Sex chromosomes and speciation: chromosome inversion and the large Z-effect. This project aims to understand the divergence of species and the importance of two genomic features of often disproportionately large effect between young taxa – the sex chromosomes, and chromosome inversions. The research will integrate genomics and transcriptomics with the study of traits closely aligned to speciation in birds – song, colour, and sperm morphology and protein composition. The project will provide sign ....Sex chromosomes and speciation: chromosome inversion and the large Z-effect. This project aims to understand the divergence of species and the importance of two genomic features of often disproportionately large effect between young taxa – the sex chromosomes, and chromosome inversions. The research will integrate genomics and transcriptomics with the study of traits closely aligned to speciation in birds – song, colour, and sperm morphology and protein composition. The project will provide significant benefits such as enhancing Australia’s strength in the field of evolutionary biology.Read moreRead less
Explaining virus diversity. To prevent virus pandemics, it is necessary to understand how viruses evolve. This project aims to reveal the long-term trends, processes and drivers of RNA virus diversity and evolution. Through the metagenomic sequencing of the viromes of Australian animals that mark evolutionary innovations and transitions this project will reshape our knowledge of virus evolution and disease emergence. Expected outcomes will be a new understanding of how virus diversity is created ....Explaining virus diversity. To prevent virus pandemics, it is necessary to understand how viruses evolve. This project aims to reveal the long-term trends, processes and drivers of RNA virus diversity and evolution. Through the metagenomic sequencing of the viromes of Australian animals that mark evolutionary innovations and transitions this project will reshape our knowledge of virus evolution and disease emergence. Expected outcomes will be a new understanding of how virus diversity is created, how virus phenotypes have changed through time, how often viruses jump to new host species, and how major events in animal evolution have shaped virus diversity. Key benefits include new measures of the viral burden faced by Australia’s native animals and of ecosystem health.Read moreRead less
The genetic architecture of colour polymorphism and speciation. Speciation, the process by which populations diverge and become distinct, is the engine that drives biodiversity and Darwin's 'mystery of mysteries'. Speciation is accelerated in species with multiple, discrete, coexisting colour forms; yet the genetic mechanisms underpinning this pattern are not known. This project aims to identify the genes underlying different colour forms and how they are distributed across the genome. The proj ....The genetic architecture of colour polymorphism and speciation. Speciation, the process by which populations diverge and become distinct, is the engine that drives biodiversity and Darwin's 'mystery of mysteries'. Speciation is accelerated in species with multiple, discrete, coexisting colour forms; yet the genetic mechanisms underpinning this pattern are not known. This project aims to identify the genes underlying different colour forms and how they are distributed across the genome. The project plans to test the prediction that these same areas of the genome show marked divergence between lineages that are in the process of becoming distinct species. Doing so may contribute significantly to our understanding of speciation, underlying genetic mechanisms, and genes generating colour variation in vertebrates.Read moreRead less
Reconstructing the evolution of climatic tolerances in conifers. This project aims to trace the evolution of climate tolerance in conifers by combining evidence from fossils, phylogenies, physiology and mathematics. The project plans to use innovative methods to overcome the biases in methods currently used to trace evolutionary change. The project plans to integrate data from three sources: the global fossil record, new models of current climatic tolerances of conifers, and mathematical simulat ....Reconstructing the evolution of climatic tolerances in conifers. This project aims to trace the evolution of climate tolerance in conifers by combining evidence from fossils, phylogenies, physiology and mathematics. The project plans to use innovative methods to overcome the biases in methods currently used to trace evolutionary change. The project plans to integrate data from three sources: the global fossil record, new models of current climatic tolerances of conifers, and mathematical simulations of how and when methods of reconstructing ancestral ecology fail. The combined results should show how this important group of organisms has responded to past climate change and how they will respond in the future. It should also provide improved estimates of past terrestrial climates.Read moreRead less
Recombination and the genomic landscape of speciation. This project aims to evaluate how genomes become different during the origin of species by utilising an innovative system where multiple replicates of the speciation process exist. This project expects to generate knowledge in the area of speciation genetics by exploring the effects of sex, migration and selection on the diversity of hundreds of genomes from an Australian wildflower. Expected outcomes of this project include a deeper underst ....Recombination and the genomic landscape of speciation. This project aims to evaluate how genomes become different during the origin of species by utilising an innovative system where multiple replicates of the speciation process exist. This project expects to generate knowledge in the area of speciation genetics by exploring the effects of sex, migration and selection on the diversity of hundreds of genomes from an Australian wildflower. Expected outcomes of this project include a deeper understanding of the maintenance of genetic diversity in natural populations, and development of a model organism for studying the genetics and ecology of speciation. This project should provide significant benefits including enhanced capacity in evolutionary genetics in Australia.Read moreRead less
The Eocene high latitude Australasian 'tropics' in a changing climate: resolving conflicting evidence. Between 45 to 30 million years ago, high latitude subtropical floras in Australia and New Zealand experienced significant climate change, leading to the evolution of present day vegetation. Understanding the effects of this climate change on extinction and speciation will produce more accurate predictions about modern floras when faced with climate change.
Evolution in action or the demise of iconic Australian flora? The project aims to investigate the evolutionary history and conservation status of a group of closely related Grevillea species, in the light of increasing pressure from landscape modification. This project will incorporate leading methodologies for massively parallel sequencing, pollinator preference and breeding capacity in order to detect the patterns and processes underpinning divergence in widely distributed species. A phylogene ....Evolution in action or the demise of iconic Australian flora? The project aims to investigate the evolutionary history and conservation status of a group of closely related Grevillea species, in the light of increasing pressure from landscape modification. This project will incorporate leading methodologies for massively parallel sequencing, pollinator preference and breeding capacity in order to detect the patterns and processes underpinning divergence in widely distributed species. A phylogenetic framework will provide the evolutionary relationships among taxa. This project is expected to inform requirements for long-term species persistence and, for threatened species within the group, guide the decision making of biodiversity managers as to what actions are required and where best to invest limited funds.Read moreRead less
Meta-modelling of ecological, evolutionary and climatic systems dynamics. This project aims to improve forecasts of the response of biodiversity to future climate change and so improve on-ground conservation management. Using dynamic systems modelling, tested against field data from a wide variety of case studies, the project models will integrate a variety of biological and geophysical inputs to produce more realistic forecasts of change.
Generalised methods for testing extinction dynamics across geological, near and modern time scales. The record of extinctions over deep time is patchy and incomplete, yet we must use it to determine how major changes in past environments have shaped life on Earth today. The project will develop cutting-edge mathematical tools to determine the patterns of extinctions and speciation over geological time to help predict our uncertain environmental future.
Mitonuclear incompatibility, speciation, and the Z sex chromosome. This project will characterise the interaction between the mitochondrial and nuclear genome in several species and its contribution to the divergence of species. This interaction is at the heart of energy transformation and storage in all animals and its importance to evolution is yet to be fully understood. The research will provide insight into speciation processes by focusing on recent divergence in Australian finch species. W ....Mitonuclear incompatibility, speciation, and the Z sex chromosome. This project will characterise the interaction between the mitochondrial and nuclear genome in several species and its contribution to the divergence of species. This interaction is at the heart of energy transformation and storage in all animals and its importance to evolution is yet to be fully understood. The research will provide insight into speciation processes by focusing on recent divergence in Australian finch species. We will integrate genomics, bioenergetics, and whole organismal performance in growth, mobility and reproduction by studying birds in the wild and the laboratory. An overarching aim is to unite data from genomics, phenotype and physiology to understand the forces underlying the evolution of species, and biodiversityRead moreRead less