The genomic programming of complex organisms. The project will have far-reaching consequences in medicine, agriculture, biotechnology, engineering, information science and associated industries. It will provide a platform for the rationalization of genetic epidemiology and genetic improvement programs, the development of a wide range of new diagnostics and therapies, the development of new core technologies and practical approaches in genetics and genetic diversity, a framework for advanced gen ....The genomic programming of complex organisms. The project will have far-reaching consequences in medicine, agriculture, biotechnology, engineering, information science and associated industries. It will provide a platform for the rationalization of genetic epidemiology and genetic improvement programs, the development of a wide range of new diagnostics and therapies, the development of new core technologies and practical approaches in genetics and genetic diversity, a framework for advanced genetic engineering, the development of new principles and systems for information storage and transmission, and the design of artificial systems capable of self-referential assembly in other environments.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0882682
Funder
Australian Research Council
Funding Amount
$100,000.00
Summary
The Australasian Pollen and Spore Atlas. The results generated in this project will enhance Australian research capabilities across multiple disciplines by providing access to key knowledge of pollen and spores in our region. A unified approach to the archiving, presentation and accessibility to existing and evolving databases will provide a considerably improved context for identification and knowledge pooling of any given pollen or spore type. This will create a nexus for novel interactions be ....The Australasian Pollen and Spore Atlas. The results generated in this project will enhance Australian research capabilities across multiple disciplines by providing access to key knowledge of pollen and spores in our region. A unified approach to the archiving, presentation and accessibility to existing and evolving databases will provide a considerably improved context for identification and knowledge pooling of any given pollen or spore type. This will create a nexus for novel interactions between researchers and end users of these data from within and beyond Australia's borders.Read moreRead less
Special Research Initiatives - Grant ID: SR0567379
Funder
Australian Research Council
Funding Amount
$110,000.00
Summary
The Australasian Pollen and Spore Atlas. This proposal will enable online accessibility to the largest collection of pollen and spores information in the Australasian region that is currently located at the Australian National University. This will be a searchable database that is accessible over the web and suitable for professional as well as the technical novice involved in pollen and spore identification. Novel approaches to the federation of other smaller existing pollen and spores database ....The Australasian Pollen and Spore Atlas. This proposal will enable online accessibility to the largest collection of pollen and spores information in the Australasian region that is currently located at the Australian National University. This will be a searchable database that is accessible over the web and suitable for professional as well as the technical novice involved in pollen and spore identification. Novel approaches to the federation of other smaller existing pollen and spores databases will result in The Australasian Pollen and Spores Atlas. The Atlas will be a flexible and powerful knowledge management tool applicable to research development by a wide range of users including those within the archaeology, biology, geology, and airborne allergy specialists.Read moreRead less
What is the spatial and environmental distribution of phylogenetic diversity in the Australian biota? Almost nothing is known about the geographic distribution of phylogenetic relationships across Australia at fine resolutions of the order of tens of kilometres. The aim of this research is to map the spatial patterns of phylogenetic diversity in the Australian biota and identify possible environmental controls over them. We will analyse five disparate groups at a spatial resolution that is ord ....What is the spatial and environmental distribution of phylogenetic diversity in the Australian biota? Almost nothing is known about the geographic distribution of phylogenetic relationships across Australia at fine resolutions of the order of tens of kilometres. The aim of this research is to map the spatial patterns of phylogenetic diversity in the Australian biota and identify possible environmental controls over them. We will analyse five disparate groups at a spatial resolution that is orders of magnitude finer than previous research, analysing their relationship with possible environmental controls using advanced spatial analysis methods. The knowledge we will generate about the spatial distribution of these relationships is essential to understand and conserve Australia's unique biodiversity.Read moreRead less
Special Research Initiatives - Grant ID: SR0354610
Funder
Australian Research Council
Funding Amount
$10,000.00
Summary
Australian Bioinformatics Grid Network. OzBioGrid will be an open source, collaborative, bioinformatics environment supporting Australian biotechnology and life science researchers on the Grid. Researchers will be able to use distributed resources including databases, computational power and analytical tools, and to collaborate remotely, using customized work environments. With hubs in Brisbane, Canberra and Melbourne, and nodes elsewhere, OzBioGrid will build on Australia's high performance co ....Australian Bioinformatics Grid Network. OzBioGrid will be an open source, collaborative, bioinformatics environment supporting Australian biotechnology and life science researchers on the Grid. Researchers will be able to use distributed resources including databases, computational power and analytical tools, and to collaborate remotely, using customized work environments. With hubs in Brisbane, Canberra and Melbourne, and nodes elsewhere, OzBioGrid will build on Australia's high performance computing capacity. It will greatly enhance Australia's research capability by networking ARC and other centres of excellence, major national research facilities, independent researchers, biotechnology companies, bioinformatics research centres, public databases. It will be linked to bio-grid initiatives overseas. Read moreRead less
