Rnomics - The Role of Introns and Other Noncoding RNAs in the Evolution and Development of Complex Organisms. Approximately 98% of the transcriptional output of the human genome is noncoding RNA. The aims of the project are to (a) provide direct evidence that introns contain functional information and are part of an RNA-based regulatory network, (b) identify large numbers of new noncoding RNAs and substantiate the conclusion that noncoding RNAs genes are common in eukaryotic genomes, and (c) pr ....Rnomics - The Role of Introns and Other Noncoding RNAs in the Evolution and Development of Complex Organisms. Approximately 98% of the transcriptional output of the human genome is noncoding RNA. The aims of the project are to (a) provide direct evidence that introns contain functional information and are part of an RNA-based regulatory network, (b) identify large numbers of new noncoding RNAs and substantiate the conclusion that noncoding RNAs genes are common in eukaryotic genomes, and (c) provide supporting evidence that the higher eukaryotes have evolved a second tier of gene expression based on RNA. The project has the capacity to transform our understanding of genetic programming in the higher organisms, with considerable scientific and practical implications.Read moreRead less
Evolution of nervous system patterning processes: characterisation of homologs of key Drosophila regulatory genes from the coral Acropora. Defining the common mechanisms of nervous system development is one of the major goals of modern biology, but is presently being addressed largely by comparisons between a few very advanced (and therefore specialised) animals. Comparative data from a lower animal is urgently needed, and will clarify many aspects of nervous system evolution and development. Th ....Evolution of nervous system patterning processes: characterisation of homologs of key Drosophila regulatory genes from the coral Acropora. Defining the common mechanisms of nervous system development is one of the major goals of modern biology, but is presently being addressed largely by comparisons between a few very advanced (and therefore specialised) animals. Comparative data from a lower animal is urgently needed, and will clarify many aspects of nervous system evolution and development. The pioneering work carried out on Acropora in this laboratory suggests that it is perhaps the best choice currently available for this purpose. This project will use Acropora to address fundamental questions about the evolution of nervous system developmental processes.Read moreRead less
Characterising genetic variation in Brassica napus. Applying the latest scientific advances supports society through promoting a knowledge based economy, as well as through securing agricultural productivity and biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian agricultural, biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national ....Characterising genetic variation in Brassica napus. Applying the latest scientific advances supports society through promoting a knowledge based economy, as well as through securing agricultural productivity and biomedical applications. Establishing these methods places Australia at the forefront of genomics technology with direct applications for Australian agricultural, biomedical and biotechnology industries. Maintaining agricultural production in an unreliable environment remains a national challenge, both for rural and urban communities. This technology will provide a detailed understanding of crop genome variation in relation to agronomic traits and lead to the development of crops that are better suited to the Australian climate, supporting a sustainable agricultural industry.Read moreRead less
Origin of multicellularity in animals: identification and analysis of intercellular signalling pathways in a basal metazoan, the demosponge Reniera. The Reniera genome project is a multi-million dollar collaboration between JGI (US-DOE) and Australian scientists that will see the sequencing of the first Australian marine animal by 2006. This project will significantly advance our understanding of the origins of animals and contribute to the reconstruction of creatures that lived over 600 million ....Origin of multicellularity in animals: identification and analysis of intercellular signalling pathways in a basal metazoan, the demosponge Reniera. The Reniera genome project is a multi-million dollar collaboration between JGI (US-DOE) and Australian scientists that will see the sequencing of the first Australian marine animal by 2006. This project will significantly advance our understanding of the origins of animals and contribute to the reconstruction of creatures that lived over 600 million years ago. A major outcome of this reconstruction will be a fundamental understanding of how cells communicate with each other during the process of development to give rise to the diversity of cell types within multicellular animals. This study will also shed light on what happens when cell communication goes astray, as observed in a range of human malignancies, including cancer. Read moreRead less
Evolutionary genetics of the immune system in social insects. Insects possess efficient innate immunity against pathogens, but social insects are suggested to be vulnerable due to their packed colonies of related individuals. We predict that pathogen pressure varies with life history and microhabitat details, and that this variation will be reflected in the molecular evolutionary rates of immune system genes. Sequence information will be obtained to test these predictions. The results should ....Evolutionary genetics of the immune system in social insects. Insects possess efficient innate immunity against pathogens, but social insects are suggested to be vulnerable due to their packed colonies of related individuals. We predict that pathogen pressure varies with life history and microhabitat details, and that this variation will be reflected in the molecular evolutionary rates of immune system genes. Sequence information will be obtained to test these predictions. The results should be of widespread interest as reflecting the importance of pathogens and life pattern, and increase our knowledge of insect immune systems, potentially enabling circumvention of pest defenses and better protection of beneficial species.Read moreRead less
Evolutionary immunology of social insects. Social insects are particularly abundant in Australia. They live in a wide range of habitats with social systems differing greatly in size and structure. They are both ecologically and economically important because they form a large part of terrestrial ecosystems and control much of the energy flow. Their immune system resembles the immune system of humans. Finding how the social insect immune system evolves will have the potential to help us manag ....Evolutionary immunology of social insects. Social insects are particularly abundant in Australia. They live in a wide range of habitats with social systems differing greatly in size and structure. They are both ecologically and economically important because they form a large part of terrestrial ecosystems and control much of the energy flow. Their immune system resembles the immune system of humans. Finding how the social insect immune system evolves will have the potential to help us manage them better, and yield functional insights into the human innate immune system. Placing the observed patterns in context also involves study of the associated microbes, finds how social insects interact with this important part of the environment, and may assist in land management.Read moreRead less
Evolving enzymes to harness the clean energy reserves of nature. We want to improve enzymes that are used by nature to harness huge amounts of energy - the energy present in glucose, one of the most abundant materials in the biosphere. The enzymes will be evolved to efficiently produce biological power in a practically useable form rather than for the growth of the organisms from which they originated. We will use this energy to drive the synthesis of chemicals of practical value, truly green ch ....Evolving enzymes to harness the clean energy reserves of nature. We want to improve enzymes that are used by nature to harness huge amounts of energy - the energy present in glucose, one of the most abundant materials in the biosphere. The enzymes will be evolved to efficiently produce biological power in a practically useable form rather than for the growth of the organisms from which they originated. We will use this energy to drive the synthesis of chemicals of practical value, truly green chemistry. We also seek to answer questions such as: how do proteins evolve, how do enzymes work and how can biochemical pathways be optimised for industrial processes? This information will be of fundamental benefit for the use of enzymes in green chemistry, providing cleaner ways to produce important chemicals. Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0347875
Funder
Australian Research Council
Funding Amount
$280,000.00
Summary
Enhanced genetic analysis facilities at James Cook University. The acquisition of molecular data, DNA sequences or allele frequencies, is the major requirement of almost all laboratory research in the life sciences, and is the rate-limiting step for many research projects locally. The current application underpins novel research initiatives at James Cook University, and is intended to provide centralized state-of-the-art high throughput DNA sequencing and genotyping facility for the north Queens ....Enhanced genetic analysis facilities at James Cook University. The acquisition of molecular data, DNA sequences or allele frequencies, is the major requirement of almost all laboratory research in the life sciences, and is the rate-limiting step for many research projects locally. The current application underpins novel research initiatives at James Cook University, and is intended to provide centralized state-of-the-art high throughput DNA sequencing and genotyping facility for the north Queensland life sciences community.Read moreRead less