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Molecular analysis of glutathione transferase interactions with drugs and physiological ligands. Proteins called glutathione transferases protect us from toxic molecules that we ingest, breathe in or are by-products of normal metabolism. The same proteins also bind to many types of drugs leading them to be excreted from the body. In this project molecular structures of glutathione transferases bound to anti-cancer drugs will be determined as the basis for devising inhibitors of the protein that ....Molecular analysis of glutathione transferase interactions with drugs and physiological ligands. Proteins called glutathione transferases protect us from toxic molecules that we ingest, breathe in or are by-products of normal metabolism. The same proteins also bind to many types of drugs leading them to be excreted from the body. In this project molecular structures of glutathione transferases bound to anti-cancer drugs will be determined as the basis for devising inhibitors of the protein that will make drugs much more effective.Read moreRead less
Structural studies of glutathione transferases: a model system for functional genomics and drug design. Glutathione S-transferases (GSTs) are a large family of multi-functional proteins that play a vital role in an organism's defence against toxic chemicals. However, they also attack a variety of drugs and hence are a prime target for the development of isoform-specific inhibitors. We will determine the 3D atomic structures of GSTs in complex with a range of substrates and inhibitors as a basis ....Structural studies of glutathione transferases: a model system for functional genomics and drug design. Glutathione S-transferases (GSTs) are a large family of multi-functional proteins that play a vital role in an organism's defence against toxic chemicals. However, they also attack a variety of drugs and hence are a prime target for the development of isoform-specific inhibitors. We will determine the 3D atomic structures of GSTs in complex with a range of substrates and inhibitors as a basis for the design of compounds to improve the efficacy of anti-cancer and other drugs. This is an ambitious, wide-ranging project involving collaborators around the world. We expect the results will not only greatly increase our knowledge of an important enzyme family, but will also have applications in protein folding, catalysis, protein engineering, evolution, drug design and functional genomics. Read moreRead less
Organophosphate pesticide degradation: evolved enzymes and biomimetics for bioremediation and medicine. Organophosphate (OP) pesticides are an indispensable part of modern agriculture - their use results in dramatically increased crop yields. However, they are toxic and can damage the environment and cause significant health problems. Enzymes are currently being used to treat runoff water that is contaminated with OPs. The same enzymes also have the potential to aid in the treatment of OP poison ....Organophosphate pesticide degradation: evolved enzymes and biomimetics for bioremediation and medicine. Organophosphate (OP) pesticides are an indispensable part of modern agriculture - their use results in dramatically increased crop yields. However, they are toxic and can damage the environment and cause significant health problems. Enzymes are currently being used to treat runoff water that is contaminated with OPs. The same enzymes also have the potential to aid in the treatment of OP poisoning. However, OP degrading enzymes could be improved in many ways - we will evolve these enzymes to enhance their catalytic properties - to enable them to act more efficiently on an increased number of OPs. Read moreRead less
Evolving enzymes to harness the clean energy reserves of nature. We want to improve enzymes that are used by nature to harness huge amounts of energy - the energy present in glucose, one of the most abundant materials in the biosphere. The enzymes will be evolved to efficiently produce biological power in a practically useable form rather than for the growth of the organisms from which they originated. We will use this energy to drive the synthesis of chemicals of practical value, truly green ch ....Evolving enzymes to harness the clean energy reserves of nature. We want to improve enzymes that are used by nature to harness huge amounts of energy - the energy present in glucose, one of the most abundant materials in the biosphere. The enzymes will be evolved to efficiently produce biological power in a practically useable form rather than for the growth of the organisms from which they originated. We will use this energy to drive the synthesis of chemicals of practical value, truly green chemistry. We also seek to answer questions such as: how do proteins evolve, how do enzymes work and how can biochemical pathways be optimised for industrial processes? This information will be of fundamental benefit for the use of enzymes in green chemistry, providing cleaner ways to produce important chemicals. Read moreRead less
Novel ultraviolet radiation filters from extreme environments. This project aims to exploit uncultured microorganisms to produce and characterise novel ultraviolet radiation-filter biosynthesis pathways. Current ultraviolet radiation-filtering compounds are toxic and persistent. There is a need for biodegradable, ultraviolet radiation filters that are safe for use across a variety of health and industrial applications. Over millions of years, the damaging effect of ultraviolet radiation has exer ....Novel ultraviolet radiation filters from extreme environments. This project aims to exploit uncultured microorganisms to produce and characterise novel ultraviolet radiation-filter biosynthesis pathways. Current ultraviolet radiation-filtering compounds are toxic and persistent. There is a need for biodegradable, ultraviolet radiation filters that are safe for use across a variety of health and industrial applications. Over millions of years, the damaging effect of ultraviolet radiation has exerted selective pressure on organisms that has driven the evolutionary diversity of natural radiation-filtering compounds. This project expects to characterise and harness the microbial diversity of unique high ultraviolet radiation ecosystems via synthetic biology to produce industrially and pharmacologically useful ultraviolet radiation filters.Read moreRead less
