbs to stripe rust fungus, a grave threat to global wheat production. Wheat is the primary agricultural and revenue crop of Australia, cultivated since early European settlement. Severe disease epidemics arise when the fast evolving rust pathogen breaks down host plant genetic resistance. This project will investigate the molecular mechanisms of host-pathogen recognition and the consequences of pat ....Enhancing resistance to wheat stripe rust disease. This project aims to investigate why wheat succumbs to stripe rust fungus, a grave threat to global wheat production. Wheat is the primary agricultural and revenue crop of Australia, cultivated since early European settlement. Severe disease epidemics arise when the fast evolving rust pathogen breaks down host plant genetic resistance. This project will investigate the molecular mechanisms of host-pathogen recognition and the consequences of pathogen variation to determine the causes of resistance breakdown. The expected outcome is robust rust-resistant wheat cultivars to maintain global food security.Read moreRead less
Building better Brassicas: Understanding disease resistance mechanisms across the Brassicaceae. Brassica species are important crops producing cooking oil, vegetables and biofuel, grown in diverse environments with a high economic and export value. Blackleg disease, caused by the fungus Leptospheria maculans, is the most important disease of brassica crops world-wide. The newly available brassica genome sequence provides the resources to study the co-evolution of this plant and pathogen. This pr ....Building better Brassicas: Understanding disease resistance mechanisms across the Brassicaceae. Brassica species are important crops producing cooking oil, vegetables and biofuel, grown in diverse environments with a high economic and export value. Blackleg disease, caused by the fungus Leptospheria maculans, is the most important disease of brassica crops world-wide. The newly available brassica genome sequence provides the resources to study the co-evolution of this plant and pathogen. This project will characterise the evolution and conservation of resistance genes in wild and cultivated brassicas, using next-generation sequencing technology, to assess their potential for crop improvement. An understanding of the evolution of genes responsible for resistance will lead to improved plant protection strategies for brassica crops.Read moreRead less
Systemic gene silencing in Arabidopsis, and relevance to plant biology. Gene silencing is a highly conserved process in plants and animals. It is of fundamental importance to gene regulation, virus defence, genome response to environment, and genome evolution. Remarkably, when gene silencing is triggered in plants it can spread throughout the organism. The aim of this project is to define the mechanism of intercellular movement of gene silencing in plants, and its relevance to plant growth and d ....Systemic gene silencing in Arabidopsis, and relevance to plant biology. Gene silencing is a highly conserved process in plants and animals. It is of fundamental importance to gene regulation, virus defence, genome response to environment, and genome evolution. Remarkably, when gene silencing is triggered in plants it can spread throughout the organism. The aim of this project is to define the mechanism of intercellular movement of gene silencing in plants, and its relevance to plant growth and defence against pathogens. Expected outcomes include increased understanding of intercellular genetic signalling in plants and its role in plant growth and disease resistance. The findings may also shed new light on mechanisms of gene silencing in animals.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE120101706
Funder
Australian Research Council
Funding Amount
$375,000.00
Summary
Worth its salt: advancing knowledge of salinity tolerance with mangroves as a model system. This project aims to understand how salinity tolerance is achieved in mangroves, which are highly salt tolerant plants. Using a combination of physiological and gene expression technologies the project will measure the response of mangroves to elevated salinity and atmospheric carbon dioxide, contributing to the development of salt tolerant next generation crops.
Genome dynamics following plastid endosymbiosis. Plastid endosymbiosis events (enslavement of an algal cell inside of a host cell to form a plastid) are difficult to pinpoint because the genomic data required for a broad array of species are rarely available. Furthermore, the classical method used to infer endosymbiotic gene transfers is being criticised. This project will elucidate the origin of chlorarachniophyte and dinoflagellate plastids and characterise the genome dynamics following endosy ....Genome dynamics following plastid endosymbiosis. Plastid endosymbiosis events (enslavement of an algal cell inside of a host cell to form a plastid) are difficult to pinpoint because the genomic data required for a broad array of species are rarely available. Furthermore, the classical method used to infer endosymbiotic gene transfers is being criticised. This project will elucidate the origin of chlorarachniophyte and dinoflagellate plastids and characterise the genome dynamics following endosymbiosis. It uses densely sampled genome data obtained with high-throughput sequencing technologies. Simulation studies will be used to evaluate methods for inferring endosymbiotic gene transfer and alignment-free methods will be used to improve phylogenomic pipelines.Read moreRead less
Molecular dissection of systemic regulation of nodulation in legumes. This project aims to discover and characterise critical new factors that control legume nodule numbers. Legume plants can increase crop productivity and improve agricultural sustainability by forming specialised root nodules that house nitrogen-fixing rhizobia bacteria. The project will use a multidisciplinary approach to identify the elusive Shoot Derived Inhibitor molecule and define its interaction with novel genes, microRN ....Molecular dissection of systemic regulation of nodulation in legumes. This project aims to discover and characterise critical new factors that control legume nodule numbers. Legume plants can increase crop productivity and improve agricultural sustainability by forming specialised root nodules that house nitrogen-fixing rhizobia bacteria. The project will use a multidisciplinary approach to identify the elusive Shoot Derived Inhibitor molecule and define its interaction with novel genes, microRNAs and phytohormones in nodulation control. Findings will considerably enhance the current nodulation models and will benefit strategies to generate new compounds and crop varieties that mitigate fertiliser requirements, improve soil conditions and increase food security.Read moreRead less
Deciphering the role of microRNAs during pathogen attack: new concepts for disease resistance in plants. Small non-coding RNAs called ‘microRNAs’ regulate diverse pathways in plants including plant defence against pathogens. This project will investigate the roles of plant microRNAs in response to four economically important viruses and compare these to a bacterial and a fungal pathogen. The aim is to dissect the underlying molecular mechanism of microRNA-based gene regulation during pathogen in ....Deciphering the role of microRNAs during pathogen attack: new concepts for disease resistance in plants. Small non-coding RNAs called ‘microRNAs’ regulate diverse pathways in plants including plant defence against pathogens. This project will investigate the roles of plant microRNAs in response to four economically important viruses and compare these to a bacterial and a fungal pathogen. The aim is to dissect the underlying molecular mechanism of microRNA-based gene regulation during pathogen infection and specifically identify common microRNAs which have evident impact during virus attack. This study is crucial due to its focus on virus diseases that cause severe damage to many crop plants; a global issue with strong implications for food security. This project is expected to provide basic new concepts for disease resistance in plants.Read moreRead less