The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molec ....The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molecular evolution between the X-chromosome and autosomes. Utilising Australia’s endemic mammalian fauna as a tractable model system, I will link population processes with macro-evolutionary outcomes to show how genome architecture underpins biodiversity.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE150101720
Funder
Australian Research Council
Funding Amount
$386,923.00
Summary
Pollination by sexual deception and the evolution of specialisation. Specialised pollination systems are of global scientific importance because they offer unique insights into speciation and are exceptionally vulnerable to anthropogenic change. Fundamental gaps remain in our knowledge of the adaptations required for specialisation, the ecological processes favouring its evolution, and whether specialisation facilitates or constrains floral evolution. This project aims to address these questions ....Pollination by sexual deception and the evolution of specialisation. Specialised pollination systems are of global scientific importance because they offer unique insights into speciation and are exceptionally vulnerable to anthropogenic change. Fundamental gaps remain in our knowledge of the adaptations required for specialisation, the ecological processes favouring its evolution, and whether specialisation facilitates or constrains floral evolution. This project aims to address these questions in a unique and diverse group of Australian orchids that are pollinated by sexual mimicry. This work will apply experimental, ecological and phylogenetic approaches to understand the visual and chemical adaptations to sexual mimicry and their consequences for species diversification, floral evolution and conservation.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE150101904
Funder
Australian Research Council
Funding Amount
$385,481.00
Summary
Interactions of sexual selection & ecological divergence during speciation. Understanding the processes driving speciation is fundamental to understanding how biodiversity is generated. The two main forces underlying speciation, ecological divergence and sexual selection, are well characterised, yet how they interact during the speciation process is remarkably poorly understood. This project aims to test hypotheses regarding how ecological divergence and sexual selection interact during speciati ....Interactions of sexual selection & ecological divergence during speciation. Understanding the processes driving speciation is fundamental to understanding how biodiversity is generated. The two main forces underlying speciation, ecological divergence and sexual selection, are well characterised, yet how they interact during the speciation process is remarkably poorly understood. This project aims to test hypotheses regarding how ecological divergence and sexual selection interact during speciation, from its inception to its completion. In doing so, this research aims to identify genomic regions underlying divergence in colour patterns, which are important for ecological and sexual interactions. Consequently, this project will significantly enhance our understanding of ecological and genetic mechanisms underlying speciation.Read moreRead less
Efficient phylogenetic methods that manage the curse of genomic complexity. This project aims to develop new methods and software to infer the evolutionary history of organisms using genomic data. These new phylogenomic methods need to take account of the complexity of evolutionary processes and/or patterns in time (along the evolutionary tree) and space (along the genome). This project is significant because these methods must merge mathematics and statistics with High-Performance Computing to ....Efficient phylogenetic methods that manage the curse of genomic complexity. This project aims to develop new methods and software to infer the evolutionary history of organisms using genomic data. These new phylogenomic methods need to take account of the complexity of evolutionary processes and/or patterns in time (along the evolutionary tree) and space (along the genome). This project is significant because these methods must merge mathematics and statistics with High-Performance Computing to handle the huge quantities of genetic data and the complexity of evolution itself. An important expected outcome of this project will be the development and release of freely-available software that incorporates these new methods. This project expects to benefit scientists who need to infer phylogenies from genomic data. Read moreRead less
Shape-shifting birds: a novel consequence of climate change. This project aims to identify which species are affected by climate change, and whether these changes in their ecology enhance or decrease fitness and survival. Climate change is having drastic effects on animal biology, threatening many species. Recent data suggest that changes in body shape (the size of appendages) is one such effect. By studying the bills and legs of birds this project aims to investigate changes in body shape as a ....Shape-shifting birds: a novel consequence of climate change. This project aims to identify which species are affected by climate change, and whether these changes in their ecology enhance or decrease fitness and survival. Climate change is having drastic effects on animal biology, threatening many species. Recent data suggest that changes in body shape (the size of appendages) is one such effect. By studying the bills and legs of birds this project aims to investigate changes in body shape as a biological response to climate change. This project will model the predicted consequences of changes in body shape on population trends in Australian birds, enabling the prediction of which species are most threatened by climate change, and helping inform conservation priorities.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE220101296
Funder
Australian Research Council
Funding Amount
$397,908.00
Summary
