Revealing the evolutionary and ecological dynamics of avian influenza virus. This project aims to understand how avian influenza virus (AIV) emerges, evolves and spreads in wild birds. AIV has the potential to devastate the poultry industry and cause human pandemics, but the factors that shape the genetic diversity of AIV in its wild bird reservoir are poorly understood. The project plans to combine genomic, ecological and phylogenetic approaches to reveal key aspects of AIV evolution, as well a ....Revealing the evolutionary and ecological dynamics of avian influenza virus. This project aims to understand how avian influenza virus (AIV) emerges, evolves and spreads in wild birds. AIV has the potential to devastate the poultry industry and cause human pandemics, but the factors that shape the genetic diversity of AIV in its wild bird reservoir are poorly understood. The project plans to combine genomic, ecological and phylogenetic approaches to reveal key aspects of AIV evolution, as well as the risk for future viral emergence. Using sampling sites in Australia and Antarctica, it plans to investigate AIV diversity, the evolutionary dynamics of AIV in wild birds and poultry, and the role played by environmental transmission in AIV ecology.Read moreRead less
Understanding fungal diversity and functioning in forest soils using molecular and stable isotope approaches. The project aims to investigate fungal community structure and functioning in forest soils using novel molecular, stable isotope and physiological approaches. This will provide new insights into the linkage between diversity and functioning in forest soil fungal communities and the importance of these organisms in ecosystem processes. In addition, this pioneering research will facilitate ....Understanding fungal diversity and functioning in forest soils using molecular and stable isotope approaches. The project aims to investigate fungal community structure and functioning in forest soils using novel molecular, stable isotope and physiological approaches. This will provide new insights into the linkage between diversity and functioning in forest soil fungal communities and the importance of these organisms in ecosystem processes. In addition, this pioneering research will facilitate development and refinement of methodologies that will pave the way for future investigations of fungal ecology. The on-going collaboration will produce high quality joint publications and provide significant opportunities for early career researchers to gain international experience in a dynamic research environment.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE150100408
Funder
Australian Research Council
Funding Amount
$393,416.00
Summary
Understanding plant:fungal communication to increase plant productivity. Relationships between mutualistic fungi and plants are exploited as they foster plant productivity and vigour. One significant problem facing the agro-forestry and agricultural industries is that the ability of beneficial fungi to colonise plant hosts is highly dependent on the genetic background of the host. Ultimately, this means that if fungal inoculants are not matched with the appropriate plant host, maximal benefits f ....Understanding plant:fungal communication to increase plant productivity. Relationships between mutualistic fungi and plants are exploited as they foster plant productivity and vigour. One significant problem facing the agro-forestry and agricultural industries is that the ability of beneficial fungi to colonise plant hosts is highly dependent on the genetic background of the host. Ultimately, this means that if fungal inoculants are not matched with the appropriate plant host, maximal benefits from these relationships are not achieved. This project aims to identify the first genetic markers to be used for matching plants with appropriate fungal isolates, thereby guaranteeing optimal plant performance. This will add a critical component to the global effort of increasing the productivity of our natural resources.Read moreRead less
Factors controlling ectomycorrhizal contributions to plant N nutrition. This project aims to define the mechanistic link between nitrogen metabolism in symbiotic ectomycorrhizal fungi and its effect on the quantity of nitrogen shared with a plant host. Using a genetically diverse population of a key Australian fungal species, the project expects to uncover genetic features related to nitrogen metabolism that correlate to improved support of plant nutrition. Expected outcomes include better under ....Factors controlling ectomycorrhizal contributions to plant N nutrition. This project aims to define the mechanistic link between nitrogen metabolism in symbiotic ectomycorrhizal fungi and its effect on the quantity of nitrogen shared with a plant host. Using a genetically diverse population of a key Australian fungal species, the project expects to uncover genetic features related to nitrogen metabolism that correlate to improved support of plant nutrition. Expected outcomes include better understanding of plant-microbe interactions, groundwork for tools to better model the role of fungi in soil nutrient cycling and guidelines for plant:fungal pairings in reforestation practices. Overall, these should provide significant benefit to the global effort in understanding the role of soil microbes in plant nutrition.Read moreRead less