Emergence of robust, stable structures via computation within natural networks. An ever-increasing challenge for modern society is the sheer complexity of vast infrastructures. Unexpected, and sometimes catastrophic, behaviour often emerges from interactions between elements of large systems. As a result, highly complex systems such as the Internet, international finance markets, and power grids are highly susceptible to costly problems such as cascading failures, inefficiency, and critical sens ....Emergence of robust, stable structures via computation within natural networks. An ever-increasing challenge for modern society is the sheer complexity of vast infrastructures. Unexpected, and sometimes catastrophic, behaviour often emerges from interactions between elements of large systems. As a result, highly complex systems such as the Internet, international finance markets, and power grids are highly susceptible to costly problems such as cascading failures, inefficiency, and critical sensitivity. High-tech industries, such as biotechnology and information networking, also face problems in coordinating swarms of interacting agents. This project will contribute to solving such problems by identifying and adapting solutions from nature.Read moreRead less
Dual phase evolution in networks. A grand challenge for modern society is the sheer complexity of vast networks arising from organizations and infrastructures. Unexpected, sometimes catastrophic, behaviour often emerges from interactions within such systems. As a result, the Internet, financial markets, power grids and other vital infrastructures are susceptible to costly problems such as cascading failures, inefficiency, and unpredictability. High-tech industries, such as biotechnology and info ....Dual phase evolution in networks. A grand challenge for modern society is the sheer complexity of vast networks arising from organizations and infrastructures. Unexpected, sometimes catastrophic, behaviour often emerges from interactions within such systems. As a result, the Internet, financial markets, power grids and other vital infrastructures are susceptible to costly problems such as cascading failures, inefficiency, and unpredictability. High-tech industries, such as biotechnology and information networking, face problems in coordinating networks of interacting agents. This project will expand the horizon of complex systems by deriving the design principles underpinning stable and resilient network structures and validate these principles on real world networks.Read moreRead less
Automated bioinformatic analysis of vertical and lateral gene transmission among microbial genomes. Genetic information is transmitted "vertically" from parents to offspring within species. Biologists have long assumed that this mechanism, extrapolated far into the past, explains the distribution of genes among genomes, thus the potential properties of all phenomes. But genome sequences show that some, perhaps many, genes have been transmitted "laterally" between species. We are building a uniqu ....Automated bioinformatic analysis of vertical and lateral gene transmission among microbial genomes. Genetic information is transmitted "vertically" from parents to offspring within species. Biologists have long assumed that this mechanism, extrapolated far into the past, explains the distribution of genes among genomes, thus the potential properties of all phenomes. But genome sequences show that some, perhaps many, genes have been transmitted "laterally" between species. We are building a unique automated computer-based system to find all instances of lateral transmission in all microbial genomes, using rigorous methods. Our results will be important both fundamentally and practically, e.g. in explaining sets and dynamics of phenomic traits, and quantifying background levels of "natural genetic engineering".Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0989334
Funder
Australian Research Council
Funding Amount
$400,000.00
Summary
An integrated high-performance computational platform powering systems biology investigation. Systems biology is the study of the organism as a whole and provides a deeper understanding of biological processes than is possible by studying components separately. Recognised as essential for biological research, we propose to establish an advanced computational platform to study these processes at a systems level. Its hardware and specialised software will allow Australian researchers to examine co ....An integrated high-performance computational platform powering systems biology investigation. Systems biology is the study of the organism as a whole and provides a deeper understanding of biological processes than is possible by studying components separately. Recognised as essential for biological research, we propose to establish an advanced computational platform to study these processes at a systems level. Its hardware and specialised software will allow Australian researchers to examine complex pathways involved in animal and human health and disease, as well as in biotechnology and environmental processes. It will provide unique capabilities not currently available in Australia, and help Australian researchers remain internationally competitive in breakthrough science and frontier technologies.Read moreRead less
Understanding how the primate brain processes visual information. Being able to see is a crucial aspect of our daily lives, which happens so effortlessly that it tends to be taken for granted. In comparison with other animals and artificial systems, the primate visual cortex is unsurpassed in its capacity to interpret complex and dynamic environments, in a manner that is fast and computationally robust. Discovering how this happens in terms of interactions between cells in the brain can help us ....Understanding how the primate brain processes visual information. Being able to see is a crucial aspect of our daily lives, which happens so effortlessly that it tends to be taken for granted. In comparison with other animals and artificial systems, the primate visual cortex is unsurpassed in its capacity to interpret complex and dynamic environments, in a manner that is fast and computationally robust. Discovering how this happens in terms of interactions between cells in the brain can help us design more efficient artificial systems capable of vision. This in turn can have profound implications for the creation of new technologies such as artificial eyes, autonomous robots, and intelligent sensors, and may also result in future benefits for medical science.Read moreRead less