Diving into deep-time: macroevolutionary patterns of aquatic tetrapods. This project aims to compare and contrast the broad-scale evolutionary patterns of the disparate lineages of aquatic tetrapod (e.g. whales, penguins, plesiosaurs). This project expects to generate new knowledge by utilising cutting-edge methods from several fields, e.g. three-dimensional scans, phylogenetic comparative methods and functional morphology. Expected outcomes include multiple high-quality publications and the dev ....Diving into deep-time: macroevolutionary patterns of aquatic tetrapods. This project aims to compare and contrast the broad-scale evolutionary patterns of the disparate lineages of aquatic tetrapod (e.g. whales, penguins, plesiosaurs). This project expects to generate new knowledge by utilising cutting-edge methods from several fields, e.g. three-dimensional scans, phylogenetic comparative methods and functional morphology. Expected outcomes include multiple high-quality publications and the development of new local and international collaborations. This will provide significant benefits, including revealing aquatic tetrapod evolution on an unprecedented scale and a better understanding of how some of Australia’s most iconic animals respond to global change, helping inform eco-tourism and conservation policies.Read moreRead less
Evolution at extremes: Macroevolutionary responses to harsh environments. The project seeks to investigate the capacity of iconic Australian plant groups (Eucalyptus, Acacia, Banksia, Grevillea, Hakea) to adapt to increases in extreme conditions. Australia presents many extreme conditions for plant survival, such as drought, heat, or salt-affected soils. Are some lineages better able to adapt and diversify in these conditions? This project aims to develop new methods to identify lineages most to ....Evolution at extremes: Macroevolutionary responses to harsh environments. The project seeks to investigate the capacity of iconic Australian plant groups (Eucalyptus, Acacia, Banksia, Grevillea, Hakea) to adapt to increases in extreme conditions. Australia presents many extreme conditions for plant survival, such as drought, heat, or salt-affected soils. Are some lineages better able to adapt and diversify in these conditions? This project aims to develop new methods to identify lineages most tolerant of extreme environments, detect enabling traits that contribute to stress resistance, and test whether plant assemblages in extreme environments are formed from colonisation by specialist tolerators, or by local species adapting. These methods may allow the prediction of species or communities best able to adapt to conditions expected under global environmental change.Read moreRead less
Testing links between genomic and morphological evolutionary rates. This project aims to identify, understand, and characterise patterns of evolutionary rates across different levels of biological variation. The project expects to generate knowledge about the tempo and mode of evolution by using a phylogenetic approach to test fundamental models of evolutionary rates, including the link between rates of genomic and morphological evolution. Expected outcomes of this project include detailed insig ....Testing links between genomic and morphological evolutionary rates. This project aims to identify, understand, and characterise patterns of evolutionary rates across different levels of biological variation. The project expects to generate knowledge about the tempo and mode of evolution by using a phylogenetic approach to test fundamental models of evolutionary rates, including the link between rates of genomic and morphological evolution. Expected outcomes of this project include detailed insights into the tempo and mode of macroevolution, better modelling of genomic and phenotypic evolution, and improved design of studies in evolutionary genomics. Benefits of the project include greater understanding of the evolutionary processes that have generated the diversity of the Australian biota.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE140100220
Funder
Australian Research Council
Funding Amount
$375,149.00
Summary
How do time, climate change and adaptation shape the assembly and evolution of a diverse continental biota? This project will use new statistical techniques for analysing patterns of biological diversification to test how time, environmental change and evolutionary adaptation shape the accumulation of biodiversity in a continental setting. A supermatrix of genetic and ecological data for Australia's most diverse terrestrial vertebrate group (lizards and snakes) will be compiled. This will allow ....How do time, climate change and adaptation shape the assembly and evolution of a diverse continental biota? This project will use new statistical techniques for analysing patterns of biological diversification to test how time, environmental change and evolutionary adaptation shape the accumulation of biodiversity in a continental setting. A supermatrix of genetic and ecological data for Australia's most diverse terrestrial vertebrate group (lizards and snakes) will be compiled. This will allow the testing of the macroevolutionary responses to key environmental changes through the Cainozoic (rapid climatic transgressions and aridification), the relationship between lineage age and species diversity and the effects of major ecological shifts on rates of speciation, extinction and morphological diversification.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE190100544
Funder
Australian Research Council
Funding Amount
$344,682.00
Summary
The drivers of genome evolution and diversification in marsupials. This project aims to investigate the impact of the four basic forces of evolution, mutation, selection, neutral drift, and gene flow, on the genome. Genome-scale data have a signature of these forces and extracting it would greatly improve the quality of evolutionary models fit to the data, but the framework to identify the evolutionary forces has not been developed. This project will develop tests for assessing the impact of the ....The drivers of genome evolution and diversification in marsupials. This project aims to investigate the impact of the four basic forces of evolution, mutation, selection, neutral drift, and gene flow, on the genome. Genome-scale data have a signature of these forces and extracting it would greatly improve the quality of evolutionary models fit to the data, but the framework to identify the evolutionary forces has not been developed. This project will develop tests for assessing the impact of the primary evolutionary forces on the genome, and test these methods using simulations. The new framework of genomic analysis will be disseminated through an intuitive software package, and will be used to estimate with unprecedented confidence the history of diversification and genome evolution of marsupials.Read moreRead less