Characterising controls of carbon flow from trees into mycorrhizal fungi. This project aims to improve our understanding of below-ground carbon sequestration. A significant portion of plant photosynthate is shuttled to root-associated mutualistic ectomycorrhizal fungi in forest ecosystems. Therefore, fungal partners of forest trees are valuable carbon sinks. One problem impeding below-ground carbon accounting in forest soils is a lack of understanding concerning the genetic control of how photos ....Characterising controls of carbon flow from trees into mycorrhizal fungi. This project aims to improve our understanding of below-ground carbon sequestration. A significant portion of plant photosynthate is shuttled to root-associated mutualistic ectomycorrhizal fungi in forest ecosystems. Therefore, fungal partners of forest trees are valuable carbon sinks. One problem impeding below-ground carbon accounting in forest soils is a lack of understanding concerning the genetic control of how photosynthetically fixed sugars are passed to root-associated microbes. This project aims to identify and characterise the sugar transporters that shuttle carbon in ectomycorrhizal plant–fungal interactions and investigate how these are affected by elevated carbon dioxide. It may also identify isolates of mutualistic fungi that could be paired with eucalypt hosts to maximise carbon sequestration and forest productivity.Read moreRead less
Microbial junk food: developing synthetic platforms for plastic degradation. This project aims to establish the genetic basis of polyethelene biodegradation (PED) by microbes from the gut microbiome of plastic-eating caterpillars. It will transform the active microbial PED genes into carefully designed synthetic microbes for efficient, safe and large-scale PED. The project will combine innovative functional microbial genetic tools and synthetic biology techniques with solid biochemistry and bioi ....Microbial junk food: developing synthetic platforms for plastic degradation. This project aims to establish the genetic basis of polyethelene biodegradation (PED) by microbes from the gut microbiome of plastic-eating caterpillars. It will transform the active microbial PED genes into carefully designed synthetic microbes for efficient, safe and large-scale PED. The project will combine innovative functional microbial genetic tools and synthetic biology techniques with solid biochemistry and bioinformatics to produce translatable synthetic platforms containing key genes optimised for efficient PE waste removal. The outcomes will have the potential to transform the relative ineffective and expensive current methods for PE disposal into flexible, cost-effective and sustainable solutions applicable to multiple sectors.Read moreRead less
Switching partners: a driving force for tree productivity in a changing environment? Eucalypts take part in a mutually beneficial association with diverse communities of mycorrhizal fungi to satisfy nutrient demands. The fungi that eucalypts interact with change as they grow but the reasons for this shift are not known. To improve forestry management strategies, the project will determine why and how this shift occurs.
Structural analysis and functional inactivation of bacterial transcription complexes. RNA polymerase is an essential enzyme in all living cells. Its role is to convert the genetic information stored in genes into a message that can be converted into protein. As such, the bacterial RNA polymerase represents an ideal target for the development of new antibiotics which will be important in maintaining the health of the Australian community and also in protecting the community from the very real thr ....Structural analysis and functional inactivation of bacterial transcription complexes. RNA polymerase is an essential enzyme in all living cells. Its role is to convert the genetic information stored in genes into a message that can be converted into protein. As such, the bacterial RNA polymerase represents an ideal target for the development of new antibiotics which will be important in maintaining the health of the Australian community and also in protecting the community from the very real threat of bioterrorism organisms such as anthrax. This project is designed to identify molecules for development as new antibiotics that are effective against RNA polymerase.Read moreRead less
THE BIOLOGY OF COLD ADAPTED EXTREMOPHILES: AN INTEGRATED GENOMIC-PROTEIN ANALYSIS APPROACH. Extremophiles are microorganisms that can thrive in otherwise inhospitable environments. Most extremophiles are Archaea; an order of life separate from Bacteria and Eucaryotes. The project will generate the first genome sequence that was initiated in Australia, and the first genome sequence of any cold adapted organism. Associated functional studies include global analyses of protein expression (proteo ....THE BIOLOGY OF COLD ADAPTED EXTREMOPHILES: AN INTEGRATED GENOMIC-PROTEIN ANALYSIS APPROACH. Extremophiles are microorganisms that can thrive in otherwise inhospitable environments. Most extremophiles are Archaea; an order of life separate from Bacteria and Eucaryotes. The project will generate the first genome sequence that was initiated in Australia, and the first genome sequence of any cold adapted organism. Associated functional studies include global analyses of protein expression (proteomics) and mRNA expression using micro-arrays, and work targeted at RNA binding proteins and protein folding systems involved in the thermally sensitive process of protein synthesis. The nature and scope of the work will impact on fundamental cellular processes and provide enormous innovative biotechnological potential.Read moreRead less
Structure function analysis of the NusA-RNA polymerase interaction. Genes must be turned on at the right time, at the correct level in the appropriate cell in all organisms. This project will determine the role of an essential component of the process in bacteria called NusA. The results will apply to bacteria as well as higher organisms, and also have the potential to identify a new antibiotic target.