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Linking genes with the phenotype - creation of a genetic linkage map for the silver-lipped pearl oyster Pinctada maxima. R&D undertaken in this project will increase our fundamental understanding of the role genetics plays in production of a premium quality cultured South Sea pearl. When utilised in future selective breeding programs aimed at improving pearl quality traits the information generated will allow Australian pearling companies to be more productive and to maintain a competitive advan ....Linking genes with the phenotype - creation of a genetic linkage map for the silver-lipped pearl oyster Pinctada maxima. R&D undertaken in this project will increase our fundamental understanding of the role genetics plays in production of a premium quality cultured South Sea pearl. When utilised in future selective breeding programs aimed at improving pearl quality traits the information generated will allow Australian pearling companies to be more productive and to maintain a competitive advantage over their rivals. Many rural communities are dependent on pearling companies for their economic prosperity and community identity. Consequently, positive growth of the pearl industry as a result of the proposed R&D will greatly benefit the economic and social wealth of these rural populations.Read moreRead less
Between a hot place & hypoxia: Quantifying fish-kill risk in inland rivers. Native fish populations in Australian ephemeral rivers are highly valued but are subject to widespread decline. During drought waterholes serve as critical refuges for native fish, however thermal extremes and hypoxia (lack of oxygen) have led to regular fish-kill events. Whilst we know the general conditions that lead to fish-kills, we do not have a clear understanding of why some species are more tolerant than others, ....Between a hot place & hypoxia: Quantifying fish-kill risk in inland rivers. Native fish populations in Australian ephemeral rivers are highly valued but are subject to widespread decline. During drought waterholes serve as critical refuges for native fish, however thermal extremes and hypoxia (lack of oxygen) have led to regular fish-kill events. Whilst we know the general conditions that lead to fish-kills, we do not have a clear understanding of why some species are more tolerant than others, or how we can help decision-makers anticipate fish-kill risks. This project will combine laboratory ecophysiology investigations and novel field monitoring techniques to develop a next-generation fish habitat model for stakeholders to use to assess fish-kill risks and plan for restoration. Read moreRead less
Seeing without eyes: the evolution of non-visual photoreceptors in vertebrates. Australia's underwater biodiversity is second to none with endemic species representing the earliest stages in vertebrate evolution, many of them relying heavily on vision for survival. Tracing the evolution of light detection and image formation will provide crucial information about the lifestyles of our vertebrate ancestors, the environmental selection pressures driving speciation and colour communication. Charact ....Seeing without eyes: the evolution of non-visual photoreceptors in vertebrates. Australia's underwater biodiversity is second to none with endemic species representing the earliest stages in vertebrate evolution, many of them relying heavily on vision for survival. Tracing the evolution of light detection and image formation will provide crucial information about the lifestyles of our vertebrate ancestors, the environmental selection pressures driving speciation and colour communication. Characterisation of optimal light environments and extra-ocular light detection will also help protect and manage endemic species in wild and captive environments. Read moreRead less
Fertility crisis: harnessing the genomic tension behind pollen fertility in sorghum. Hybrid sorghum varieties yield more grain than inbred varieties but the production seed for farmers can be difficult. This project will identify the genes responsible for a trait that makes hybrid seed production possible and this knowledge will help raise sorghum yields in Australian and in some of the world’s poorest countries.
