Advanced matrix-analytic methods with applications. Over the last twenty-five years, matrix-analytic methods have proved to be very successful in formulating and analysing certain classes of stochastic models. Motivated by applications, this project will investigate more advanced matrix-analytic methods than have hitherto been studied.
Unravelling the principles of bilateral brain wiring. This project seeks to investigate the molecular principles of brain wiring in mammals and how small changes can generate complex outcomes. Neurons in the mammalian brain must be precisely wired together for the brain to function correctly. The project aims to identify the molecular and cellular rules governing commissural wiring in the mammalian cortex to determine how the largest fibre tract in the human brain, the corpus callosum, evolved. ....Unravelling the principles of bilateral brain wiring. This project seeks to investigate the molecular principles of brain wiring in mammals and how small changes can generate complex outcomes. Neurons in the mammalian brain must be precisely wired together for the brain to function correctly. The project aims to identify the molecular and cellular rules governing commissural wiring in the mammalian cortex to determine how the largest fibre tract in the human brain, the corpus callosum, evolved. This may have involved modifications in mechanisms affecting axon guidance that differ between placentals and marsupials. The project investigates the regulatory gene networks determining commissural neuron fate, the regulation of axon guidance components, and the influence of surrounding brain tissue on the development of commissural connections.Read moreRead less
Optimising the search for the next discovery in particle physics. This project aims to uncover the new theory of particle physics that can simultaneously explain the Higgs mechanism, the presence of dark matter and the current abundance of matter over antimatter in our universe. This is not possible with current theories. This project aims to find viable theories using a wide range of data from particle astrophysics and collider experiments. With the resulting knowledge, this project aims to des ....Optimising the search for the next discovery in particle physics. This project aims to uncover the new theory of particle physics that can simultaneously explain the Higgs mechanism, the presence of dark matter and the current abundance of matter over antimatter in our universe. This is not possible with current theories. This project aims to find viable theories using a wide range of data from particle astrophysics and collider experiments. With the resulting knowledge, this project aims to design, optimise and implement better searches for new physics at the Large Hadron Collider (LHC). The new LHC results will be used to either determine the correct explanation for any new discoveries or alternatively to provide definitive limits on new theories. The results will be used to make high impact statements on the design of future facilities.Read moreRead less
Human Leukocyte Antigen-A and -B regulation of Natural Killer cell function. The aim of this project is to determine how genetic variation in the genes encoding cell surface receptors expressed by innate lymphocytes and the molecules they recognise diversifies their capacity to sense and respond to infection. This knowledge is critical for understanding why there are intrinsic differences between individuals with respect to their capacity to respond to different types of infection and will ultim ....Human Leukocyte Antigen-A and -B regulation of Natural Killer cell function. The aim of this project is to determine how genetic variation in the genes encoding cell surface receptors expressed by innate lymphocytes and the molecules they recognise diversifies their capacity to sense and respond to infection. This knowledge is critical for understanding why there are intrinsic differences between individuals with respect to their capacity to respond to different types of infection and will ultimately inform our capacity to better deploy personalised medicines.Read moreRead less
Computational methods for population-size-dependent branching processes. Branching processes are the primary mathematical tool used to model populations that evolve randomly in time. Most key results in the theory are derived under the simplifying assumption that individuals reproduce and die independently of each other. However, this assumption fails in most real-life situations, in particular when the environment has limited resources or when the habitat has a restricted capacity. This project ....Computational methods for population-size-dependent branching processes. Branching processes are the primary mathematical tool used to model populations that evolve randomly in time. Most key results in the theory are derived under the simplifying assumption that individuals reproduce and die independently of each other. However, this assumption fails in most real-life situations, in particular when the environment has limited resources or when the habitat has a restricted capacity. This project aims to develop novel and effective algorithmic techniques and statistical methods for a class of branching processes with dependences. We will use these results to study significant problems in the conservation of endangered island bird populations in Oceania, and to help inform their conservation management.Read moreRead less
