Linkage Infrastructure, Equipment And Facilities - Grant ID: LE110100068
Funder
Australian Research Council
Funding Amount
$240,000.00
Summary
Mass spectrometry platform for high throughput genotyping, epigenetic analysis and validation of genome wide sequencing studies. This facility will provide a platform for Australian researchers to quantitatively measure genetic information in a rapid, accurate and cost-efficient manner. This technology will enhance Australia's ability to perform basic research into the genetic and epigenetic mechanisms of cellular function.
From genotype to phenotype: Molecular photofitting for criminal investigations. DNA found at crime scenes has the potential to provide a physical description of the donor in the same way as an eyewitness statement can be used to make a facial reconstruction. This project will investigate those physical traits which can be derived from the analysis of DNA present in samples collected in relation to criminal activities.
How enhancers regulate T cell differentiation and function. This project aims to identify the molecular mechanisms that regulate the activity of transcriptional enhancers needed for effective immune cell differentiation. Adaptive immune cell activation starts a programme of differentiation that acquires and maintains lineage-specific effector function. Using a multidisciplinary approach including cellular and chromatin biology, advanced bioinformatics, targeted genome editing and nanotechnology, ....How enhancers regulate T cell differentiation and function. This project aims to identify the molecular mechanisms that regulate the activity of transcriptional enhancers needed for effective immune cell differentiation. Adaptive immune cell activation starts a programme of differentiation that acquires and maintains lineage-specific effector function. Using a multidisciplinary approach including cellular and chromatin biology, advanced bioinformatics, targeted genome editing and nanotechnology, this project expects to provide insights into non-coding regulatory element reprogramming and control of immune cell function and memory with implications for understanding general cellular differentiation.Read moreRead less
The role of short tandem repeat DNA variation in the evolution of human psychological diversity. The proposed work addresses fundamental questions about human nature. It ties together the evolutionary processes that have shaped us as a species with the way our genes influence: our personalities, the way we think and how we behave. It introduces a novel approach to addressing questions about the role of genetics in human variation that will contribute substantially to the way we understand, perce ....The role of short tandem repeat DNA variation in the evolution of human psychological diversity. The proposed work addresses fundamental questions about human nature. It ties together the evolutionary processes that have shaped us as a species with the way our genes influence: our personalities, the way we think and how we behave. It introduces a novel approach to addressing questions about the role of genetics in human variation that will contribute substantially to the way we understand, perceive and manage important aspects of human diversity.Read moreRead less
Photosynthetic traits as “key performance indicators” of coral health. The objective of this project is to advance knowledge on the healthy functioning of the coral–algal symbiosis, which defines the response of coral reef ecosystems to worldwide environmental change. Current approaches to address this problem have linked coral health to algal symbiont diversity but have been unable to resolve the fundamental symbiont functional traits that govern this link – the “key performance indicators (KPI ....Photosynthetic traits as “key performance indicators” of coral health. The objective of this project is to advance knowledge on the healthy functioning of the coral–algal symbiosis, which defines the response of coral reef ecosystems to worldwide environmental change. Current approaches to address this problem have linked coral health to algal symbiont diversity but have been unable to resolve the fundamental symbiont functional traits that govern this link – the “key performance indicators (KPIs)”. This project plans to couple advanced physiological and functional genomics techniques to transform our understanding of how algal symbiont metabolic KPIs regulate coral growth and stress susceptibility. This may provide new diagnostic capability for the assessment of coral health and may enable us to improve coral reef ecosystem management.Read moreRead less
Diversity out of a hybrid zone: the interplay of reinforcement and sexual selection in the formation of new species. How are there so many different species? Understanding how new species arise is a fundamental question because it explains current biodiversity and reveals the processes that will continue to give rise to new species in the future. An integral part of any animal species is who they choose to mate with, but how mate choice evolves to create new species remains poorly understood. He ....Diversity out of a hybrid zone: the interplay of reinforcement and sexual selection in the formation of new species. How are there so many different species? Understanding how new species arise is a fundamental question because it explains current biodiversity and reveals the processes that will continue to give rise to new species in the future. An integral part of any animal species is who they choose to mate with, but how mate choice evolves to create new species remains poorly understood. Here I will be studying the processes that affect the evolution of mate choice in an Australian rainforest frog hybrid zone. This system is uniquely suitable for providing internationally important insights into the evolutionary processes that form new species.Read moreRead less
The Epigenetics of Sex in the Dragon. Genetic codes do not directly translate to phenotypes -- environment acts through epigenetics to modify development. We use advanced molecular techniques to examine how epigenetics responds to temperature to reverse sex in our novel animal model, the dragon lizard. How does the cell sense temperature? Once the extrinsic signal is captured, how does it influence chromatin modification to release or suppress key genes in the sex differentiation pathway? Which ....The Epigenetics of Sex in the Dragon. Genetic codes do not directly translate to phenotypes -- environment acts through epigenetics to modify development. We use advanced molecular techniques to examine how epigenetics responds to temperature to reverse sex in our novel animal model, the dragon lizard. How does the cell sense temperature? Once the extrinsic signal is captured, how does it influence chromatin modification to release or suppress key genes in the sex differentiation pathway? Which sex genes are targets? Epigenetic enzymes are astonishingly conserved, providing exciting opportunities to draw from human systems to unravel novel signatures of temperature-induced sex switching in reptiles. This project will advance knowledge of developmental programming generally.Read moreRead less
Systemic gene silencing in Arabidopsis, and relevance to plant biology. Gene silencing is a highly conserved process in plants and animals. It is of fundamental importance to gene regulation, virus defence, genome response to environment, and genome evolution. Remarkably, when gene silencing is triggered in plants it can spread throughout the organism. The aim of this project is to define the mechanism of intercellular movement of gene silencing in plants, and its relevance to plant growth and d ....Systemic gene silencing in Arabidopsis, and relevance to plant biology. Gene silencing is a highly conserved process in plants and animals. It is of fundamental importance to gene regulation, virus defence, genome response to environment, and genome evolution. Remarkably, when gene silencing is triggered in plants it can spread throughout the organism. The aim of this project is to define the mechanism of intercellular movement of gene silencing in plants, and its relevance to plant growth and defence against pathogens. Expected outcomes include increased understanding of intercellular genetic signalling in plants and its role in plant growth and disease resistance. The findings may also shed new light on mechanisms of gene silencing in animals.Read moreRead less
Is there a climatic tipping point for Antarctic Bottom Water formation? Antarctic Bottom Water plays an important role in global ocean circulation and climate and yet its formation is also highly sensitive to climate change. This project will analyse new seafloor, core and water samples from the understudied Cape Darnley, East Antarctica, collected on a voyage in early 2022. This new data will be used in combination with an improved high resolution regional ocean model, to understand modern and ....Is there a climatic tipping point for Antarctic Bottom Water formation? Antarctic Bottom Water plays an important role in global ocean circulation and climate and yet its formation is also highly sensitive to climate change. This project will analyse new seafloor, core and water samples from the understudied Cape Darnley, East Antarctica, collected on a voyage in early 2022. This new data will be used in combination with an improved high resolution regional ocean model, to understand modern and past Antarctic Bottom Water formation under different climate states (warmer and colder than present), to determine if there are climate tipping points for the shut down of Antarctic Bottom Water formation. The anticipated benefits include a better understanding of future climate change on this important water mass.Read moreRead less
The big flood: will it happen again? If we could better predict the frequency of extreme flood events, would we be better prepared to safeguard human lives and settlements? This project provides a time-line of flood activity in the south east Queensland region extending back thousands of years using state-of-the-art dating techniques and seeks to identifiy those settlements most at risk.