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Optimising disease surveillance to support decision-making. COVID-19 has demonstrated the critical role of epidemic data and analytics in guiding government response to pandemic threats, reducing disease and saving lives. The demand for epidemic analytics for response to threats of national significance will only grow. The goals of this project are to 1) determine the combination(s) of surveillance methods that provide the most useful data for epidemic analysis and 2) translate these findings in ....Optimising disease surveillance to support decision-making. COVID-19 has demonstrated the critical role of epidemic data and analytics in guiding government response to pandemic threats, reducing disease and saving lives. The demand for epidemic analytics for response to threats of national significance will only grow. The goals of this project are to 1) determine the combination(s) of surveillance methods that provide the most useful data for epidemic analysis and 2) translate these findings into the blueprint for a next-generation infectious disease surveillance system for Australia. We will use a simulation-evaluation approach, coupling methods from infectious disease modelling with those from information theory optimal design. Outcomes will enable more tailored and effective pandemic response.Read moreRead less
Innovative approaches to understanding and limiting the public health risks of Cryptosporidium and Giardia in animals in Australian catchments. Sophisticated molecular typing and modelling will be used to determine if chlorine-resistant parasites in animals in catchments are responsible for infection in humans. Improved catchment management and risk mitigation strategies will be developed during this project, which will make a substantial contribution to the provision of safe drinking water acro ....Innovative approaches to understanding and limiting the public health risks of Cryptosporidium and Giardia in animals in Australian catchments. Sophisticated molecular typing and modelling will be used to determine if chlorine-resistant parasites in animals in catchments are responsible for infection in humans. Improved catchment management and risk mitigation strategies will be developed during this project, which will make a substantial contribution to the provision of safe drinking water across Australia.Read moreRead less
Do insect-specific flaviviruses regulate the transmission of mosquito-borne diseases in Australia? Mosquito-borne viral diseases such as dengue occur in Australia. The research team recently discovered related viruses in mosquitoes from Darwin that do not infect humans, but may inhibit the spread of viral diseases by mosquitoes. This project will investigate the life cycles of these new viruses to understand how they affect the spread of viral diseases by mosquitoes.
Revealing the evolutionary and ecological dynamics of avian influenza virus. This project aims to understand how avian influenza virus (AIV) emerges, evolves and spreads in wild birds. AIV has the potential to devastate the poultry industry and cause human pandemics, but the factors that shape the genetic diversity of AIV in its wild bird reservoir are poorly understood. The project plans to combine genomic, ecological and phylogenetic approaches to reveal key aspects of AIV evolution, as well a ....Revealing the evolutionary and ecological dynamics of avian influenza virus. This project aims to understand how avian influenza virus (AIV) emerges, evolves and spreads in wild birds. AIV has the potential to devastate the poultry industry and cause human pandemics, but the factors that shape the genetic diversity of AIV in its wild bird reservoir are poorly understood. The project plans to combine genomic, ecological and phylogenetic approaches to reveal key aspects of AIV evolution, as well as the risk for future viral emergence. Using sampling sites in Australia and Antarctica, it plans to investigate AIV diversity, the evolutionary dynamics of AIV in wild birds and poultry, and the role played by environmental transmission in AIV ecology.Read moreRead less
Troublesome ticks: a new molecular toolkit to investigate zoonotic tick-borne pathogens in Australia. This project will use the latest molecular diagnostic techniques to address unanswered questions about potential tick-transmitted diseases of humans and companion animals in Australia. The study will identify 'hot-spots' for tick-borne pathogens, identify areas of potential risk for humans, and investigate vector-host-pathogen interactions nationwide.
Ecology and transmission of tick-borne disease in Australia. Ecology and transmission of tick-borne disease in Australia. This project aims to determine the bacterial, protozoal and viral biodiversity in wildlife ticks and their native mammal hosts, and provide new information about the biology and transmission dynamics of these microorganisms and their potential to cause disease in wildlife, domesticated animals and humans. Anticipated outcomes are improved diagnostic tests and management proto ....Ecology and transmission of tick-borne disease in Australia. Ecology and transmission of tick-borne disease in Australia. This project aims to determine the bacterial, protozoal and viral biodiversity in wildlife ticks and their native mammal hosts, and provide new information about the biology and transmission dynamics of these microorganisms and their potential to cause disease in wildlife, domesticated animals and humans. Anticipated outcomes are improved diagnostic tests and management protocols for tick-borne disease in Australia.Read moreRead less
Understanding mutation and genetic reassortment in viruses: new mathematical models of viral dynamics and evolution. This project aims to understand how evolutionary processes and ecological conditions combine to ignite and sustain viral epidemics. Using novel mathematical models and statistical methods we will study the manner in which viral genes mutate and are recombined, as well as the rates of these important forces.
Discovery Early Career Researcher Award - Grant ID: DE230100085
Funder
Australian Research Council
Funding Amount
$440,954.00
Summary
Forensic genomic toolkit for tracking the illegal wildlife trade. This project aims to analyse the illegal parrot trade by utilising conservation genomic approaches. The project will reveal wildlife trade routes in South-east Asia by developing cutting-edge forensic genomic techniques and criminological methods. Expected outcomes of this project include new field-deployable sequencing technology to provide in-situ genetic information for identifying the taxonomy and provenance of confiscated spe ....Forensic genomic toolkit for tracking the illegal wildlife trade. This project aims to analyse the illegal parrot trade by utilising conservation genomic approaches. The project will reveal wildlife trade routes in South-east Asia by developing cutting-edge forensic genomic techniques and criminological methods. Expected outcomes of this project include new field-deployable sequencing technology to provide in-situ genetic information for identifying the taxonomy and provenance of confiscated specimens, and a first ever genetic database of traded wildlife. The project will facilitate important countermeasures to the illegal wildlife trade including confiscation, reintroduction, improved law enforcement, and education for better biodiversity outcomes in our region.Read moreRead less
Modulation of air-conditioning settings to destroy respiratory viruses. This project aims to prove that manipulating the ambient humidity can rapidly degrade airborne viruses. The relationship between ambient humidity and airborne infection is poorly understood for viral pathogens including influenza and the common cold. The project will prove that indoor environmental conditions can be easily manipulated to kill airborne viruses. The findings will be used to develop indoor air humidity control ....Modulation of air-conditioning settings to destroy respiratory viruses. This project aims to prove that manipulating the ambient humidity can rapidly degrade airborne viruses. The relationship between ambient humidity and airborne infection is poorly understood for viral pathogens including influenza and the common cold. The project will prove that indoor environmental conditions can be easily manipulated to kill airborne viruses. The findings will be used to develop indoor air humidity control guidelines targeting the vulnerabilities of the viruses to minimise airborne infection.Read moreRead less
Molecular dissection of malaria parasite motility and host-cell invasion across the lifecycle. Malaria parasites move in a unique way, gliding across cell surfaces and infecting host cells using a unique molecular motor. This research aims to understand the molecular mechanics behind parasite movement and use this to develop novel drugs that might throw a spanner in the parasite motor, blocking movement and thereby preventing malaria disease.