Digging deeper to improve yield stability. This project aims to provide innovative breeding solutions that harness the ‘hidden’ part of the plant, roots, to support the development of more productive crops in the face of climate variability. The project expects to generate new insights into the biology and genetics of root development in barley, a model cereal crop, by applying cutting-edge genome editing, phenotyping and genomics technologies. Anticipated outcomes include novel methodologies to ....Digging deeper to improve yield stability. This project aims to provide innovative breeding solutions that harness the ‘hidden’ part of the plant, roots, to support the development of more productive crops in the face of climate variability. The project expects to generate new insights into the biology and genetics of root development in barley, a model cereal crop, by applying cutting-edge genome editing, phenotyping and genomics technologies. Anticipated outcomes include novel methodologies to accelerate breeding for diverse production environments, with direct applications in barley, and other major cereals including wheat and oats. This should provide significant economic and social benefits to the Australian grains industry through yield stability amidst climate variability.Read moreRead less
Unlocking the genetic and biochemical potential of kangaroo paws. Using cutting-edge gene technology and an interdisciplinary approach, this project aims to uncover the genes responsible for flower colour in the iconic kangaroo paws of Western Australia, and identify the compounds that produce the colours. The project expects to produce the first entire kangaroo paw genome and identify unique genetic variants and biochemicals underlying colour differences. This new knowledge should help horticul ....Unlocking the genetic and biochemical potential of kangaroo paws. Using cutting-edge gene technology and an interdisciplinary approach, this project aims to uncover the genes responsible for flower colour in the iconic kangaroo paws of Western Australia, and identify the compounds that produce the colours. The project expects to produce the first entire kangaroo paw genome and identify unique genetic variants and biochemicals underlying colour differences. This new knowledge should help horticultural programs to more easily breed varieties with desirable and highly marketable new colours, and could assist in conserving these amazing Australian plants.Read moreRead less
Fisheries genomics of snapper in Australia and New Zealand Waters. This industry-driven project aims to assemble a strategic research alliance to generate and apply knowledge to a highly significant fisheries resource. It involves collaboration between the five major state government fisheries agencies in Australia, the New Zealand’s Crown Research Institute for seafood and two Australian labs with leadership in fish genetics and genomics. It expects to generate and integrate genomic, environmen ....Fisheries genomics of snapper in Australia and New Zealand Waters. This industry-driven project aims to assemble a strategic research alliance to generate and apply knowledge to a highly significant fisheries resource. It involves collaboration between the five major state government fisheries agencies in Australia, the New Zealand’s Crown Research Institute for seafood and two Australian labs with leadership in fish genetics and genomics. It expects to generate and integrate genomic, environmental and phenotypic datasets for snapper populations from across vast coastal regions of the two countries. The outcomes should substantially enhance intra- and inter-jurisdictional fisheries management and aquaculture initiatives, providing commercial, social and environmental benefits for many stakeholders.Read moreRead less
Establishing genetic guidelines for the effective ecological restoration of seagrass meadows. Industry and coastal development in Australia are of national importance for economic growth and prosperity, but they threaten benthic habitats, like seagrasses. Loss of seagrass meadows without mitigation results in greater coastal impacts from damaging storms and waves and a reduction in the health and productivity of marine environments globally. Thus the ecological restoration of seagrass meadows is ....Establishing genetic guidelines for the effective ecological restoration of seagrass meadows. Industry and coastal development in Australia are of national importance for economic growth and prosperity, but they threaten benthic habitats, like seagrasses. Loss of seagrass meadows without mitigation results in greater coastal impacts from damaging storms and waves and a reduction in the health and productivity of marine environments globally. Thus the ecological restoration of seagrass meadows is an urgent national priority action that involves industry, government and the community. Through the detailed assessment of population genetic variation and key population processes in seagrasses, this project will establish genetic guidelines for a more effective seagrass restoration industry.Read moreRead less
Kruppel-like factors and the methylome. This project aims to test the hypothesis that the KLF/SP family of transcription factors work in part via dynamic interactions with methylated cytosine nucleotides in DNA. This is fundamental to their function as pioneer factors in reprograming and their ability to co-ordinate differentiation and organogenesis. Conversely, dynamic changes in methylation status engage or disengage new regulatory elements in the genome via recruitment of KLF/SP family protei ....Kruppel-like factors and the methylome. This project aims to test the hypothesis that the KLF/SP family of transcription factors work in part via dynamic interactions with methylated cytosine nucleotides in DNA. This is fundamental to their function as pioneer factors in reprograming and their ability to co-ordinate differentiation and organogenesis. Conversely, dynamic changes in methylation status engage or disengage new regulatory elements in the genome via recruitment of KLF/SP family proteins as specific effectors. This project will address a new paradigm in genetics that is likely to underpin development.Read moreRead less
ARC/NHMRC Research Network in Genes and Environment in Development. Interactions between the early environment and the genetic regulatory program of the developing organism have major consequences for the lifetime health of individuals. The primary objective of the Network in Genes and Environment in Development is to harness the resources of leading researchers from the currently distinct disciplines of developmental biology and developmental physiology to define key developmental regulatory ne ....ARC/NHMRC Research Network in Genes and Environment in Development. Interactions between the early environment and the genetic regulatory program of the developing organism have major consequences for the lifetime health of individuals. The primary objective of the Network in Genes and Environment in Development is to harness the resources of leading researchers from the currently distinct disciplines of developmental biology and developmental physiology to define key developmental regulatory networks and to address how environmental factors impinge on these regulatory networks. The formation of this National Research Network is unique, timely and strategic. It will generate new insights into the mechanisms by which events in early life determine the risk of adverse outcomes in perinatal and adult life.Read moreRead less