Structural reorganization of the hymenopteran mitochondrial genome. This study will be the first detailed investigation of the evolution of mt genome reorganization, and as such it will identify the processes that shape the evolution of a molecule widely used to interpret phylogeny. A description of the processes that lead to mt genome reorganization will have a substantial impact on our understanding in two areas of mt biology; (1) the discovery of new molecular phenomena that impact on the or ....Structural reorganization of the hymenopteran mitochondrial genome. This study will be the first detailed investigation of the evolution of mt genome reorganization, and as such it will identify the processes that shape the evolution of a molecule widely used to interpret phylogeny. A description of the processes that lead to mt genome reorganization will have a substantial impact on our understanding in two areas of mt biology; (1) the discovery of new molecular phenomena that impact on the organization and evolution of this genome, and (2) the interpretation of its phylogenetic content. It will establish our research group as a leader in the field of evolutionary genetics. Training of high quality students, with exposure to international researchers, will be a significant component of this program.Read moreRead less
Expanding gene-environment causality in evolutionary genetics. This project aims to investigate how environmental experiences shape phenotypes, engender variance in populations and ultimately contribute to evolution. It targets new discoveries for how environmental effects can multiply throughout ontogeny and/or propagate across generations. Although widely speculated to support new evolutionary paradigms, such knowledge lacks scrutiny according to the formal metric of quantitative genetics. Thi ....Expanding gene-environment causality in evolutionary genetics. This project aims to investigate how environmental experiences shape phenotypes, engender variance in populations and ultimately contribute to evolution. It targets new discoveries for how environmental effects can multiply throughout ontogeny and/or propagate across generations. Although widely speculated to support new evolutionary paradigms, such knowledge lacks scrutiny according to the formal metric of quantitative genetics. This project seeks to expose guppy pedigrees to unique manipulations and reconcile adaptive evolution across captive and wild populations. The outcome is expected to address knowledge gaps in the life and human sciences and potentially inform goals in primary production and conservation.Read moreRead less
Testing links between genomic and morphological evolutionary rates. This project aims to identify, understand, and characterise patterns of evolutionary rates across different levels of biological variation. The project expects to generate knowledge about the tempo and mode of evolution by using a phylogenetic approach to test fundamental models of evolutionary rates, including the link between rates of genomic and morphological evolution. Expected outcomes of this project include detailed insig ....Testing links between genomic and morphological evolutionary rates. This project aims to identify, understand, and characterise patterns of evolutionary rates across different levels of biological variation. The project expects to generate knowledge about the tempo and mode of evolution by using a phylogenetic approach to test fundamental models of evolutionary rates, including the link between rates of genomic and morphological evolution. Expected outcomes of this project include detailed insights into the tempo and mode of macroevolution, better modelling of genomic and phenotypic evolution, and improved design of studies in evolutionary genomics. Benefits of the project include greater understanding of the evolutionary processes that have generated the diversity of the Australian biota.Read moreRead less
Retracing the Early Evolution of Metazoa using Novel Methods and Strategies. Metazoa is one of the best-characterised groups of species in terms of its morphology, fossil record, development, and genetic make-up, but the phylogeny remains obscure because the fossil record is incomplete and because molecular phylogenetic methods have not yet been developed with the complexity of genomic data in mind. We will develop methods and strategies for the analysis of whole genomes, and use them in studies ....Retracing the Early Evolution of Metazoa using Novel Methods and Strategies. Metazoa is one of the best-characterised groups of species in terms of its morphology, fossil record, development, and genetic make-up, but the phylogeny remains obscure because the fossil record is incomplete and because molecular phylogenetic methods have not yet been developed with the complexity of genomic data in mind. We will develop methods and strategies for the analysis of whole genomes, and use them in studies of the mitochondrial genome. We will infer the animal phylogeny, and use it to chart the evolution of animal morphology and development, and the evolution of mitochondrial genetic codes, gene order, and nucleotide content.Read moreRead less
Intergenomic conflict and the evolution of uniparental inheritance of mitochondria. Why do all mammalian male sperm cells destroy their own mitochondria after fertilisation? A major evolutionary theory, the conflict hypothesis, aims to answer this question. The argument goes as follows. If an organism were to contain mitochondria from both parents, each mitochondrial lineage would be selected in an “arms race” to replicate faster than the other lineage, and this would likely be costly to the org ....Intergenomic conflict and the evolution of uniparental inheritance of mitochondria. Why do all mammalian male sperm cells destroy their own mitochondria after fertilisation? A major evolutionary theory, the conflict hypothesis, aims to answer this question. The argument goes as follows. If an organism were to contain mitochondria from both parents, each mitochondrial lineage would be selected in an “arms race” to replicate faster than the other lineage, and this would likely be costly to the organism. Uniparental inheritance of mitochondria prevents such evolutionary arms race. Sounds plausible? Yes. Has it been tested? No. This project will be the first attempt to test this intriguing hypothesis. Experimental evidence for the evolution of selfish mitochondria would provide solid support for this major evolutionary theory. Read moreRead less
Lamarckian lizards: novel integration of telomere epigenetics, free radicals and innate antioxidants in condition-dependant sexual signal evolution. In 2009, the Nobel Prize in physiology was awarded Drs. Blackburn, Greider and Szostak for discoveries on telomeres. This project will investigate how telomeres not only cap chromosomes from destruction by free radicals, but also have a key role in life itself, in their influence on ageing, longevity, ornaments and lifetime reproductive success.
