Functional genomics of light stress resistance in the model organism Chlamydomonas: combining molecular genetics, transcriptome and proteome analysis. This project aims at combining molecular genetics, transcriptome and proteome analysis to identify genes and pathways underlying high light stress tolerance in previously isolated mutants of the chlorophyte Chlamydomonas reinhardtii. Comprehensive profiles of transcriptome-proteome linkage will be constructed without the complications of multicel ....Functional genomics of light stress resistance in the model organism Chlamydomonas: combining molecular genetics, transcriptome and proteome analysis. This project aims at combining molecular genetics, transcriptome and proteome analysis to identify genes and pathways underlying high light stress tolerance in previously isolated mutants of the chlorophyte Chlamydomonas reinhardtii. Comprehensive profiles of transcriptome-proteome linkage will be constructed without the complications of multicellularity for this unicellular photosynthetic model organism. We will establish a public proteome reference database and provide new microarrays and molecular markers beneficial for research in Chlamydomonas. We expect to advance understanding of high light resistance mechanisms so that it will eventually be applicable to improve productivity in crop plants growing under various environmental stress conditions.Read moreRead less
Long noncoding RNAs and their regulatory roles in epigenetic control of gene expression in plants. Epigenetic control of gene expression plays a critical role in development, environmental adaptation, stress response and disease resistance in plants, but its molecular basis remains largely unknown. The proposed study should contribute to the emerging field of epigenetics by discovering new regulatory noncoding RNAs involved in epigenetic mechanisms in plants. These new discoveries could potentia ....Long noncoding RNAs and their regulatory roles in epigenetic control of gene expression in plants. Epigenetic control of gene expression plays a critical role in development, environmental adaptation, stress response and disease resistance in plants, but its molecular basis remains largely unknown. The proposed study should contribute to the emerging field of epigenetics by discovering new regulatory noncoding RNAs involved in epigenetic mechanisms in plants. These new discoveries could potentially provide new opportunities and platforms for improving the performance, yield and quality of crop plants. The proposed study is therefore consistent with the national research priority goals such as breakthrough science, frontier technologies and promoting an innovation culture.Read moreRead less
Controlling the rate of transcription and translation of Rubisco transgenes effectively in higher-plant plastids. Genetic transformation of the circular genome of the plastids provides a containable means for modifying plant growth by manipulating photosynthesis. Although the transformation mechanism is precise, predicting the level of foreign gene expression is difficult because the amounts of messenger RNA and protein produced by foreign genes in plastids varies widely, even when the protein a ....Controlling the rate of transcription and translation of Rubisco transgenes effectively in higher-plant plastids. Genetic transformation of the circular genome of the plastids provides a containable means for modifying plant growth by manipulating photosynthesis. Although the transformation mechanism is precise, predicting the level of foreign gene expression is difficult because the amounts of messenger RNA and protein produced by foreign genes in plastids varies widely, even when the protein assembles without difficulty. This project will devise strategies for controlling this variability that will facilitate attempts to exploit plastid transformation for transplanting better versions of the photosynthetic CO2-fixing enzyme, Rubisco, into plants to improve their growth efficiency in terms of water, fertiliser and light use.Read moreRead less
Enabling Molecular Plant Breeding for Drought Adaptation Using Genome-to-Phenome Modelling Technologies. Effective molecular plant breeding for improved water productivity of sorghum would generate significant economic and social benefits for rural communities in NE Australia. There is a significant opportunity to expand the sorghum industry in the region. Despite the global financial crisis, global demand for meat continues to increase, generating strong demand from intensive livestock industri ....Enabling Molecular Plant Breeding for Drought Adaptation Using Genome-to-Phenome Modelling Technologies. Effective molecular plant breeding for improved water productivity of sorghum would generate significant economic and social benefits for rural communities in NE Australia. There is a significant opportunity to expand the sorghum industry in the region. Despite the global financial crisis, global demand for meat continues to increase, generating strong demand from intensive livestock industries for feed grain. Price is projected to return to high levels given continuing use of major feed grains for biofuel. A 10% increase in sorghum production would add net value of $48M annually, much via employment. The scientific content of this project positions Australia at the leading edge globally in this emerging research field. Read moreRead less