How does timing affect mammalian brain development and evolution? This project aims to generate fundamental knowledge on the origin of diversity in mammalian brain circuits by studying development of marsupials and rodents. The expected outcome is to elucidate how differences in the timing, rate and sequence of development of gene expression, cell differentiation and circuit formation can relate to the origin of key evolutionary innovations in the mammalian brain. The significance of understandi ....How does timing affect mammalian brain development and evolution? This project aims to generate fundamental knowledge on the origin of diversity in mammalian brain circuits by studying development of marsupials and rodents. The expected outcome is to elucidate how differences in the timing, rate and sequence of development of gene expression, cell differentiation and circuit formation can relate to the origin of key evolutionary innovations in the mammalian brain. The significance of understanding the dynamics of developmental systems that shape complex brain traits includes establishing new developmental paradigms in evolutionary theory, generating new tools to investigate and manipulate brain gene expression in vivo, and the potential discovery of the causes of neurodevelopmental dysfunction.Read moreRead less
The role of the ammonium transport bHLHm1/AMF1 regulatory loci in plants. This project aims to investigate the role of a regulatory locus in the regulation of ammonium transport in plants and the interacting genetic and biochemical signalling promoting the interaction. Ammonium is an important nutrient source for plant growth and development. It has been recently identified that a new transport mechanism (AMF1 ) mediates ammonium transport across legume root nodule cellular membranes. AMF1 was i ....The role of the ammonium transport bHLHm1/AMF1 regulatory loci in plants. This project aims to investigate the role of a regulatory locus in the regulation of ammonium transport in plants and the interacting genetic and biochemical signalling promoting the interaction. Ammonium is an important nutrient source for plant growth and development. It has been recently identified that a new transport mechanism (AMF1 ) mediates ammonium transport across legume root nodule cellular membranes. AMF1 was identified through a transcriptional interaction with a membrane localised bHLHm1 transcription factor. Both bHLHm1 and AMF1 belong to a unique chromosomal regulatory locus common across sequenced dicot plant species.Read moreRead less
Engineered plant receptors as orthogonal neuronal switches. This project aims to develop synthetic biology methods to study brain function by utilising engineered plant receptors. This project will expand our ability to manipulate nerve cell function with high specificity and without side effects in freely behaving animals. Plant receptors will be developed into molecular tools in an iterative process that improves key properties using rational protein design. Expected outcomes include innovativ ....Engineered plant receptors as orthogonal neuronal switches. This project aims to develop synthetic biology methods to study brain function by utilising engineered plant receptors. This project will expand our ability to manipulate nerve cell function with high specificity and without side effects in freely behaving animals. Plant receptors will be developed into molecular tools in an iterative process that improves key properties using rational protein design. Expected outcomes include innovative and broadly-applicable neuroscience methods and an understanding of receptors involved in plant growth and defense. Benefits of this project include an enhanced capacity to generate knowledge, multidisciplinary training opportunities and patentable synthetic biology technologies.Read moreRead less
Hierarchical information processing in the primate visual cortex. This project aims to understand how visual information is transformed across hierarchical levels in the brain. Neuroscientists have long recognised that the visual cortex can be conceptualised as a hierarchical processing network. This became apparent when learning algorithms based on hierarchical networks ("deep learning") changed artificial intelligence. This project will combine high-throughput electrophysiology with analytical ....Hierarchical information processing in the primate visual cortex. This project aims to understand how visual information is transformed across hierarchical levels in the brain. Neuroscientists have long recognised that the visual cortex can be conceptualised as a hierarchical processing network. This became apparent when learning algorithms based on hierarchical networks ("deep learning") changed artificial intelligence. This project will combine high-throughput electrophysiology with analytical tools adopted from deep learning. By explaining the physiological properties of higher-level neurons in terms of hierarchical networks, the project expects to address long standing questions in neuroscience, and provide insights on biological hierarchical computation.Read moreRead less
Design and Fabrication of 2D Hybrid Materials. There are >300 2D materials like graphene with potentially exotic and useful electrooptic and superconductor properties that will drive novel industrial applications. This project aims to use advanced computational and experimental techniques to discover and fabricate new 2D hybrid materials built from different layers of 2D materials. This approach is essential as the number of possible hybrids is huge (millions) and current processes to identify a ....Design and Fabrication of 2D Hybrid Materials. There are >300 2D materials like graphene with potentially exotic and useful electrooptic and superconductor properties that will drive novel industrial applications. This project aims to use advanced computational and experimental techniques to discover and fabricate new 2D hybrid materials built from different layers of 2D materials. This approach is essential as the number of possible hybrids is huge (millions) and current processes to identify and build 2D hybrids are technically challenging and slow. Expected outcomes include defining a new paradigm for efficient identification and synthesis of 2D hybrids with exotic, bespoke properties. The generation of a large database of materials for researchers/industry would be of wide benefit.Read moreRead less