Mechanistic Studies of Dimethylsulfide Dehydrogenase: A Novel Bacterial Molybdoenzyme. The aim of this proposal is to use electrochemical, spectroscopic and molecular biological techniques to understand the mechanism of action of the enzyme dimethylsulfide dehydrogenase. This enzyme is representative of an major group of molybdenum-containing enzymes that have importance in microbial biotransformations. The project will provide fundamental information about a multi-redox centre protein that has ....Mechanistic Studies of Dimethylsulfide Dehydrogenase: A Novel Bacterial Molybdoenzyme. The aim of this proposal is to use electrochemical, spectroscopic and molecular biological techniques to understand the mechanism of action of the enzyme dimethylsulfide dehydrogenase. This enzyme is representative of an major group of molybdenum-containing enzymes that have importance in microbial biotransformations. The project will provide fundamental information about a multi-redox centre protein that has potential application in biosensors and biocatalysis.Read moreRead less
Structural studies of catalysis and electron transfer by copper proteins. We propose to determine the crystal structures of five copper-containing proteins. Three are amine oxidases, enzymes that protect a wide range of organisms against toxic cell products (amines). Novel chemical modifications and crystallographic techniques will be used to test hypotheses for the enzyme mechanism. The results will provide a basis for the future manipulation of the enzymes' activities. Our other targets, s ....Structural studies of catalysis and electron transfer by copper proteins. We propose to determine the crystal structures of five copper-containing proteins. Three are amine oxidases, enzymes that protect a wide range of organisms against toxic cell products (amines). Novel chemical modifications and crystallographic techniques will be used to test hypotheses for the enzyme mechanism. The results will provide a basis for the future manipulation of the enzymes' activities. Our other targets, sulfocyanin and auracyanin-A, perform essential electron-transfer functions in an archaeon and a photosynthetic bacterium, respectively. The determination of their molecular structures will answer exciting questions about electron transfer in primitive organisms, and about the evolution of copper proteins as biological electron-transfer agents.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0344441
Funder
Australian Research Council
Funding Amount
$390,000.00
Summary
New Generation Metalloenzyme Magnetic Circular Dichroism Spectrometer Systems. Funding is sought to enhance the existing collaborations between UQ, ANU, Sydney and other universities in the study of metal-centred molecules of biological interest through the construction of advanced magnetic circular dichroism (MCD) spectrometers. These facilities will be the best instruments of their kind, and will enable researchers at Australian institutions to enhance the quality of their research and remain ....New Generation Metalloenzyme Magnetic Circular Dichroism Spectrometer Systems. Funding is sought to enhance the existing collaborations between UQ, ANU, Sydney and other universities in the study of metal-centred molecules of biological interest through the construction of advanced magnetic circular dichroism (MCD) spectrometers. These facilities will be the best instruments of their kind, and will enable researchers at Australian institutions to enhance the quality of their research and remain internationally competitive through the application of modern MCD spectroscopic techniques to the study of metal-centred biomolecules. These facilities will drive a number of programs in the area of metalloenzyme and photosystem II research.Read moreRead less
Enzyme Electrochemical Communication. The ways that redox enzymes communicate with an electrochemical electrode are poorly understood and most systems rely on small molecule mediators as electron shuttles to complete the circuit. The few examples where direct (unmediated) enzyme electrochemistry has been achieved have relied on empirical experimental approaches in electrode modification. In this project a rational approach will be taken, starting with a mediated enzyme electrochemical system whi ....Enzyme Electrochemical Communication. The ways that redox enzymes communicate with an electrochemical electrode are poorly understood and most systems rely on small molecule mediators as electron shuttles to complete the circuit. The few examples where direct (unmediated) enzyme electrochemistry has been achieved have relied on empirical experimental approaches in electrode modification. In this project a rational approach will be taken, starting with a mediated enzyme electrochemical system which is then systematically deconstructed to produce a minimal enzyme-electrode that is stabilised by non-covalent forces and functions without a mediator. This rational approach will provide new routes to the direct enzyme electrochemistry of other enzyme systems as yet unexplored.Read moreRead less
Metalloproteins and metalloenzymes. Most of the chemical reactions and physical movements in living systems are carried out by proteins. The information for producing proteins from amino acids is stored in the genes, but many biological processes depend on additional atoms or molecules ('cofactors') that are added to a protein after it is assembled. For example, more than 30% of all proteins contain metal atoms which are essential for their function. We are studying the structures of such meta ....Metalloproteins and metalloenzymes. Most of the chemical reactions and physical movements in living systems are carried out by proteins. The information for producing proteins from amino acids is stored in the genes, but many biological processes depend on additional atoms or molecules ('cofactors') that are added to a protein after it is assembled. For example, more than 30% of all proteins contain metal atoms which are essential for their function. We are studying the structures of such metalloproteins and metalloenzymes so that we can better understand their activities with long term aims of creating new molecules for biotechnology and/or drugs.Read moreRead less