Novel photoprotective mechanisms and functional biodiversity of high light tolerance in the model alga Chlamydomonas. Most plants have limited capacity to avoid high light (HL) stress which commonly accompanies drought and high temperature stress. We will identify novel genes and proteins that underlie diverse mechanisms of photoprotection in unique very high light resistant (VHLR) mutants in the alga Chlamydomonas and develop new tools to screen other plants for these attributes. Depending on p ....Novel photoprotective mechanisms and functional biodiversity of high light tolerance in the model alga Chlamydomonas. Most plants have limited capacity to avoid high light (HL) stress which commonly accompanies drought and high temperature stress. We will identify novel genes and proteins that underlie diverse mechanisms of photoprotection in unique very high light resistant (VHLR) mutants in the alga Chlamydomonas and develop new tools to screen other plants for these attributes. Depending on progress, we expect to express them in the higher plant Arabidopsis as a first step towards utilization of VHLR genes for crop improvement. Understanding the mechanisms conferring HL photoprotection is a research priority in plant sciences and will further strengthen Australia's innovative contributions to the internationally networked Chlamydomonas Genome Project.Read moreRead less
CENTRE for INTEGRATIVE LEGUME RESEARCH. Legumes are essential for environmental sustainability and are important for maintaining human health. The Centre combines innovative genomic approaches to investigate the causal phenotypic links required for regulation of legume growth. The unique coexistence of multiple pluripotent meristems in shoots, roots, flowers and nodules permits the discovery of new paradigms governing legume architecture, reproductive differentiation and root-nodule developmen ....CENTRE for INTEGRATIVE LEGUME RESEARCH. Legumes are essential for environmental sustainability and are important for maintaining human health. The Centre combines innovative genomic approaches to investigate the causal phenotypic links required for regulation of legume growth. The unique coexistence of multiple pluripotent meristems in shoots, roots, flowers and nodules permits the discovery of new paradigms governing legume architecture, reproductive differentiation and root-nodule development. New knowledge of the plant growth processes through mechanistic analysis of organ induction provides the tools to optimise the legume's productivity, quality, and environment adaptation.Read moreRead less
MicroRNA control of gene expression and development in plants. Controlling a gene's activity is fundamental in biotechnology, from dissecting a gene's function to introducing desired traits in crop plants. Recently a new class of genes have been identified that are 'master-regulators' able to control the activity of many genes, and through this, they can ultimately control how an organism develops and functions. By understanding how these genes operate and the extent of their influence, not only ....MicroRNA control of gene expression and development in plants. Controlling a gene's activity is fundamental in biotechnology, from dissecting a gene's function to introducing desired traits in crop plants. Recently a new class of genes have been identified that are 'master-regulators' able to control the activity of many genes, and through this, they can ultimately control how an organism develops and functions. By understanding how these genes operate and the extent of their influence, not only will we gain greater insights into the gene regulatory networks required for multicellular life, but how we may develop methods of controlling gene activity that will have tremendous biotechnological applications.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE130100081
Funder
Australian Research Council
Funding Amount
$500,000.00
Summary
Spectral climate chamber facilities for phenomic studies of plant light response adaptation. Climates are changing, altering planting regimes in agriculture, and disrupting local adaptation in foundation species. The genetic basis of climate adaptation will be dissected in new plant growth facilities, equipped with real-time imaging and environmental controls that can mimic dynamic seasonal growing conditions and weather stress events.
ARC Centre of Excellence for Plant Success in Nature and Agriculture. The ARC CoE for Plant Success in Nature and Agriculture will discover the adaptive strategies underpinning productivity and resilience in diverse plants and deepen knowledge of the genetic and physiological networks driving key traits. Using novel quantitative and computational approaches, the Centre will link gene networks with traits across biological levels, giving breeders an unparalleled predictive capacity. The Centre wi ....ARC Centre of Excellence for Plant Success in Nature and Agriculture. The ARC CoE for Plant Success in Nature and Agriculture will discover the adaptive strategies underpinning productivity and resilience in diverse plants and deepen knowledge of the genetic and physiological networks driving key traits. Using novel quantitative and computational approaches, the Centre will link gene networks with traits across biological levels, giving breeders an unparalleled predictive capacity. The Centre will accelerate technologies to transfer successful networks into crops and build legal frameworks to secure this knowledge. With a uniquely multidisciplinary team, the Centre will deliver new strategies to address the problems of food security and climate change, establishing Australia as a global leader in these areas.Read moreRead less