Understanding how reproduction and sexual conflict drive sex-dependent longevity and ageing. The biological study of longevity and ageing has two important fronts: understanding how evolution shapes lifespan and ageing, and the mechanistic study of how molecules, genes, hormones, tissues and cells interact during ageing. The evolutionary study of ageing is considered one of the success stories of the emerging field of evolutionary medicine, yet we desperately need greater integration of the evol ....Understanding how reproduction and sexual conflict drive sex-dependent longevity and ageing. The biological study of longevity and ageing has two important fronts: understanding how evolution shapes lifespan and ageing, and the mechanistic study of how molecules, genes, hormones, tissues and cells interact during ageing. The evolutionary study of ageing is considered one of the success stories of the emerging field of evolutionary medicine, yet we desperately need greater integration of the evolutionary and mechanistic spheres. This project addresses why males and females have different lifespans and age differently in a way that bridges evolutionary and mechanistic study, and will build Australia's research capacity to study ageing at both levels. Read moreRead less
The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molec ....The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molecular evolution between the X-chromosome and autosomes. Utilising Australia’s endemic mammalian fauna as a tractable model system, I will link population processes with macro-evolutionary outcomes to show how genome architecture underpins biodiversity.Read moreRead less
Integrating sexual selection and the allocation of sex in the zebra finch: back to the outback. The Australian zebra finch has become the primary avian model species in evolutionary biology studies in Europe and North America as the focus of classic laboratory-based studies of sexual selection, and sex allocation. Surprisingly, these studies have focused on populations of birds maintained in an unnatural environment and in captivity for decades that have been through tens of generations of artif ....Integrating sexual selection and the allocation of sex in the zebra finch: back to the outback. The Australian zebra finch has become the primary avian model species in evolutionary biology studies in Europe and North America as the focus of classic laboratory-based studies of sexual selection, and sex allocation. Surprisingly, these studies have focused on populations of birds maintained in an unnatural environment and in captivity for decades that have been through tens of generations of artificial selection, the effects of which are unknown - not a trivial issue for students of evolution. Using experimental manipulations I will study these high profile research areas in wild populations, focusing international attention on this internationally recognised Australian species and raising the profile of Australian research. Read moreRead less
The evolution of multipartite mitochondrial genomes in the cyst-forming nematodes. The cyst-forming nematodes are a serious pest of agricultural crops throughout the world, attacking cereal, root and legume crops. Although sporadically recorded in Australia, they have not become established here. This project will characterize unique sequences from the noncoding portion of the mitochondrial genome of a range of cyst-forming nematodes, facilitating the development of molecular diagnostic screen ....The evolution of multipartite mitochondrial genomes in the cyst-forming nematodes. The cyst-forming nematodes are a serious pest of agricultural crops throughout the world, attacking cereal, root and legume crops. Although sporadically recorded in Australia, they have not become established here. This project will characterize unique sequences from the noncoding portion of the mitochondrial genome of a range of cyst-forming nematodes, facilitating the development of molecular diagnostic screening tools for these crop pests. This program will train a number of young scientists with skills in biotechnology, preparing them to join programs safeguarding our agricultural industries.Read moreRead less